RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SLC27A3Q5K4L6 730 aa29.65■■■□□ 2.34
C9orf3-209ENST00000460573 RTF1Q92541 710 aaKnown RBP29.65■■■□□ 2.34
C9orf3-209ENST00000460573 CABP4P57796 275 aa29.64■■■□□ 2.34
C9orf3-209ENST00000460573 MIER1Q8N108 512 aa29.64■■■□□ 2.34
C9orf3-209ENST00000460573 LGR6Q9HBX8 967 aa29.64■■■□□ 2.34
C9orf3-209ENST00000460573 SCN11AQ9UI33 1791 aa29.63■■■□□ 2.33
C9orf3-209ENST00000460573 ATF5Q9Y2D1 282 aaPredicted RBP29.63■■■□□ 2.33
C9orf3-209ENST00000460573 ADAMTS7Q9UKP4 1686 aa29.63■■■□□ 2.33
C9orf3-209ENST00000460573 PIGBQ92521 554 aa29.62■■■□□ 2.33
C9orf3-209ENST00000460573 PDGFDQ9GZP0 370 aaPredicted RBP29.62■■■□□ 2.33
C9orf3-209ENST00000460573 ITGB4P16144 1822 aa29.61■■■□□ 2.33
C9orf3-209ENST00000460573 TMPOP42166 694 aaKnown RBP29.61■■■□□ 2.33
C9orf3-209ENST00000460573 IL17REQ8NFR9 667 aa29.6■■■□□ 2.33
C9orf3-209ENST00000460573 SLC52A2Q9HAB3 445 aa29.6■■■□□ 2.33
C9orf3-209ENST00000460573 RIPK4P57078 832 aa29.59■■■□□ 2.33
C9orf3-209ENST00000460573 LMOD3Q0VAK6 560 aa29.59■■■□□ 2.33
C9orf3-209ENST00000460573 FAM9BQ8IZU0 186 aa29.59■■■□□ 2.33
C9orf3-209ENST00000460573 SMARCC1Q92922 1105 aaPredicted RBP29.59■■■□□ 2.33
C9orf3-209ENST00000460573 CEMIPQ8WUJ3 1361 aa29.59■■■□□ 2.33
C9orf3-209ENST00000460573 PAPPAQ13219 1627 aa29.58■■■□□ 2.33
C9orf3-209ENST00000460573 NFATC2IPQ8NCF5 419 aa29.58■■■□□ 2.33
C9orf3-209ENST00000460573 MTFR1LQ9H019 292 aa29.58■■■□□ 2.33
C9orf3-209ENST00000460573 LRRC4BQ9NT99 713 aa29.58■■■□□ 2.33
C9orf3-209ENST00000460573 MRC1P22897 1456 aa29.57■■■□□ 2.32
C9orf3-209ENST00000460573 TEFQ10587 303 aa29.57■■■□□ 2.32
C9orf3-209ENST00000460573 CCNL1Q9UK58 526 aaPredicted RBP29.57■■■□□ 2.32
C9orf3-209ENST00000460573 VIRMAQ69YN4 1812 aaKnown RBP29.55■■■□□ 2.32
C9orf3-209ENST00000460573 ZNF827Q17R98 1081 aa29.55■■■□□ 2.32
C9orf3-209ENST00000460573 TFCP2L1Q9NZI6 479 aa29.55■■■□□ 2.32
C9orf3-209ENST00000460573 DLG5Q8TDM6 1919 aa29.55■■■□□ 2.32
C9orf3-209ENST00000460573 LY75O60449 1722 aa29.54■■■□□ 2.32
C9orf3-209ENST00000460573 APAF1O14727 1248 aa29.54■■■□□ 2.32
C9orf3-209ENST00000460573 MCM10Q7L590 875 aa29.54■■■□□ 2.32
C9orf3-209ENST00000460573 KCNQ4P56696 695 aa29.53■■■□□ 2.32
C9orf3-209ENST00000460573 HMGB2P26583 209 aaKnown RBP29.51■■■□□ 2.31
C9orf3-209ENST00000460573 NEUROD2Q15784 382 aa29.51■■■□□ 2.31
C9orf3-209ENST00000460573 NCBP3Q53F19 620 aaKnown RBP29.51■■■□□ 2.31
C9orf3-209ENST00000460573 RRP7AQ9Y3A4 280 aaKnown RBP29.51■■■□□ 2.31
C9orf3-209ENST00000460573 PALLDQ8WX93 1383 aa29.51■■■□□ 2.31
C9orf3-209ENST00000460573 DCTN1Q14203 1278 aa29.5■■■□□ 2.31
C9orf3-209ENST00000460573 ATG3Q9NT62 314 aa29.5■■■□□ 2.31
C9orf3-209ENST00000460573 ASAP1Q9ULH1 1129 aa29.5■■■□□ 2.31
C9orf3-209ENST00000460573 MSH5O43196 834 aa29.49■■■□□ 2.31
C9orf3-209ENST00000460573 AKT1S1Q96B36 256 aa29.48■■■□□ 2.31
C9orf3-209ENST00000460573 QSER1Q2KHR3 1735 aa29.48■■■□□ 2.31
C9orf3-209ENST00000460573 PTGER2P43116 358 aa29.47■■■□□ 2.31
C9orf3-209ENST00000460573 POLD1P28340 1107 aa29.46■■■□□ 2.31
C9orf3-209ENST00000460573 TAF7Q15545 349 aaPredicted RBP29.46■■■□□ 2.31
C9orf3-209ENST00000460573 TRIM35Q9UPQ4 493 aa29.46■■■□□ 2.31
C9orf3-209ENST00000460573 SIPA1L3O60292 1781 aaPredicted RBP29.45■■■□□ 2.31
C9orf3-209ENST00000460573 NGEFQ8N5V2 710 aa29.45■■■□□ 2.31
C9orf3-209ENST00000460573 BTBD11A6QL63 1104 aa29.44■■■□□ 2.3
C9orf3-209ENST00000460573 KLHL34Q8N239 644 aa29.44■■■□□ 2.3
C9orf3-209ENST00000460573 SLC16A10Q8TF71 515 aa29.44■■■□□ 2.3
C9orf3-209ENST00000460573 ARXQ96QS3 562 aa29.44■■■□□ 2.3
C9orf3-209ENST00000460573 TUBGCP6Q96RT7 1819 aa29.43■■■□□ 2.3
C9orf3-209ENST00000460573 CCDC27Q2M243 656 aa29.43■■■□□ 2.3
C9orf3-209ENST00000460573 C5P01031 1676 aa29.42■■■□□ 2.3
C9orf3-209ENST00000460573 LOC102724428A0A0B4J2F2 783 aa29.42■■■□□ 2.3
C9orf3-209ENST00000460573 SIK1P57059 783 aa29.42■■■□□ 2.3
C9orf3-209ENST00000460573 TTC5Q8N0Z6 440 aa29.42■■■□□ 2.3
C9orf3-209ENST00000460573 FHDC1Q9C0D6 1143 aaPredicted RBP29.42■■■□□ 2.3
C9orf3-209ENST00000460573 PNPLA7Q6ZV29 1317 aa29.42■■■□□ 2.3
C9orf3-209ENST00000460573 ZNF790Q6PG37 636 aa29.41■■■□□ 2.3
C9orf3-209ENST00000460573 THUMPD2Q9BTF0 503 aaKnown RBP29.41■■■□□ 2.3
C9orf3-209ENST00000460573 BABAM1Q9NWV8 329 aa29.41■■■□□ 2.3
C9orf3-209ENST00000460573 CALD1Q05682 793 aaKnown RBP29.4■■■□□ 2.3
C9orf3-209ENST00000460573 SLC39A6Q13433 755 aa29.4■■■□□ 2.3
C9orf3-209ENST00000460573 RBM42Q9BTD8 480 aaKnown RBP29.4■■■□□ 2.3
C9orf3-209ENST00000460573 PTCD1O75127 700 aaKnown RBP29.37■■■□□ 2.29
C9orf3-209ENST00000460573 ATP6V1AP38606 617 aa29.37■■■□□ 2.29
C9orf3-209ENST00000460573 SYT17Q9BSW7 474 aa29.37■■■□□ 2.29
C9orf3-209ENST00000460573 ZNF831Q5JPB2 1677 aa29.37■■■□□ 2.29
C9orf3-209ENST00000460573 YY1P25490 414 aa29.36■■■□□ 2.29
C9orf3-209ENST00000460573 AK7Q96M32 723 aa29.36■■■□□ 2.29
C9orf3-209ENST00000460573 VSIG10Q8N0Z9 540 aa29.35■■■□□ 2.29
C9orf3-209ENST00000460573 SGIP1Q9BQI5 828 aa29.35■■■□□ 2.29
C9orf3-209ENST00000460573 TAF1LQ8IZX4 1826 aa29.35■■■□□ 2.29
C9orf3-209ENST00000460573 FMNL2Q96PY5 1086 aa29.34■■■□□ 2.29
C9orf3-209ENST00000460573 WWC1Q8IX03 1113 aa29.33■■■□□ 2.29
C9orf3-209ENST00000460573 FLAD1Q8NFF5 587 aa29.33■■■□□ 2.29
C9orf3-209ENST00000460573 KCPQ6ZWJ8 1503 aa29.33■■■□□ 2.29
C9orf3-209ENST00000460573 UBR2Q8IWV8 1755 aa29.33■■■□□ 2.29
C9orf3-209ENST00000460573 SLC4A9Q96Q91 983 aa29.32■■■□□ 2.28
C9orf3-209ENST00000460573 ZNF496Q96IT1 587 aaPredicted RBP29.31■■■□□ 2.28
C9orf3-209ENST00000460573 CFAP44Q96MT7 982 aa29.31■■■□□ 2.28
C9orf3-209ENST00000460573 MIS18AQ9NYP9 233 aa29.31■■■□□ 2.28
C9orf3-209ENST00000460573 TSPYL4Q9UJ04 414 aa29.31■■■□□ 2.28
C9orf3-209ENST00000460573 CHL1O00533 1208 aa29.3■■■□□ 2.28
C9orf3-209ENST00000460573 C4BP0C0L5 1744 aa29.3■■■□□ 2.28
C9orf3-209ENST00000460573 CICQ96RK0 1608 aaPredicted RBP29.3■■■□□ 2.28
C9orf3-209ENST00000460573 HEG1Q9ULI3 1381 aa29.29■■■□□ 2.28
C9orf3-209ENST00000460573 KCNQ3O43525 872 aa29.29■■■□□ 2.28
C9orf3-209ENST00000460573 GNAI1P63096 354 aa29.29■■■□□ 2.28
C9orf3-209ENST00000460573 ITPK1Q13572 414 aa29.29■■■□□ 2.28
C9orf3-209ENST00000460573 COL23A1Q86Y22 540 aaPredicted RBP29.29■■■□□ 2.28
C9orf3-209ENST00000460573 TEX13AQ9BXU3 409 aaPredicted RBP29.29■■■□□ 2.28
C9orf3-209ENST00000460573 IFT57Q9NWB7 429 aa29.29■■■□□ 2.28
C9orf3-209ENST00000460573 WDR63Q8IWG1 891 aa29.28■■■□□ 2.28
C9orf3-209ENST00000460573 KDM3BQ7LBC6 1761 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms