RNA–Protein interactions for RNA: ENST00000460504.3

RN7SL788P-201, Transcript of RNA, 7SL, cytoplasmic 788, pseudogene, humanhuman

BASIC

Gene RN7SL788P, Length 316 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL788P-201ENST00000460504 NFATC2IPQ8NCF5 419 aa18.45■□□□□ 0.54
RN7SL788P-201ENST00000460504 LMOD3Q0VAK6 560 aa18.44■□□□□ 0.54
RN7SL788P-201ENST00000460504 SIPA1L3O60292 1781 aaPredicted RBP18.43■□□□□ 0.54
RN7SL788P-201ENST00000460504 TEFQ10587 303 aa18.43■□□□□ 0.54
RN7SL788P-201ENST00000460504 TRIM35Q9UPQ4 493 aa18.43■□□□□ 0.54
RN7SL788P-201ENST00000460504 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
RN7SL788P-201ENST00000460504 DEFB132Q7Z7B7 95 aa18.42■□□□□ 0.54
RN7SL788P-201ENST00000460504 RGPD3A6NKT7 1758 aaPredicted RBP18.42■□□□□ 0.54
RN7SL788P-201ENST00000460504 RGPD4Q7Z3J3 1758 aa18.42■□□□□ 0.54
RN7SL788P-201ENST00000460504 EN1Q05925 392 aaPredicted RBP18.41■□□□□ 0.54
RN7SL788P-201ENST00000460504 SMARCC1Q92922 1105 aaPredicted RBP18.41■□□□□ 0.54
RN7SL788P-201ENST00000460504 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
RN7SL788P-201ENST00000460504 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
RN7SL788P-201ENST00000460504 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
RN7SL788P-201ENST00000460504 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.53
RN7SL788P-201ENST00000460504 LY75O60449 1722 aa18.39■□□□□ 0.53
RN7SL788P-201ENST00000460504 TAF7Q15545 349 aaPredicted RBP18.38■□□□□ 0.53
RN7SL788P-201ENST00000460504 EZH2Q15910 746 aaKnown RBP18.38■□□□□ 0.53
RN7SL788P-201ENST00000460504 CCDC27Q2M243 656 aa18.38■□□□□ 0.53
RN7SL788P-201ENST00000460504 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
RN7SL788P-201ENST00000460504 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
RN7SL788P-201ENST00000460504 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
RN7SL788P-201ENST00000460504 PROM2Q8N271 834 aa18.37■□□□□ 0.53
RN7SL788P-201ENST00000460504 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
RN7SL788P-201ENST00000460504 BTBD11A6QL63 1104 aa18.36■□□□□ 0.53
RN7SL788P-201ENST00000460504 SLC39A6Q13433 755 aa18.36■□□□□ 0.53
RN7SL788P-201ENST00000460504 TXNRD1Q16881 649 aa18.36■□□□□ 0.53
RN7SL788P-201ENST00000460504 RREB1Q92766 1687 aa18.35■□□□□ 0.53
RN7SL788P-201ENST00000460504 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
RN7SL788P-201ENST00000460504 SLC27A3Q5K4L6 730 aa18.34■□□□□ 0.53
RN7SL788P-201ENST00000460504 ZNF790Q6PG37 636 aa18.34■□□□□ 0.53
RN7SL788P-201ENST00000460504 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.53
RN7SL788P-201ENST00000460504 LOC102724428A0A0B4J2F2 783 aa18.33■□□□□ 0.52
RN7SL788P-201ENST00000460504 SIK1P57059 783 aa18.33■□□□□ 0.52
RN7SL788P-201ENST00000460504 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.52
RN7SL788P-201ENST00000460504 TTC5Q8N0Z6 440 aa18.33■□□□□ 0.52
RN7SL788P-201ENST00000460504 BABAM1Q9NWV8 329 aa18.33■□□□□ 0.52
RN7SL788P-201ENST00000460504 SALL2Q9Y467 1007 aaPredicted RBP18.33■□□□□ 0.52
RN7SL788P-201ENST00000460504 ZNF831Q5JPB2 1677 aa18.32■□□□□ 0.52
RN7SL788P-201ENST00000460504 RBM42Q9BTD8 480 aaKnown RBP18.32■□□□□ 0.52
RN7SL788P-201ENST00000460504 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
RN7SL788P-201ENST00000460504 MIS18AQ9NYP9 233 aa18.32■□□□□ 0.52
RN7SL788P-201ENST00000460504 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
RN7SL788P-201ENST00000460504 KCPQ6ZWJ8 1503 aa18.32■□□□□ 0.52
RN7SL788P-201ENST00000460504 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
RN7SL788P-201ENST00000460504 KCNQ3O43525 872 aa18.31■□□□□ 0.52
RN7SL788P-201ENST00000460504 PTCD1O75127 700 aaKnown RBP18.31■□□□□ 0.52
RN7SL788P-201ENST00000460504 SLC4A9Q96Q91 983 aa18.31■□□□□ 0.52
RN7SL788P-201ENST00000460504 NUP188Q5SRE5 1749 aa18.31■□□□□ 0.52
RN7SL788P-201ENST00000460504 CHL1O00533 1208 aa18.3■□□□□ 0.52
RN7SL788P-201ENST00000460504 ZNF853P0CG23 659 aa18.3■□□□□ 0.52
RN7SL788P-201ENST00000460504 ATP6V1AP38606 617 aa18.3■□□□□ 0.52
RN7SL788P-201ENST00000460504 WDR63Q8IWG1 891 aa18.3■□□□□ 0.52
RN7SL788P-201ENST00000460504 CFAP44Q96MT7 982 aa18.3■□□□□ 0.52
RN7SL788P-201ENST00000460504 TAF1LQ8IZX4 1826 aa18.29■□□□□ 0.52
RN7SL788P-201ENST00000460504 HMGB2P26583 209 aaKnown RBP18.29■□□□□ 0.52
RN7SL788P-201ENST00000460504 KCNQ4P56696 695 aa18.29■□□□□ 0.52
RN7SL788P-201ENST00000460504 VSIG10Q8N0Z9 540 aa18.29■□□□□ 0.52
RN7SL788P-201ENST00000460504 ZNF496Q96IT1 587 aaPredicted RBP18.29■□□□□ 0.52
RN7SL788P-201ENST00000460504 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
RN7SL788P-201ENST00000460504 IFT57Q9NWB7 429 aa18.29■□□□□ 0.52
RN7SL788P-201ENST00000460504 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
RN7SL788P-201ENST00000460504 IL16Q14005 1332 aa18.28■□□□□ 0.52
RN7SL788P-201ENST00000460504 GNAI1P63096 354 aa18.28■□□□□ 0.52
RN7SL788P-201ENST00000460504 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
RN7SL788P-201ENST00000460504 CICQ96RK0 1608 aaPredicted RBP18.27■□□□□ 0.52
RN7SL788P-201ENST00000460504 ZNF521Q96K83 1311 aa18.27■□□□□ 0.52
RN7SL788P-201ENST00000460504 ITPK1Q13572 414 aa18.27■□□□□ 0.52
RN7SL788P-201ENST00000460504 C5P01031 1676 aa18.27■□□□□ 0.52
RN7SL788P-201ENST00000460504 HEG1Q9ULI3 1381 aa18.27■□□□□ 0.51
RN7SL788P-201ENST00000460504 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
RN7SL788P-201ENST00000460504 TJP1Q07157 1748 aa18.26■□□□□ 0.51
RN7SL788P-201ENST00000460504 LINC00116Q8NCU8 138 aa18.25■□□□□ 0.51
RN7SL788P-201ENST00000460504 MBIPQ9NS73 344 aa18.25■□□□□ 0.51
RN7SL788P-201ENST00000460504 COL5A3P25940 1745 aaPredicted RBP18.24■□□□□ 0.51
RN7SL788P-201ENST00000460504 NBPF14Q5TI25 921 aa18.24■□□□□ 0.51
RN7SL788P-201ENST00000460504 DNAJC10Q8IXB1 793 aa18.24■□□□□ 0.51
RN7SL788P-201ENST00000460504 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
RN7SL788P-201ENST00000460504 HNRNPUQ00839 825 aaKnown RBP eCLIP18.23■□□□□ 0.51
RN7SL788P-201ENST00000460504 AKT1S1Q96B36 256 aa18.23■□□□□ 0.51
RN7SL788P-201ENST00000460504 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
RN7SL788P-201ENST00000460504 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
RN7SL788P-201ENST00000460504 C4BP0C0L5 1744 aa18.23■□□□□ 0.51
RN7SL788P-201ENST00000460504 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
RN7SL788P-201ENST00000460504 CYP19A1P11511 503 aaPredicted RBP18.21■□□□□ 0.51
RN7SL788P-201ENST00000460504 SLC15A2Q16348 729 aa18.21■□□□□ 0.51
RN7SL788P-201ENST00000460504 ZNF827Q17R98 1081 aa18.21■□□□□ 0.51
RN7SL788P-201ENST00000460504 RC3H1Q5TC82 1133 aaKnown RBP18.21■□□□□ 0.51
RN7SL788P-201ENST00000460504 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
RN7SL788P-201ENST00000460504 STK32BQ9NY57 414 aa18.21■□□□□ 0.51
RN7SL788P-201ENST00000460504 MYH14Q7Z406 1995 aaKnown RBP18.21■□□□□ 0.5
RN7SL788P-201ENST00000460504 PRAMEF22A3QJZ6 481 aa18.2■□□□□ 0.5
RN7SL788P-201ENST00000460504 STARD3NLO95772 234 aa18.2■□□□□ 0.5
RN7SL788P-201ENST00000460504 GOLGA2Q08379 1002 aa18.2■□□□□ 0.5
RN7SL788P-201ENST00000460504 USP16Q9Y5T5 823 aa18.2■□□□□ 0.5
RN7SL788P-201ENST00000460504 CNTNAP4Q9C0A0 1308 aa18.2■□□□□ 0.5
RN7SL788P-201ENST00000460504 CRKLP46109 303 aaKnown RBP18.19■□□□□ 0.5
RN7SL788P-201ENST00000460504 TSR2Q969E8 191 aaKnown RBP18.19■□□□□ 0.5
RN7SL788P-201ENST00000460504 LAMB4A4D0S4 1761 aa18.18■□□□□ 0.5
RN7SL788P-201ENST00000460504 KRT24Q2M2I5 525 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms