RNA–Protein interactions for RNA: ENST00000460390.6

EXD3-202, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-202ENST00000460390 DLG5Q8TDM6 1919 aa25.17■■□□□ 1.62
EXD3-202ENST00000460390 CCER2I3L3R5 266 aa25.17■■□□□ 1.62
EXD3-202ENST00000460390 MTFR1LQ9H019 292 aa25.17■■□□□ 1.62
EXD3-202ENST00000460390 TMOD3Q9NYL9 352 aa25.16■■□□□ 1.62
EXD3-202ENST00000460390 ADAMTS7Q9UKP4 1686 aa25.15■■□□□ 1.62
EXD3-202ENST00000460390 CCDC146Q8IYE0 955 aa25.15■■□□□ 1.62
EXD3-202ENST00000460390 RTF1Q92541 710 aaKnown RBP25.15■■□□□ 1.62
EXD3-202ENST00000460390 CABP4P57796 275 aa25.14■■□□□ 1.62
EXD3-202ENST00000460390 NFE2L2Q16236 605 aa25.14■■□□□ 1.62
EXD3-202ENST00000460390 RNMTO43148 476 aaKnown RBP25.13■■□□□ 1.61
EXD3-202ENST00000460390 PTGER2P43116 358 aa25.13■■□□□ 1.61
EXD3-202ENST00000460390 HTATSF1O43719 755 aaKnown RBP25.12■■□□□ 1.61
EXD3-202ENST00000460390 PAPPAQ13219 1627 aa25.12■■□□□ 1.61
EXD3-202ENST00000460390 LGR6Q9HBX8 967 aa25.12■■□□□ 1.61
EXD3-202ENST00000460390 PIGBQ92521 554 aa25.11■■□□□ 1.61
EXD3-202ENST00000460390 FHDC1Q9C0D6 1143 aaPredicted RBP25.11■■□□□ 1.61
EXD3-202ENST00000460390 MRC1P22897 1456 aa25.09■■□□□ 1.61
EXD3-202ENST00000460390 FAM9BQ8IZU0 186 aa25.09■■□□□ 1.61
EXD3-202ENST00000460390 MIER1Q8N108 512 aa25.09■■□□□ 1.61
EXD3-202ENST00000460390 SLC52A2Q9HAB3 445 aa25.09■■□□□ 1.61
EXD3-202ENST00000460390 TMPOP42166 694 aaKnown RBP25.08■■□□□ 1.61
EXD3-202ENST00000460390 RIPK4P57078 832 aa25.08■■□□□ 1.61
EXD3-202ENST00000460390 TEFQ10587 303 aa25.08■■□□□ 1.61
EXD3-202ENST00000460390 NFATC2IPQ8NCF5 419 aa25.08■■□□□ 1.61
EXD3-202ENST00000460390 IL17REQ8NFR9 667 aa25.08■■□□□ 1.61
EXD3-202ENST00000460390 SMARCC1Q92922 1105 aaPredicted RBP25.08■■□□□ 1.61
EXD3-202ENST00000460390 SYT17Q9BSW7 474 aa25.08■■□□□ 1.61
EXD3-202ENST00000460390 LMOD3Q0VAK6 560 aa25.07■■□□□ 1.6
EXD3-202ENST00000460390 LY75O60449 1722 aa25.06■■□□□ 1.6
EXD3-202ENST00000460390 CEMIPQ8WUJ3 1361 aa25.06■■□□□ 1.6
EXD3-202ENST00000460390 ARXQ96QS3 562 aa25.05■■□□□ 1.6
EXD3-202ENST00000460390 SIPA1L3O60292 1781 aaPredicted RBP25.05■■□□□ 1.6
EXD3-202ENST00000460390 NEUROD2Q15784 382 aa25.04■■□□□ 1.6
EXD3-202ENST00000460390 SLC27A3Q5K4L6 730 aa25.04■■□□□ 1.6
EXD3-202ENST00000460390 MCM10Q7L590 875 aa25.04■■□□□ 1.6
EXD3-202ENST00000460390 PALLDQ8WX93 1383 aa25.04■■□□□ 1.6
EXD3-202ENST00000460390 RRP7AQ9Y3A4 280 aaKnown RBP25.03■■□□□ 1.6
EXD3-202ENST00000460390 APAF1O14727 1248 aa25.03■■□□□ 1.6
EXD3-202ENST00000460390 QSER1Q2KHR3 1735 aa25.02■■□□□ 1.6
EXD3-202ENST00000460390 UTRNP46939 3433 aa25.02■■□□□ 1.6
EXD3-202ENST00000460390 DCTN1Q14203 1278 aa25.02■■□□□ 1.6
EXD3-202ENST00000460390 ZNF827Q17R98 1081 aa25.02■■□□□ 1.6
EXD3-202ENST00000460390 SGIP1Q9BQI5 828 aa25.02■■□□□ 1.6
EXD3-202ENST00000460390 ATG3Q9NT62 314 aa25.01■■□□□ 1.59
EXD3-202ENST00000460390 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
EXD3-202ENST00000460390 CHD4Q14839 1912 aa25■■□□□ 1.59
EXD3-202ENST00000460390 HMGB2P26583 209 aaKnown RBP25■■□□□ 1.59
EXD3-202ENST00000460390 LRRC4BQ9NT99 713 aa25■■□□□ 1.59
EXD3-202ENST00000460390 POLD1P28340 1107 aa24.99■■□□□ 1.59
EXD3-202ENST00000460390 KLHL34Q8N239 644 aa24.98■■□□□ 1.59
EXD3-202ENST00000460390 SLC16A10Q8TF71 515 aa24.98■■□□□ 1.59
EXD3-202ENST00000460390 CCNL1Q9UK58 526 aaPredicted RBP24.98■■□□□ 1.59
EXD3-202ENST00000460390 TFCP2L1Q9NZI6 479 aa24.97■■□□□ 1.59
EXD3-202ENST00000460390 BTBD11A6QL63 1104 aa24.96■■□□□ 1.59
EXD3-202ENST00000460390 TAF7Q15545 349 aaPredicted RBP24.96■■□□□ 1.59
EXD3-202ENST00000460390 TTC5Q8N0Z6 440 aa24.96■■□□□ 1.59
EXD3-202ENST00000460390 AKT1S1Q96B36 256 aa24.95■■□□□ 1.59
EXD3-202ENST00000460390 LOC102724428A0A0B4J2F2 783 aa24.95■■□□□ 1.58
EXD3-202ENST00000460390 SIK1P57059 783 aa24.95■■□□□ 1.58
EXD3-202ENST00000460390 ZNF784Q8NCA9 323 aaPredicted RBP24.95■■□□□ 1.58
EXD3-202ENST00000460390 RBM42Q9BTD8 480 aaKnown RBP24.95■■□□□ 1.58
EXD3-202ENST00000460390 THUMPD2Q9BTF0 503 aaKnown RBP24.95■■□□□ 1.58
EXD3-202ENST00000460390 TRIM35Q9UPQ4 493 aa24.95■■□□□ 1.58
EXD3-202ENST00000460390 ZNF831Q5JPB2 1677 aa24.94■■□□□ 1.58
EXD3-202ENST00000460390 UBR2Q8IWV8 1755 aa24.94■■□□□ 1.58
EXD3-202ENST00000460390 SLC39A6Q13433 755 aa24.94■■□□□ 1.58
EXD3-202ENST00000460390 TAF1LQ8IZX4 1826 aa24.93■■□□□ 1.58
EXD3-202ENST00000460390 TUBGCP6Q96RT7 1819 aa24.93■■□□□ 1.58
EXD3-202ENST00000460390 NCBP3Q53F19 620 aaKnown RBP24.93■■□□□ 1.58
EXD3-202ENST00000460390 ZNF790Q6PG37 636 aa24.93■■□□□ 1.58
EXD3-202ENST00000460390 C5P01031 1676 aa24.93■■□□□ 1.58
EXD3-202ENST00000460390 PTCD1O75127 700 aaKnown RBP24.92■■□□□ 1.58
EXD3-202ENST00000460390 ATP6V1AP38606 617 aa24.92■■□□□ 1.58
EXD3-202ENST00000460390 CALD1Q05682 793 aaKnown RBP24.92■■□□□ 1.58
EXD3-202ENST00000460390 GPR162Q16538 588 aa24.92■■□□□ 1.58
EXD3-202ENST00000460390 PNPLA7Q6ZV29 1317 aa24.92■■□□□ 1.58
EXD3-202ENST00000460390 NGEFQ8N5V2 710 aa24.91■■□□□ 1.58
EXD3-202ENST00000460390 CCDC27Q2M243 656 aa24.9■■□□□ 1.58
EXD3-202ENST00000460390 KDM3BQ7LBC6 1761 aa24.9■■□□□ 1.58
EXD3-202ENST00000460390 KCNQ4P56696 695 aa24.89■■□□□ 1.58
EXD3-202ENST00000460390 KCPQ6ZWJ8 1503 aa24.89■■□□□ 1.57
EXD3-202ENST00000460390 PELP1Q8IZL8 1130 aaKnown RBP24.88■■□□□ 1.57
EXD3-202ENST00000460390 BABAM1Q9NWV8 329 aa24.88■■□□□ 1.57
EXD3-202ENST00000460390 MSH5O43196 834 aa24.87■■□□□ 1.57
EXD3-202ENST00000460390 FMNL2Q96PY5 1086 aa24.87■■□□□ 1.57
EXD3-202ENST00000460390 CICQ96RK0 1608 aaPredicted RBP24.87■■□□□ 1.57
EXD3-202ENST00000460390 COL24A1Q17RW2 1714 aa24.87■■□□□ 1.57
EXD3-202ENST00000460390 VSIG10Q8N0Z9 540 aa24.86■■□□□ 1.57
EXD3-202ENST00000460390 SENP3-EIF4A1A0A087X0R7 540 aa24.86■■□□□ 1.57
EXD3-202ENST00000460390 MIS18AQ9NYP9 233 aa24.86■■□□□ 1.57
EXD3-202ENST00000460390 TSPYL4Q9UJ04 414 aa24.86■■□□□ 1.57
EXD3-202ENST00000460390 COL5A3P25940 1745 aaPredicted RBP24.85■■□□□ 1.57
EXD3-202ENST00000460390 ZNF496Q96IT1 587 aaPredicted RBP24.85■■□□□ 1.57
EXD3-202ENST00000460390 SLC4A9Q96Q91 983 aa24.85■■□□□ 1.57
EXD3-202ENST00000460390 SALL2Q9Y467 1007 aaPredicted RBP24.85■■□□□ 1.57
EXD3-202ENST00000460390 C4BP0C0L5 1744 aa24.85■■□□□ 1.57
EXD3-202ENST00000460390 TJP1Q07157 1748 aa24.85■■□□□ 1.57
EXD3-202ENST00000460390 ITPK1Q13572 414 aa24.84■■□□□ 1.57
EXD3-202ENST00000460390 WWC1Q8IX03 1113 aa24.84■■□□□ 1.57
EXD3-202ENST00000460390 LAS1LQ9Y4W2 734 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms