RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 PAPPAQ13219 1627 aa13.5□□□□□ -0.25
GARNL3-211ENST00000460176 RNMTO43148 476 aaKnown RBP13.49□□□□□ -0.25
GARNL3-211ENST00000460176 NEUROD2Q15784 382 aa13.49□□□□□ -0.25
GARNL3-211ENST00000460176 IL17REQ8NFR9 667 aa13.49□□□□□ -0.25
GARNL3-211ENST00000460176 LGR6Q9HBX8 967 aa13.49□□□□□ -0.25
GARNL3-211ENST00000460176 DCTN1Q14203 1278 aa13.48□□□□□ -0.25
GARNL3-211ENST00000460176 FAM196AQ6ZSG2 479 aa13.48□□□□□ -0.25
GARNL3-211ENST00000460176 MCM10Q7L590 875 aa13.48□□□□□ -0.25
GARNL3-211ENST00000460176 KDM3BQ7LBC6 1761 aa13.48□□□□□ -0.25
GARNL3-211ENST00000460176 LMOD3Q0VAK6 560 aa13.47□□□□□ -0.25
GARNL3-211ENST00000460176 CCDC27Q2M243 656 aa13.47□□□□□ -0.25
GARNL3-211ENST00000460176 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
GARNL3-211ENST00000460176 ACSBG1Q96GR2 724 aa13.47□□□□□ -0.25
GARNL3-211ENST00000460176 THUMPD2Q9BTF0 503 aaKnown RBP13.47□□□□□ -0.25
GARNL3-211ENST00000460176 UBR2Q8IWV8 1755 aa13.46□□□□□ -0.25
GARNL3-211ENST00000460176 ERVV-2B6SEH9 535 aa13.46□□□□□ -0.25
GARNL3-211ENST00000460176 PRIM1P49642 420 aaKnown RBP13.46□□□□□ -0.25
GARNL3-211ENST00000460176 ILDR2Q71H61 639 aa13.46□□□□□ -0.25
GARNL3-211ENST00000460176 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.26
GARNL3-211ENST00000460176 KCNQ2O43526 872 aa13.45□□□□□ -0.26
GARNL3-211ENST00000460176 PTF1AQ7RTS3 328 aa13.45□□□□□ -0.26
GARNL3-211ENST00000460176 NGEFQ8N5V2 710 aa13.45□□□□□ -0.26
GARNL3-211ENST00000460176 SLC52A2Q9HAB3 445 aa13.45□□□□□ -0.26
GARNL3-211ENST00000460176 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-211ENST00000460176 LY75O60449 1722 aa13.44□□□□□ -0.26
GARNL3-211ENST00000460176 WWC1Q8IX03 1113 aa13.44□□□□□ -0.26
GARNL3-211ENST00000460176 ZNF521Q96K83 1311 aa13.43□□□□□ -0.26
GARNL3-211ENST00000460176 RGPD3A6NKT7 1758 aaPredicted RBP13.43□□□□□ -0.26
GARNL3-211ENST00000460176 RGPD4Q7Z3J3 1758 aa13.43□□□□□ -0.26
GARNL3-211ENST00000460176 TRIM37O94972 964 aa13.43□□□□□ -0.26
GARNL3-211ENST00000460176 CABP4P57796 275 aa13.43□□□□□ -0.26
GARNL3-211ENST00000460176 HNRNPUQ00839 825 aaKnown RBP eCLIP13.43□□□□□ -0.26
GARNL3-211ENST00000460176 TEFQ10587 303 aa13.43□□□□□ -0.26
GARNL3-211ENST00000460176 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
GARNL3-211ENST00000460176 PIGBQ92521 554 aa13.43□□□□□ -0.26
GARNL3-211ENST00000460176 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
GARNL3-211ENST00000460176 TMOD3Q9NYL9 352 aa13.43□□□□□ -0.26
GARNL3-211ENST00000460176 SYTL4Q96C24 671 aaPredicted RBP13.42□□□□□ -0.26
GARNL3-211ENST00000460176 KCPQ6ZWJ8 1503 aa13.41□□□□□ -0.26
GARNL3-211ENST00000460176 EP400Q96L91 3159 aa13.41□□□□□ -0.26
GARNL3-211ENST00000460176 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
GARNL3-211ENST00000460176 CICQ96RK0 1608 aaPredicted RBP13.4□□□□□ -0.26
GARNL3-211ENST00000460176 TAF7Q15545 349 aaPredicted RBP13.4□□□□□ -0.26
GARNL3-211ENST00000460176 WDR63Q8IWG1 891 aa13.4□□□□□ -0.26
GARNL3-211ENST00000460176 IL16Q14005 1332 aa13.39□□□□□ -0.27
GARNL3-211ENST00000460176 TJP1Q07157 1748 aa13.39□□□□□ -0.27
GARNL3-211ENST00000460176 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
GARNL3-211ENST00000460176 CAPN15O75808 1086 aa13.39□□□□□ -0.27
GARNL3-211ENST00000460176 ZNF853P0CG23 659 aa13.39□□□□□ -0.27
GARNL3-211ENST00000460176 CALD1Q05682 793 aaKnown RBP13.39□□□□□ -0.27
GARNL3-211ENST00000460176 SPINK5Q9NQ38 1064 aaPredicted RBP13.39□□□□□ -0.27
GARNL3-211ENST00000460176 ATG3Q9NT62 314 aa13.39□□□□□ -0.27
GARNL3-211ENST00000460176 ASAP1Q9ULH1 1129 aa13.39□□□□□ -0.27
GARNL3-211ENST00000460176 C5P01031 1676 aa13.38□□□□□ -0.27
GARNL3-211ENST00000460176 RREB1Q92766 1687 aa13.38□□□□□ -0.27
GARNL3-211ENST00000460176 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
GARNL3-211ENST00000460176 CHL1O00533 1208 aa13.38□□□□□ -0.27
GARNL3-211ENST00000460176 IFT57Q9NWB7 429 aa13.38□□□□□ -0.27
GARNL3-211ENST00000460176 BABAM1Q9NWV8 329 aa13.38□□□□□ -0.27
GARNL3-211ENST00000460176 ZBED9Q6R2W3 1325 aa13.38□□□□□ -0.27
GARNL3-211ENST00000460176 TAF1LQ8IZX4 1826 aa13.37□□□□□ -0.27
GARNL3-211ENST00000460176 PALLDQ8WX93 1383 aa13.37□□□□□ -0.27
GARNL3-211ENST00000460176 KCNQ3O43525 872 aa13.37□□□□□ -0.27
GARNL3-211ENST00000460176 SLC39A6Q13433 755 aa13.37□□□□□ -0.27
GARNL3-211ENST00000460176 ZNF790Q6PG37 636 aa13.37□□□□□ -0.27
GARNL3-211ENST00000460176 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
GARNL3-211ENST00000460176 MIS18AQ9NYP9 233 aa13.37□□□□□ -0.27
GARNL3-211ENST00000460176 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
GARNL3-211ENST00000460176 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
GARNL3-211ENST00000460176 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-211ENST00000460176 GNAI1P63096 354 aa13.36□□□□□ -0.27
GARNL3-211ENST00000460176 TSPYL4Q9UJ04 414 aa13.36□□□□□ -0.27
GARNL3-211ENST00000460176 APBA3O96018 575 aa13.35□□□□□ -0.27
GARNL3-211ENST00000460176 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
GARNL3-211ENST00000460176 CCDC125Q86Z20 511 aa13.35□□□□□ -0.27
GARNL3-211ENST00000460176 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
GARNL3-211ENST00000460176 SMARCC1Q92922 1105 aaPredicted RBP13.35□□□□□ -0.27
GARNL3-211ENST00000460176 MBIPQ9NS73 344 aa13.35□□□□□ -0.27
GARNL3-211ENST00000460176 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
GARNL3-211ENST00000460176 PLSCR1O15162 318 aa13.34□□□□□ -0.27
GARNL3-211ENST00000460176 TSR2Q969E8 191 aaKnown RBP13.34□□□□□ -0.27
GARNL3-211ENST00000460176 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
GARNL3-211ENST00000460176 YTHDC1Q96MU7 727 aaKnown RBP13.34□□□□□ -0.27
GARNL3-211ENST00000460176 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
GARNL3-211ENST00000460176 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.27
GARNL3-211ENST00000460176 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
GARNL3-211ENST00000460176 SLFN5Q08AF3 891 aa13.33□□□□□ -0.28
GARNL3-211ENST00000460176 SF3B2Q13435 895 aaKnown RBP13.33□□□□□ -0.28
GARNL3-211ENST00000460176 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
GARNL3-211ENST00000460176 ZNF496Q96IT1 587 aaPredicted RBP13.33□□□□□ -0.28
GARNL3-211ENST00000460176 SLC4A9Q96Q91 983 aa13.33□□□□□ -0.28
GARNL3-211ENST00000460176 LOC102724428A0A0B4J2F2 783 aa13.32□□□□□ -0.28
GARNL3-211ENST00000460176 E9PSI1 815 aa13.32□□□□□ -0.28
GARNL3-211ENST00000460176 PTCD1O75127 700 aaKnown RBP13.32□□□□□ -0.28
GARNL3-211ENST00000460176 BAG6P46379 1132 aa13.32□□□□□ -0.28
GARNL3-211ENST00000460176 SIK1P57059 783 aa13.32□□□□□ -0.28
GARNL3-211ENST00000460176 TRMT2AQ8IZ69 625 aaKnown RBP13.32□□□□□ -0.28
GARNL3-211ENST00000460176 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
GARNL3-211ENST00000460176 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
GARNL3-211ENST00000460176 EN1Q05925 392 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms