RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 CACNA2D4Q7Z3S7 1137 aa18.74■□□□□ 0.59
HDAC7-217ENST00000459625 TRMT112Q9UI30 125 aaKnown RBP18.74■□□□□ 0.59
HDAC7-217ENST00000459625 F8W031 263 aaPredicted RBP18.73■□□□□ 0.59
HDAC7-217ENST00000459625 CASTP20810 708 aaKnown RBP18.73■□□□□ 0.59
HDAC7-217ENST00000459625 ZNF397Q8NF99 534 aaPredicted RBP18.73■□□□□ 0.59
HDAC7-217ENST00000459625 KRT85P78386 507 aa18.73■□□□□ 0.59
HDAC7-217ENST00000459625 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
HDAC7-217ENST00000459625 CTNNA3Q9UI47 895 aa18.73■□□□□ 0.59
HDAC7-217ENST00000459625 CBFA2T2O43439 604 aa18.72■□□□□ 0.59
HDAC7-217ENST00000459625 KIF20AO95235 890 aa18.72■□□□□ 0.59
HDAC7-217ENST00000459625 TSG101Q99816 390 aa18.72■□□□□ 0.59
HDAC7-217ENST00000459625 BOLA2Q9H3K6 86 aa18.72■□□□□ 0.59
HDAC7-217ENST00000459625 ZNF287Q9HBT7 754 aa18.72■□□□□ 0.59
HDAC7-217ENST00000459625 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
HDAC7-217ENST00000459625 NAPBQ9H115 298 aa18.72■□□□□ 0.59
HDAC7-217ENST00000459625 MAPK8IP2Q13387 824 aaPredicted RBP18.71■□□□□ 0.59
HDAC7-217ENST00000459625 CFAP100Q494V2 611 aa18.71■□□□□ 0.59
HDAC7-217ENST00000459625 UPF3BQ9BZI7 483 aaKnown RBP18.71■□□□□ 0.59
HDAC7-217ENST00000459625 RBM26Q5T8P6 1007 aaKnown RBP18.71■□□□□ 0.59
HDAC7-217ENST00000459625 BICD1Q96G01 975 aa18.71■□□□□ 0.59
HDAC7-217ENST00000459625 CFAP45Q9UL16 551 aa18.71■□□□□ 0.59
HDAC7-217ENST00000459625 PPFIA3O75145 1194 aa18.7■□□□□ 0.58
HDAC7-217ENST00000459625 SMC1AQ14683 1233 aaKnown RBP18.7■□□□□ 0.58
HDAC7-217ENST00000459625 FERMT3Q86UX7 667 aa18.7■□□□□ 0.58
HDAC7-217ENST00000459625 CKAP2LQ8IYA6 745 aa18.7■□□□□ 0.58
HDAC7-217ENST00000459625 CEP63Q96MT8 703 aa18.7■□□□□ 0.58
HDAC7-217ENST00000459625 BIN2Q9UBW5 565 aaPredicted RBP18.7■□□□□ 0.58
HDAC7-217ENST00000459625 STAMBPO95630 424 aa18.7■□□□□ 0.58
HDAC7-217ENST00000459625 SMARCA5O60264 1052 aaPredicted RBP18.69■□□□□ 0.58
HDAC7-217ENST00000459625 WASF1Q92558 559 aa18.69■□□□□ 0.58
HDAC7-217ENST00000459625 DPH6Q7L8W6 267 aa18.69■□□□□ 0.58
HDAC7-217ENST00000459625 RTEL1-TNFRSF6BF6WH68 1400 aa18.69■□□□□ 0.58
HDAC7-217ENST00000459625 LMAN1P49257 510 aa18.69■□□□□ 0.58
HDAC7-217ENST00000459625 PLS1Q14651 629 aa18.69■□□□□ 0.58
HDAC7-217ENST00000459625 TCERG1LQ5VWI1 586 aa18.69■□□□□ 0.58
HDAC7-217ENST00000459625 CPLX3Q8WVH0 158 aa18.69■□□□□ 0.58
HDAC7-217ENST00000459625 MBD3O95983 291 aa18.69■□□□□ 0.58
HDAC7-217ENST00000459625 MCM10Q7L590 875 aa18.69■□□□□ 0.58
HDAC7-217ENST00000459625 RAB11FIP4Q86YS3 637 aa18.69■□□□□ 0.58
HDAC7-217ENST00000459625 PPP2R1AP30153 589 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 TERF1P54274 439 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 NLRP5P59047 1200 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 SPA17Q15506 151 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 LARP6Q9BRS8 491 aaKnown RBP18.68■□□□□ 0.58
HDAC7-217ENST00000459625 CEP131Q9UPN4 1083 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 ERICH4A6NGS2 130 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 EXOC6BQ9Y2D4 811 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 ARHGAP29Q52LW3 1261 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 HOOK3Q86VS8 718 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 SYCP3Q8IZU3 236 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 ZMYND15Q9H091 742 aa18.68■□□□□ 0.58
HDAC7-217ENST00000459625 MCM2P49736 904 aa18.67■□□□□ 0.58
HDAC7-217ENST00000459625 GCC1Q96CN9 775 aa18.67■□□□□ 0.58
HDAC7-217ENST00000459625 TDRD12Q587J7 1177 aaKnown RBP18.67■□□□□ 0.58
HDAC7-217ENST00000459625 PRPF4BQ13523 1007 aaKnown RBP18.67■□□□□ 0.58
HDAC7-217ENST00000459625 SSX2IPQ9Y2D8 614 aa18.67■□□□□ 0.58
HDAC7-217ENST00000459625 MRE11P49959 708 aa18.67■□□□□ 0.58
HDAC7-217ENST00000459625 GNAT3A8MTJ3 354 aa18.67■□□□□ 0.58
HDAC7-217ENST00000459625 CCDC83Q8IWF9 413 aa18.67■□□□□ 0.58
HDAC7-217ENST00000459625 JARID2Q92833 1246 aaPredicted RBP18.67■□□□□ 0.58
HDAC7-217ENST00000459625 PRC1O43663 620 aa18.66■□□□□ 0.58
HDAC7-217ENST00000459625 RAPGEF3O95398 923 aa18.66■□□□□ 0.58
HDAC7-217ENST00000459625 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
HDAC7-217ENST00000459625 RFC4P35249 363 aa18.66■□□□□ 0.58
HDAC7-217ENST00000459625 FKBP15Q5T1M5 1219 aa18.66■□□□□ 0.58
HDAC7-217ENST00000459625 ACSBG1Q96GR2 724 aa18.66■□□□□ 0.58
HDAC7-217ENST00000459625 CTCFLQ8NI51 663 aaPredicted RBP18.66■□□□□ 0.58
HDAC7-217ENST00000459625 INCENPQ9NQS7 918 aa18.66■□□□□ 0.58
HDAC7-217ENST00000459625 ERLIN1O75477 346 aa18.66■□□□□ 0.58
HDAC7-217ENST00000459625 IQCEQ6IPM2 695 aa18.66■□□□□ 0.58
HDAC7-217ENST00000459625 ZBTB3Q9H5J0 574 aa18.66■□□□□ 0.58
HDAC7-217ENST00000459625 EHMT1Q9H9B1 1298 aa18.66■□□□□ 0.58
HDAC7-217ENST00000459625 SLC5A1P13866 664 aa18.65■□□□□ 0.58
HDAC7-217ENST00000459625 RGS22Q8NE09 1264 aa18.65■□□□□ 0.58
HDAC7-217ENST00000459625 CCDC148Q8NFR7 591 aa18.65■□□□□ 0.58
HDAC7-217ENST00000459625 THUMPD2Q9BTF0 503 aaKnown RBP18.65■□□□□ 0.58
HDAC7-217ENST00000459625 IFIT5Q13325 482 aaKnown RBP18.65■□□□□ 0.58
HDAC7-217ENST00000459625 OTUD6BQ8N6M0 293 aa18.65■□□□□ 0.58
HDAC7-217ENST00000459625 IFFO1Q0D2I5 559 aa18.65■□□□□ 0.58
HDAC7-217ENST00000459625 WDR33Q9C0J8 1336 aaKnown RBP18.65■□□□□ 0.58
HDAC7-217ENST00000459625 NUP62CLQ9H1M0 184 aa18.65■□□□□ 0.58
HDAC7-217ENST00000459625 TMEM266Q2M3C6 531 aa18.65■□□□□ 0.58
HDAC7-217ENST00000459625 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.58
HDAC7-217ENST00000459625 PRPF40BQ6NWY9 871 aaKnown RBP18.64■□□□□ 0.58
HDAC7-217ENST00000459625 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.57
HDAC7-217ENST00000459625 MYO1BO43795 1136 aa18.64■□□□□ 0.57
HDAC7-217ENST00000459625 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.64■□□□□ 0.57
HDAC7-217ENST00000459625 AKAP2Q9Y2D5 859 aa18.64■□□□□ 0.57
HDAC7-217ENST00000459625 CABP5Q9NP86 173 aa18.64■□□□□ 0.57
HDAC7-217ENST00000459625 LUZP1Q86V48 1076 aa18.63■□□□□ 0.57
HDAC7-217ENST00000459625 SLC12A7Q9Y666 1083 aa18.63■□□□□ 0.57
HDAC7-217ENST00000459625 CCT2P78371 535 aaKnown RBP18.63■□□□□ 0.57
HDAC7-217ENST00000459625 NBPF1Q3BBV0 1214 aa18.63■□□□□ 0.57
HDAC7-217ENST00000459625 MAP3K12Q12852 859 aa18.63■□□□□ 0.57
HDAC7-217ENST00000459625 PANK2Q9BZ23 570 aa18.63■□□□□ 0.57
HDAC7-217ENST00000459625 RRBP1Q9P2E9 1410 aaKnown RBP18.63■□□□□ 0.57
HDAC7-217ENST00000459625 TMCO5BA8MYB1 307 aa18.63■□□□□ 0.57
HDAC7-217ENST00000459625 PRKCSHP14314 528 aaPredicted RBP18.63■□□□□ 0.57
HDAC7-217ENST00000459625 DDX23Q9BUQ8 820 aaKnown RBP18.63■□□□□ 0.57
HDAC7-217ENST00000459625 EIF3JO75822 258 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms