RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 RAB15P59190 212 aa7.37□□□□□ -1.23
HMGB4-202ENST00000458277 DOC2BQ14184 412 aa7.37□□□□□ -1.23
HMGB4-202ENST00000458277 DIXDC1Q155Q3 683 aa7.37□□□□□ -1.23
HMGB4-202ENST00000458277 NUTM2DQ5VT03 806 aaPredicted RBP7.37□□□□□ -1.23
HMGB4-202ENST00000458277 GIGYF2Q6Y7W6 1299 aaKnown RBP7.37□□□□□ -1.23
HMGB4-202ENST00000458277 RIC3Q7Z5B4 369 aa7.37□□□□□ -1.23
HMGB4-202ENST00000458277 MTERF4Q7Z6M4 381 aaKnown RBP7.37□□□□□ -1.23
HMGB4-202ENST00000458277 NUTM2AQ8IVF1 878 aaPredicted RBP7.37□□□□□ -1.23
HMGB4-202ENST00000458277 ZNF784Q8NCA9 323 aaPredicted RBP7.37□□□□□ -1.23
HMGB4-202ENST00000458277 GAS2L1Q99501 681 aaPredicted RBP7.37□□□□□ -1.23
HMGB4-202ENST00000458277 CDV3Q9UKY7 258 aaKnown RBP7.37□□□□□ -1.23
HMGB4-202ENST00000458277 RSF1Q96T23 1441 aaPredicted RBP7.36□□□□□ -1.23
HMGB4-202ENST00000458277 H7C1W4 665 aa7.36□□□□□ -1.23
HMGB4-202ENST00000458277 L1TD1Q5T7N2 865 aaKnown RBP7.36□□□□□ -1.23
HMGB4-202ENST00000458277 CD163Q86VB7 1156 aa7.36□□□□□ -1.23
HMGB4-202ENST00000458277 KDF1Q8NAX2 398 aaPredicted RBP7.36□□□□□ -1.23
HMGB4-202ENST00000458277 GPKOWQ92917 476 aaPredicted RBP eCLIP7.36□□□□□ -1.23
HMGB4-202ENST00000458277 DDRGK1Q96HY6 314 aa7.36□□□□□ -1.23
HMGB4-202ENST00000458277 NAP1L2Q9ULW6 460 aaPredicted RBP7.36□□□□□ -1.23
HMGB4-202ENST00000458277 BAZ1AQ9NRL2 1556 aaPredicted RBP7.36□□□□□ -1.23
HMGB4-202ENST00000458277 MROH2BQ7Z745 1585 aa7.35□□□□□ -1.23
HMGB4-202ENST00000458277 TULP1O00294 542 aaPredicted RBP7.35□□□□□ -1.23
HMGB4-202ENST00000458277 HMGB1P09429 215 aaKnown RBP7.35□□□□□ -1.23
HMGB4-202ENST00000458277 ADD1P35611 737 aaKnown RBP7.35□□□□□ -1.23
HMGB4-202ENST00000458277 TAF3Q5VWG9 929 aa7.35□□□□□ -1.23
HMGB4-202ENST00000458277 C1orf229Q6ZS94 237 aaPredicted RBP7.35□□□□□ -1.23
HMGB4-202ENST00000458277 ZBTB33Q86T24 672 aa7.35□□□□□ -1.23
HMGB4-202ENST00000458277 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
HMGB4-202ENST00000458277 PTMSP20962 102 aa7.34□□□□□ -1.23
HMGB4-202ENST00000458277 CHRNA4P43681 627 aa7.34□□□□□ -1.23
HMGB4-202ENST00000458277 PNNQ9H307 717 aaKnown RBP7.34□□□□□ -1.23
HMGB4-202ENST00000458277 CDK11BP21127 795 aaKnown RBP7.33□□□□□ -1.24
HMGB4-202ENST00000458277 RNF144AP50876 292 aaPredicted RBP7.33□□□□□ -1.24
HMGB4-202ENST00000458277 QPCTQ16769 361 aa7.33□□□□□ -1.24
HMGB4-202ENST00000458277 TEX2Q8IWB9 1127 aa7.33□□□□□ -1.24
HMGB4-202ENST00000458277 FTSJ3Q8IY81 847 aaKnown RBP7.33□□□□□ -1.24
HMGB4-202ENST00000458277 SMARCA4P51532 1647 aa7.33□□□□□ -1.24
HMGB4-202ENST00000458277 LILRA1O75019 489 aa7.32□□□□□ -1.24
HMGB4-202ENST00000458277 AMPD1P23109 780 aa7.32□□□□□ -1.24
HMGB4-202ENST00000458277 MAP2K3P46734 347 aa7.32□□□□□ -1.24
HMGB4-202ENST00000458277 PDXDC2PQ6P474 469 aa7.32□□□□□ -1.24
HMGB4-202ENST00000458277 SMAP1Q8IYB5 467 aaPredicted RBP7.32□□□□□ -1.24
HMGB4-202ENST00000458277 HELBQ8NG08 1087 aaPredicted RBP7.32□□□□□ -1.24
HMGB4-202ENST00000458277 EDARADDQ8WWZ3 215 aa7.32□□□□□ -1.24
HMGB4-202ENST00000458277 DYRK1BQ9Y463 629 aa7.32□□□□□ -1.24
HMGB4-202ENST00000458277 TRIM44Q96DX7 344 aaPredicted RBP7.31□□□□□ -1.24
HMGB4-202ENST00000458277 ITGAEP38570 1179 aa7.3□□□□□ -1.24
HMGB4-202ENST00000458277 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
HMGB4-202ENST00000458277 KLRG1Q96E93 195 aa7.3□□□□□ -1.24
HMGB4-202ENST00000458277 CHMP4AQ9BY43 222 aa7.3□□□□□ -1.24
HMGB4-202ENST00000458277 PEG3Q9GZU2 1588 aa7.29□□□□□ -1.24
HMGB4-202ENST00000458277 ERVH48-1M5A8F1 160 aa7.29□□□□□ -1.24
HMGB4-202ENST00000458277 POU4F2Q12837 409 aa7.29□□□□□ -1.24
HMGB4-202ENST00000458277 UTP14CQ5TAP6 766 aaKnown RBP7.29□□□□□ -1.24
HMGB4-202ENST00000458277 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
HMGB4-202ENST00000458277 NUCKS1Q9H1E3 243 aaKnown RBP7.29□□□□□ -1.24
HMGB4-202ENST00000458277 LIMD1Q9UGP4 676 aa7.29□□□□□ -1.24
HMGB4-202ENST00000458277 PRDM4Q9UKN5 801 aa7.29□□□□□ -1.24
HMGB4-202ENST00000458277 BRPF3Q9ULD4 1205 aa7.29□□□□□ -1.24
HMGB4-202ENST00000458277 LAS1LQ9Y4W2 734 aaKnown RBP7.29□□□□□ -1.24
HMGB4-202ENST00000458277 MEN1O00255 615 aa7.28□□□□□ -1.24
HMGB4-202ENST00000458277 TERF1P54274 439 aa7.28□□□□□ -1.24
HMGB4-202ENST00000458277 FOXD4L6Q3SYB3 417 aaPredicted RBP7.28□□□□□ -1.24
HMGB4-202ENST00000458277 FOXD4L3Q6VB84 417 aaPredicted RBP7.28□□□□□ -1.24
HMGB4-202ENST00000458277 NCAPD3P42695 1498 aa7.28□□□□□ -1.24
HMGB4-202ENST00000458277 ATAD2BQ9ULI0 1458 aa7.28□□□□□ -1.24
HMGB4-202ENST00000458277 GOLGA6L3A6NEY3 463 aa7.27□□□□□ -1.25
HMGB4-202ENST00000458277 GNB5O14775 395 aa7.27□□□□□ -1.25
HMGB4-202ENST00000458277 HOXB4P17483 251 aaPredicted RBP7.27□□□□□ -1.25
HMGB4-202ENST00000458277 AMHR2Q16671 573 aa7.27□□□□□ -1.25
HMGB4-202ENST00000458277 NBPF20Q3BBV1 942 aa7.27□□□□□ -1.25
HMGB4-202ENST00000458277 NBPF11Q86T75 865 aa7.27□□□□□ -1.25
HMGB4-202ENST00000458277 C14orf37Q86TY3 774 aa7.27□□□□□ -1.25
HMGB4-202ENST00000458277 ZFP64Q9NPA5 681 aa7.27□□□□□ -1.25
HMGB4-202ENST00000458277 CYLDQ9NQC7 956 aa7.27□□□□□ -1.25
HMGB4-202ENST00000458277 FKBPLQ9UIM3 349 aa7.27□□□□□ -1.25
HMGB4-202ENST00000458277 GDF2Q9UK05 429 aaPredicted RBP7.27□□□□□ -1.25
HMGB4-202ENST00000458277 PIK3R2O00459 728 aa7.26□□□□□ -1.25
HMGB4-202ENST00000458277 LILRB3O75022 631 aa7.26□□□□□ -1.25
HMGB4-202ENST00000458277 SMARCA2P51531 1590 aa7.25□□□□□ -1.25
HMGB4-202ENST00000458277 KIF20AO95235 890 aa7.25□□□□□ -1.25
HMGB4-202ENST00000458277 PTMAP06454 111 aaKnown RBP7.25□□□□□ -1.25
HMGB4-202ENST00000458277 SLC27A3Q5K4L6 730 aa7.25□□□□□ -1.25
HMGB4-202ENST00000458277 AXDND1Q5T1B0 1012 aaPredicted RBP7.25□□□□□ -1.25
HMGB4-202ENST00000458277 ARTNQ5T4W7 220 aa7.25□□□□□ -1.25
HMGB4-202ENST00000458277 ADAM32Q8TC27 787 aa7.25□□□□□ -1.25
HMGB4-202ENST00000458277 KDM2AQ9Y2K7 1162 aa7.25□□□□□ -1.25
HMGB4-202ENST00000458277 HMGXB3Q12766 1538 aa7.24□□□□□ -1.25
HMGB4-202ENST00000458277 CLGNO14967 610 aa7.24□□□□□ -1.25
HMGB4-202ENST00000458277 ANP32CO43423 234 aa7.24□□□□□ -1.25
HMGB4-202ENST00000458277 GOLGA6L1Q8N7Z2 621 aa7.24□□□□□ -1.25
HMGB4-202ENST00000458277 OCSTAMPQ9BR26 566 aa7.24□□□□□ -1.25
HMGB4-202ENST00000458277 CFHR5Q9BXR6 569 aa7.24□□□□□ -1.25
HMGB4-202ENST00000458277 GOLGA2P5Q9HBQ8 144 aa7.24□□□□□ -1.25
HMGB4-202ENST00000458277 ATP5J2-PTCD1G3V325 749 aa7.23□□□□□ -1.25
HMGB4-202ENST00000458277 GPC1P35052 558 aa7.23□□□□□ -1.25
HMGB4-202ENST00000458277 GATA4P43694 442 aa7.23□□□□□ -1.25
HMGB4-202ENST00000458277 PTK2Q05397 1052 aa7.23□□□□□ -1.25
HMGB4-202ENST00000458277 NBPF10Q6P3W6 841 aaKnown RBP7.23□□□□□ -1.25
HMGB4-202ENST00000458277 NBPF15Q8N660 670 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms