RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 ATG3Q9NT62 314 aa23.99■■□□□ 1.43
TRIM13-206ENST00000457662 ASAP1Q9ULH1 1129 aa23.99■■□□□ 1.43
TRIM13-206ENST00000457662 CEMIPQ8WUJ3 1361 aa23.98■■□□□ 1.43
TRIM13-206ENST00000457662 PALLDQ8WX93 1383 aa23.97■■□□□ 1.43
TRIM13-206ENST00000457662 MCM10Q7L590 875 aa23.97■■□□□ 1.43
TRIM13-206ENST00000457662 LMOD3Q0VAK6 560 aa23.96■■□□□ 1.43
TRIM13-206ENST00000457662 MRC1P22897 1456 aa23.96■■□□□ 1.43
TRIM13-206ENST00000457662 HMGB2P26583 209 aaKnown RBP23.95■■□□□ 1.42
TRIM13-206ENST00000457662 DCTN1Q14203 1278 aa23.95■■□□□ 1.42
TRIM13-206ENST00000457662 FAM9BQ8IZU0 186 aa23.95■■□□□ 1.42
TRIM13-206ENST00000457662 MIER1Q8N108 512 aa23.95■■□□□ 1.42
TRIM13-206ENST00000457662 VIRMAQ69YN4 1812 aaKnown RBP23.95■■□□□ 1.42
TRIM13-206ENST00000457662 APAF1O14727 1248 aa23.94■■□□□ 1.42
TRIM13-206ENST00000457662 NEUROD2Q15784 382 aa23.94■■□□□ 1.42
TRIM13-206ENST00000457662 RRP7AQ9Y3A4 280 aaKnown RBP23.94■■□□□ 1.42
TRIM13-206ENST00000457662 DLG5Q8TDM6 1919 aa23.94■■□□□ 1.42
TRIM13-206ENST00000457662 NBPF14Q5TI25 921 aa23.94■■□□□ 1.42
TRIM13-206ENST00000457662 CCNL1Q9UK58 526 aaPredicted RBP23.94■■□□□ 1.42
TRIM13-206ENST00000457662 LRRC4BQ9NT99 713 aa23.93■■□□□ 1.42
TRIM13-206ENST00000457662 LOC102724428A0A0B4J2F2 783 aa23.92■■□□□ 1.42
TRIM13-206ENST00000457662 SIK1P57059 783 aa23.92■■□□□ 1.42
TRIM13-206ENST00000457662 RREB1Q92766 1687 aa23.92■■□□□ 1.42
TRIM13-206ENST00000457662 LY75O60449 1722 aa23.91■■□□□ 1.42
TRIM13-206ENST00000457662 TAF7Q15545 349 aaPredicted RBP23.91■■□□□ 1.42
TRIM13-206ENST00000457662 RBM42Q9BTD8 480 aaKnown RBP23.9■■□□□ 1.42
TRIM13-206ENST00000457662 BTBD11A6QL63 1104 aa23.89■■□□□ 1.42
TRIM13-206ENST00000457662 SLC39A6Q13433 755 aa23.89■■□□□ 1.42
TRIM13-206ENST00000457662 PTCD1O75127 700 aaKnown RBP23.88■■□□□ 1.41
TRIM13-206ENST00000457662 KCNQ4P56696 695 aa23.88■■□□□ 1.41
TRIM13-206ENST00000457662 TTC5Q8N0Z6 440 aa23.88■■□□□ 1.41
TRIM13-206ENST00000457662 TRIM35Q9UPQ4 493 aa23.88■■□□□ 1.41
TRIM13-206ENST00000457662 ATP6V1AP38606 617 aa23.87■■□□□ 1.41
TRIM13-206ENST00000457662 ZNF790Q6PG37 636 aa23.87■■□□□ 1.41
TRIM13-206ENST00000457662 THUMPD2Q9BTF0 503 aaKnown RBP23.87■■□□□ 1.41
TRIM13-206ENST00000457662 NUP188Q5SRE5 1749 aa23.87■■□□□ 1.41
TRIM13-206ENST00000457662 NCBP3Q53F19 620 aaKnown RBP23.86■■□□□ 1.41
TRIM13-206ENST00000457662 STK32BQ9NY57 414 aa23.86■■□□□ 1.41
TRIM13-206ENST00000457662 SIPA1L3O60292 1781 aaPredicted RBP23.86■■□□□ 1.41
TRIM13-206ENST00000457662 SLC4A9Q96Q91 983 aa23.84■■□□□ 1.41
TRIM13-206ENST00000457662 SLC15A2Q16348 729 aa23.83■■□□□ 1.41
TRIM13-206ENST00000457662 ITPK1Q13572 414 aa23.82■■□□□ 1.4
TRIM13-206ENST00000457662 VSIG10Q8N0Z9 540 aa23.82■■□□□ 1.4
TRIM13-206ENST00000457662 ANO8Q9HCE9 1232 aaPredicted RBP23.82■■□□□ 1.4
TRIM13-206ENST00000457662 BABAM1Q9NWV8 329 aa23.82■■□□□ 1.4
TRIM13-206ENST00000457662 CCDC27Q2M243 656 aa23.81■■□□□ 1.4
TRIM13-206ENST00000457662 AKT1S1Q96B36 256 aa23.81■■□□□ 1.4
TRIM13-206ENST00000457662 FMNL2Q96PY5 1086 aa23.81■■□□□ 1.4
TRIM13-206ENST00000457662 KCNQ3O43525 872 aa23.81■■□□□ 1.4
TRIM13-206ENST00000457662 CALD1Q05682 793 aaKnown RBP23.81■■□□□ 1.4
TRIM13-206ENST00000457662 PAPPAQ13219 1627 aa23.81■■□□□ 1.4
TRIM13-206ENST00000457662 R3HDM1Q15032 1099 aaKnown RBP23.81■■□□□ 1.4
TRIM13-206ENST00000457662 NGEFQ8N5V2 710 aa23.81■■□□□ 1.4
TRIM13-206ENST00000457662 ZNF496Q96IT1 587 aaPredicted RBP23.81■■□□□ 1.4
TRIM13-206ENST00000457662 MIS18AQ9NYP9 233 aa23.81■■□□□ 1.4
TRIM13-206ENST00000457662 ZNF831Q5JPB2 1677 aa23.8■■□□□ 1.4
TRIM13-206ENST00000457662 LINC00116Q8NCU8 138 aa23.79■■□□□ 1.4
TRIM13-206ENST00000457662 KCPQ6ZWJ8 1503 aa23.78■■□□□ 1.4
TRIM13-206ENST00000457662 ZNF827Q17R98 1081 aa23.78■■□□□ 1.4
TRIM13-206ENST00000457662 TEX13AQ9BXU3 409 aaPredicted RBP23.78■■□□□ 1.4
TRIM13-206ENST00000457662 HEG1Q9ULI3 1381 aa23.77■■□□□ 1.4
TRIM13-206ENST00000457662 PSDA5PKW4 1024 aaPredicted RBP23.77■■□□□ 1.4
TRIM13-206ENST00000457662 TFCP2L1Q9NZI6 479 aa23.77■■□□□ 1.4
TRIM13-206ENST00000457662 TSPYL4Q9UJ04 414 aa23.77■■□□□ 1.4
TRIM13-206ENST00000457662 TAF1LQ8IZX4 1826 aa23.77■■□□□ 1.4
TRIM13-206ENST00000457662 SENP3-EIF4A1A0A087X0R7 540 aa23.76■■□□□ 1.39
TRIM13-206ENST00000457662 CHL1O00533 1208 aa23.76■■□□□ 1.39
TRIM13-206ENST00000457662 RC3H1Q5TC82 1133 aaKnown RBP23.76■■□□□ 1.39
TRIM13-206ENST00000457662 WWC1Q8IX03 1113 aa23.76■■□□□ 1.39
TRIM13-206ENST00000457662 DNAJC10Q8IXB1 793 aa23.76■■□□□ 1.39
TRIM13-206ENST00000457662 AK7Q96M32 723 aa23.76■■□□□ 1.39
TRIM13-206ENST00000457662 C5P01031 1676 aa23.76■■□□□ 1.39
TRIM13-206ENST00000457662 UBR2Q8IWV8 1755 aa23.76■■□□□ 1.39
TRIM13-206ENST00000457662 CFAP44Q96MT7 982 aa23.75■■□□□ 1.39
TRIM13-206ENST00000457662 LAS1LQ9Y4W2 734 aaKnown RBP23.75■■□□□ 1.39
TRIM13-206ENST00000457662 STARD3NLO95772 234 aa23.74■■□□□ 1.39
TRIM13-206ENST00000457662 SNRPA1P09661 255 aaKnown RBP23.74■■□□□ 1.39
TRIM13-206ENST00000457662 EIF4A1P60842 406 aaKnown RBP23.74■■□□□ 1.39
TRIM13-206ENST00000457662 SALL2Q9Y467 1007 aaPredicted RBP23.74■■□□□ 1.39
TRIM13-206ENST00000457662 CNTNAP4Q9C0A0 1308 aa23.73■■□□□ 1.39
TRIM13-206ENST00000457662 C4BP0C0L5 1744 aa23.73■■□□□ 1.39
TRIM13-206ENST00000457662 CYP19A1P11511 503 aaPredicted RBP23.73■■□□□ 1.39
TRIM13-206ENST00000457662 GNAI1P63096 354 aa23.73■■□□□ 1.39
TRIM13-206ENST00000457662 CRKLP46109 303 aaKnown RBP23.72■■□□□ 1.39
TRIM13-206ENST00000457662 FLAD1Q8NFF5 587 aa23.72■■□□□ 1.39
TRIM13-206ENST00000457662 IFT57Q9NWB7 429 aa23.72■■□□□ 1.39
TRIM13-206ENST00000457662 CICQ96RK0 1608 aaPredicted RBP23.71■■□□□ 1.39
TRIM13-206ENST00000457662 ZNF853P0CG23 659 aa23.71■■□□□ 1.39
TRIM13-206ENST00000457662 WDR63Q8IWG1 891 aa23.71■■□□□ 1.39
TRIM13-206ENST00000457662 GNPATO15228 680 aa23.7■■□□□ 1.38
TRIM13-206ENST00000457662 KDM3BQ7LBC6 1761 aa23.7■■□□□ 1.38
TRIM13-206ENST00000457662 RPS6KA4O75676 772 aa23.69■■□□□ 1.38
TRIM13-206ENST00000457662 CCDC87Q9NVE4 849 aa23.69■■□□□ 1.38
TRIM13-206ENST00000457662 RTCBQ9Y3I0 505 aaKnown RBP23.69■■□□□ 1.38
TRIM13-206ENST00000457662 TJP1Q07157 1748 aa23.69■■□□□ 1.38
TRIM13-206ENST00000457662 IL16Q14005 1332 aa23.69■■□□□ 1.38
TRIM13-206ENST00000457662 PNPLA7Q6ZV29 1317 aa23.69■■□□□ 1.38
TRIM13-206ENST00000457662 GIGYF1O75420 1035 aaPredicted RBP23.68■■□□□ 1.38
TRIM13-206ENST00000457662 SSFA2P28290 1259 aa23.68■■□□□ 1.38
TRIM13-206ENST00000457662 INTS5Q6P9B9 1019 aaKnown RBP23.68■■□□□ 1.38
TRIM13-206ENST00000457662 USP16Q9Y5T5 823 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms