RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 SLC52A2Q9HAB3 445 aa24.66■■□□□ 1.54
SBDSP1-205ENST00000456312 COL5A3P25940 1745 aaPredicted RBP24.65■■□□□ 1.54
SBDSP1-205ENST00000456312 C5P01031 1676 aa24.65■■□□□ 1.54
SBDSP1-205ENST00000456312 TJP1Q07157 1748 aa24.64■■□□□ 1.54
SBDSP1-205ENST00000456312 BAG6P46379 1132 aa24.64■■□□□ 1.54
SBDSP1-205ENST00000456312 TMOD3Q9NYL9 352 aa24.64■■□□□ 1.54
SBDSP1-205ENST00000456312 KCPQ6ZWJ8 1503 aa24.64■■□□□ 1.53
SBDSP1-205ENST00000456312 APAF1O14727 1248 aa24.63■■□□□ 1.53
SBDSP1-205ENST00000456312 EN1Q05925 392 aaPredicted RBP24.63■■□□□ 1.53
SBDSP1-205ENST00000456312 SF3B2Q13435 895 aaKnown RBP24.63■■□□□ 1.53
SBDSP1-205ENST00000456312 DCTN1Q14203 1278 aa24.63■■□□□ 1.53
SBDSP1-205ENST00000456312 MCM10Q7L590 875 aa24.63■■□□□ 1.53
SBDSP1-205ENST00000456312 PROM2Q8N271 834 aa24.63■■□□□ 1.53
SBDSP1-205ENST00000456312 NFATC2IPQ8NCF5 419 aa24.63■■□□□ 1.53
SBDSP1-205ENST00000456312 TRIM35Q9UPQ4 493 aa24.63■■□□□ 1.53
SBDSP1-205ENST00000456312 RIPK4P57078 832 aa24.62■■□□□ 1.53
SBDSP1-205ENST00000456312 CABP4P57796 275 aa24.62■■□□□ 1.53
SBDSP1-205ENST00000456312 FAM9BQ8IZU0 186 aa24.62■■□□□ 1.53
SBDSP1-205ENST00000456312 RRP7AQ9Y3A4 280 aaKnown RBP24.62■■□□□ 1.53
SBDSP1-205ENST00000456312 TUBGCP6Q96RT7 1819 aa24.61■■□□□ 1.53
SBDSP1-205ENST00000456312 EZH2Q15910 746 aaKnown RBP24.61■■□□□ 1.53
SBDSP1-205ENST00000456312 ATG3Q9NT62 314 aa24.61■■□□□ 1.53
SBDSP1-205ENST00000456312 PALLDQ8WX93 1383 aa24.6■■□□□ 1.53
SBDSP1-205ENST00000456312 ASAP1Q9ULH1 1129 aa24.6■■□□□ 1.53
SBDSP1-205ENST00000456312 NCBP3Q53F19 620 aaKnown RBP24.59■■□□□ 1.53
SBDSP1-205ENST00000456312 QSER1Q2KHR3 1735 aa24.58■■□□□ 1.53
SBDSP1-205ENST00000456312 RTF1Q92541 710 aaKnown RBP24.58■■□□□ 1.53
SBDSP1-205ENST00000456312 THUMPD2Q9BTF0 503 aaKnown RBP24.58■■□□□ 1.53
SBDSP1-205ENST00000456312 MYH14Q7Z406 1995 aaKnown RBP24.57■■□□□ 1.52
SBDSP1-205ENST00000456312 TXNRD1Q16881 649 aa24.56■■□□□ 1.52
SBDSP1-205ENST00000456312 LMOD3Q0VAK6 560 aa24.55■■□□□ 1.52
SBDSP1-205ENST00000456312 TEFQ10587 303 aa24.55■■□□□ 1.52
SBDSP1-205ENST00000456312 SMARCC1Q92922 1105 aaPredicted RBP24.55■■□□□ 1.52
SBDSP1-205ENST00000456312 LRRC4BQ9NT99 713 aa24.55■■□□□ 1.52
SBDSP1-205ENST00000456312 NEUROD2Q15784 382 aa24.54■■□□□ 1.52
SBDSP1-205ENST00000456312 CCDC27Q2M243 656 aa24.54■■□□□ 1.52
SBDSP1-205ENST00000456312 SLC4A9Q96Q91 983 aa24.54■■□□□ 1.52
SBDSP1-205ENST00000456312 C4BP0C0L5 1744 aa24.54■■□□□ 1.52
SBDSP1-205ENST00000456312 UBR3Q6ZT12 1888 aa24.53■■□□□ 1.52
SBDSP1-205ENST00000456312 LAMB4A4D0S4 1761 aa24.53■■□□□ 1.52
SBDSP1-205ENST00000456312 SLC39A6Q13433 755 aa24.52■■□□□ 1.52
SBDSP1-205ENST00000456312 SLC27A3Q5K4L6 730 aa24.52■■□□□ 1.52
SBDSP1-205ENST00000456312 LOC102724428A0A0B4J2F2 783 aa24.5■■□□□ 1.51
SBDSP1-205ENST00000456312 SIK1P57059 783 aa24.5■■□□□ 1.51
SBDSP1-205ENST00000456312 TAF7Q15545 349 aaPredicted RBP24.5■■□□□ 1.51
SBDSP1-205ENST00000456312 ZNF790Q6PG37 636 aa24.5■■□□□ 1.51
SBDSP1-205ENST00000456312 KCNQ3O43525 872 aa24.49■■□□□ 1.51
SBDSP1-205ENST00000456312 BTBD11A6QL63 1104 aa24.48■■□□□ 1.51
SBDSP1-205ENST00000456312 KCNQ4P56696 695 aa24.48■■□□□ 1.51
SBDSP1-205ENST00000456312 HEG1Q9ULI3 1381 aa24.47■■□□□ 1.51
SBDSP1-205ENST00000456312 ZNF521Q96K83 1311 aa24.47■■□□□ 1.51
SBDSP1-205ENST00000456312 SENP3-EIF4A1A0A087X0R7 540 aa24.47■■□□□ 1.51
SBDSP1-205ENST00000456312 ITPK1Q13572 414 aa24.47■■□□□ 1.51
SBDSP1-205ENST00000456312 WWC1Q8IX03 1113 aa24.47■■□□□ 1.51
SBDSP1-205ENST00000456312 CCNL1Q9UK58 526 aaPredicted RBP24.47■■□□□ 1.51
SBDSP1-205ENST00000456312 ZNF853P0CG23 659 aa24.46■■□□□ 1.51
SBDSP1-205ENST00000456312 ANO8Q9HCE9 1232 aaPredicted RBP24.46■■□□□ 1.51
SBDSP1-205ENST00000456312 BABAM1Q9NWV8 329 aa24.46■■□□□ 1.51
SBDSP1-205ENST00000456312 CASZ1Q86V15 1759 aa24.46■■□□□ 1.51
SBDSP1-205ENST00000456312 NGEFQ8N5V2 710 aa24.45■■□□□ 1.5
SBDSP1-205ENST00000456312 ZNF496Q96IT1 587 aaPredicted RBP24.45■■□□□ 1.5
SBDSP1-205ENST00000456312 CHL1O00533 1208 aa24.44■■□□□ 1.5
SBDSP1-205ENST00000456312 MIS18AQ9NYP9 233 aa24.44■■□□□ 1.5
SBDSP1-205ENST00000456312 PTCD1O75127 700 aaKnown RBP24.43■■□□□ 1.5
SBDSP1-205ENST00000456312 VSIG10Q8N0Z9 540 aa24.43■■□□□ 1.5
SBDSP1-205ENST00000456312 LINC00116Q8NCU8 138 aa24.42■■□□□ 1.5
SBDSP1-205ENST00000456312 AKT1S1Q96B36 256 aa24.42■■□□□ 1.5
SBDSP1-205ENST00000456312 C4AP0C0L4 1744 aa24.41■■□□□ 1.5
SBDSP1-205ENST00000456312 ATP6V1AP38606 617 aa24.41■■□□□ 1.5
SBDSP1-205ENST00000456312 ZNF827Q17R98 1081 aa24.41■■□□□ 1.5
SBDSP1-205ENST00000456312 TTC5Q8N0Z6 440 aa24.41■■□□□ 1.5
SBDSP1-205ENST00000456312 CFAP44Q96MT7 982 aa24.41■■□□□ 1.5
SBDSP1-205ENST00000456312 RBM42Q9BTD8 480 aaKnown RBP24.41■■□□□ 1.5
SBDSP1-205ENST00000456312 IL16Q14005 1332 aa24.4■■□□□ 1.5
SBDSP1-205ENST00000456312 IFT57Q9NWB7 429 aa24.4■■□□□ 1.5
SBDSP1-205ENST00000456312 COL24A1Q17RW2 1714 aa24.39■■□□□ 1.5
SBDSP1-205ENST00000456312 EIF4A1P60842 406 aaKnown RBP24.39■■□□□ 1.49
SBDSP1-205ENST00000456312 FMNL2Q96PY5 1086 aa24.39■■□□□ 1.49
SBDSP1-205ENST00000456312 WDR63Q8IWG1 891 aa24.38■■□□□ 1.49
SBDSP1-205ENST00000456312 TSPYL4Q9UJ04 414 aa24.38■■□□□ 1.49
SBDSP1-205ENST00000456312 CNTNAP4Q9C0A0 1308 aa24.37■■□□□ 1.49
SBDSP1-205ENST00000456312 CALD1Q05682 793 aaKnown RBP24.37■■□□□ 1.49
SBDSP1-205ENST00000456312 DNAJC10Q8IXB1 793 aa24.37■■□□□ 1.49
SBDSP1-205ENST00000456312 SALL2Q9Y467 1007 aaPredicted RBP24.37■■□□□ 1.49
SBDSP1-205ENST00000456312 SLC15A2Q16348 729 aa24.36■■□□□ 1.49
SBDSP1-205ENST00000456312 MBIPQ9NS73 344 aa24.36■■□□□ 1.49
SBDSP1-205ENST00000456312 PRAMEF22A3QJZ6 481 aa24.35■■□□□ 1.49
SBDSP1-205ENST00000456312 CYP19A1P11511 503 aaPredicted RBP24.35■■□□□ 1.49
SBDSP1-205ENST00000456312 SPINK5Q9NQ38 1064 aaPredicted RBP24.35■■□□□ 1.49
SBDSP1-205ENST00000456312 GNAI1P63096 354 aa24.34■■□□□ 1.49
SBDSP1-205ENST00000456312 RC3H1Q5TC82 1133 aaKnown RBP24.34■■□□□ 1.49
SBDSP1-205ENST00000456312 AMIGO3Q86WK7 504 aa24.34■■□□□ 1.49
SBDSP1-205ENST00000456312 GIGYF1O75420 1035 aaPredicted RBP24.33■■□□□ 1.49
SBDSP1-205ENST00000456312 HMGB2P26583 209 aaKnown RBP24.32■■□□□ 1.48
SBDSP1-205ENST00000456312 INTS5Q6P9B9 1019 aaKnown RBP24.32■■□□□ 1.48
SBDSP1-205ENST00000456312 SNRPA1P09661 255 aaKnown RBP24.31■■□□□ 1.48
SBDSP1-205ENST00000456312 CRKLP46109 303 aaKnown RBP24.31■■□□□ 1.48
SBDSP1-205ENST00000456312 NBPF14Q5TI25 921 aa24.31■■□□□ 1.48
SBDSP1-205ENST00000456312 STK32BQ9NY57 414 aa24.31■■□□□ 1.48
SBDSP1-205ENST00000456312 USP16Q9Y5T5 823 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 1261.9 ms