RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 DHX37Q8IY37 1157 aaKnown RBP9.44□□□□□ -0.9
HDAC9-218ENST00000456174 MST1RQ04912 1400 aa9.44□□□□□ -0.9
HDAC9-218ENST00000456174 CDK11BP21127 795 aaKnown RBP9.44□□□□□ -0.9
HDAC9-218ENST00000456174 KRT28Q7Z3Y7 464 aa9.43□□□□□ -0.9
HDAC9-218ENST00000456174 EYA1Q99502 592 aa9.43□□□□□ -0.9
HDAC9-218ENST00000456174 THUMPD2Q9BTF0 503 aaKnown RBP9.43□□□□□ -0.9
HDAC9-218ENST00000456174 RTL1A6NKG5 1358 aa9.43□□□□□ -0.9
HDAC9-218ENST00000456174 LMOD2Q6P5Q4 547 aa9.43□□□□□ -0.9
HDAC9-218ENST00000456174 KCNH5Q8NCM2 988 aa9.43□□□□□ -0.9
HDAC9-218ENST00000456174 CHMP5Q9NZZ3 219 aa9.43□□□□□ -0.9
HDAC9-218ENST00000456174 BCCIPQ9P287 314 aaKnown RBP eCLIP9.43□□□□□ -0.9
HDAC9-218ENST00000456174 IGSF1Q8N6C5 1336 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 PHRF1Q9P1Y6 1649 aaKnown RBP9.42□□□□□ -0.9
HDAC9-218ENST00000456174 KDRP35968 1356 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 ALS2Q96Q42 1657 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 GNAI1P63096 354 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 PDE3AQ14432 1141 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 DNTTIP2Q5QJE6 756 aaKnown RBP9.42□□□□□ -0.9
HDAC9-218ENST00000456174 CADPS2Q86UW7 1296 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 GAS2L3Q86XJ1 694 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 BCL2L13Q9BXK5 485 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 NOL7Q9UMY1 257 aaKnown RBP9.42□□□□□ -0.9
HDAC9-218ENST00000456174 MSH6P52701 1360 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 FAM83GA6ND36 823 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 MMP14P50281 582 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 IFT57Q9NWB7 429 aa9.42□□□□□ -0.9
HDAC9-218ENST00000456174 SLIT3O75094 1523 aa9.41□□□□□ -0.9
HDAC9-218ENST00000456174 IP6K1Q92551 441 aa9.41□□□□□ -0.9
HDAC9-218ENST00000456174 LTV1Q96GA3 475 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-218ENST00000456174 RGPD2P0DJD1 1756 aa9.41□□□□□ -0.9
HDAC9-218ENST00000456174 ZBTB7CA1YPR0 619 aa9.4□□□□□ -0.9
HDAC9-218ENST00000456174 GCP02774 474 aa9.4□□□□□ -0.9
HDAC9-218ENST00000456174 ZNF853P0CG23 659 aa9.4□□□□□ -0.9
HDAC9-218ENST00000456174 MCM5P33992 734 aa9.4□□□□□ -0.9
HDAC9-218ENST00000456174 DCTN1Q14203 1278 aa9.4□□□□□ -0.9
HDAC9-218ENST00000456174 PANK1Q8TE04 598 aa9.4□□□□□ -0.9
HDAC9-218ENST00000456174 TBC1D2Q9BYX2 928 aa9.4□□□□□ -0.9
HDAC9-218ENST00000456174 IFNLR1Q8IU57 520 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-218ENST00000456174 CFAP44Q96MT7 982 aa9.4□□□□□ -0.9
HDAC9-218ENST00000456174 DNAJC2Q99543 621 aaKnown RBP9.4□□□□□ -0.9
HDAC9-218ENST00000456174 SMC4Q9NTJ3 1288 aa9.4□□□□□ -0.9
HDAC9-218ENST00000456174 IBTKQ9P2D0 1353 aaPredicted RBP9.4□□□□□ -0.91
HDAC9-218ENST00000456174 PTMSP20962 102 aa9.39□□□□□ -0.91
HDAC9-218ENST00000456174 IRX5P78411 483 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-218ENST00000456174 MTHFSDQ2M296 383 aaKnown RBP9.39□□□□□ -0.91
HDAC9-218ENST00000456174 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
HDAC9-218ENST00000456174 MBIPQ9NS73 344 aa9.39□□□□□ -0.91
HDAC9-218ENST00000456174 DDX17Q92841 729 aaKnown RBP9.39□□□□□ -0.91
HDAC9-218ENST00000456174 ARID3AQ99856 593 aa9.39□□□□□ -0.91
HDAC9-218ENST00000456174 ZNF335Q9H4Z2 1342 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-218ENST00000456174 RGPD5Q99666 1765 aa9.39□□□□□ -0.91
HDAC9-218ENST00000456174 SKOR2Q2VWA4 1001 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-218ENST00000456174 SAMD1Q6SPF0 538 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-218ENST00000456174 MCM10Q7L590 875 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 ARHGEF25Q86VW2 580 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.38□□□□□ -0.91
HDAC9-218ENST00000456174 COG6Q9Y2V7 657 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 NPHP3Q7Z494 1330 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 NASPP49321 788 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-218ENST00000456174 ALDH1L2Q3SY69 923 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 ZKSCAN2Q63HK3 967 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 MYRIPQ8NFW9 859 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 GAS2L2Q8NHY3 880 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 ZNF428Q96B54 188 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 TBC1D32Q96NH3 1257 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 CGNQ9P2M7 1197 aaKnown RBP9.38□□□□□ -0.91
HDAC9-218ENST00000456174 TNNQ9UQP3 1299 aa9.38□□□□□ -0.91
HDAC9-218ENST00000456174 MED1Q15648 1581 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-218ENST00000456174 CBX1P83916 185 aa9.37□□□□□ -0.91
HDAC9-218ENST00000456174 RTF1Q92541 710 aaKnown RBP9.37□□□□□ -0.91
HDAC9-218ENST00000456174 CLUAP1Q96AJ1 413 aa9.37□□□□□ -0.91
HDAC9-218ENST00000456174 VAMP4O75379 141 aa9.37□□□□□ -0.91
HDAC9-218ENST00000456174 RLBP1P12271 317 aa9.37□□□□□ -0.91
HDAC9-218ENST00000456174 GTF2F1P35269 517 aaKnown RBP eCLIP9.37□□□□□ -0.91
HDAC9-218ENST00000456174 ZNF710Q8N1W2 664 aa9.37□□□□□ -0.91
HDAC9-218ENST00000456174 USHBP1Q8N6Y0 703 aa9.37□□□□□ -0.91
HDAC9-218ENST00000456174 PDLIM2Q96JY6 352 aa9.37□□□□□ -0.91
HDAC9-218ENST00000456174 PXDNQ92626 1479 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 ELL2O00472 640 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-218ENST00000456174 ATP2B3Q16720 1220 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 NBPF6Q5VWK0 638 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 TSPYL6Q8N831 410 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 NBPF4Q96M43 638 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 ZKSCAN5Q9Y2L8 839 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 CRB1P82279 1406 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 KIF16BQ96L93 1317 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 CHL1O00533 1208 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 SEC24BO95487 1268 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 TWISTNBQ3B726 338 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-218ENST00000456174 DZIP1LQ8IYY4 767 aaKnown RBP9.36□□□□□ -0.91
HDAC9-218ENST00000456174 C8orf58Q8NAV2 365 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 YY1AP1Q9H869 796 aa9.36□□□□□ -0.91
HDAC9-218ENST00000456174 NOB1Q9ULX3 412 aaKnown RBP9.36□□□□□ -0.91
HDAC9-218ENST00000456174 TNS3Q68CZ2 1445 aa9.35□□□□□ -0.91
HDAC9-218ENST00000456174 CRYBG1Q9Y4K1 1723 aa9.35□□□□□ -0.91
HDAC9-218ENST00000456174 HTATSF1O43719 755 aaKnown RBP9.35□□□□□ -0.91
HDAC9-218ENST00000456174 TRIM27P14373 513 aa9.35□□□□□ -0.91
HDAC9-218ENST00000456174 RBM25P49756 843 aaKnown RBP9.35□□□□□ -0.91
HDAC9-218ENST00000456174 ATF7IPQ6VMQ6 1270 aa9.35□□□□□ -0.91
HDAC9-218ENST00000456174 LRRC37A3O60309 1634 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms