RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 UBA5Q9GZZ9 404 aa11.82□□□□□ -0.52
SCN5A-210ENST00000455624 MVPQ14764 893 aaKnown RBP11.82□□□□□ -0.52
SCN5A-210ENST00000455624 FKBP15Q5T1M5 1219 aa11.82□□□□□ -0.52
SCN5A-210ENST00000455624 HFM1A2PYH4 1435 aa11.82□□□□□ -0.52
SCN5A-210ENST00000455624 MINDY4BA8MYZ0 360 aa11.82□□□□□ -0.52
SCN5A-210ENST00000455624 SLC5A1P13866 664 aa11.82□□□□□ -0.52
SCN5A-210ENST00000455624 DRC1Q96MC2 740 aa11.82□□□□□ -0.52
SCN5A-210ENST00000455624 SPA17Q15506 151 aa11.81□□□□□ -0.52
SCN5A-210ENST00000455624 CCDC178Q5BJE1 867 aa11.81□□□□□ -0.52
SCN5A-210ENST00000455624 LIG1P18858 919 aa11.81□□□□□ -0.52
SCN5A-210ENST00000455624 HMGN5P82970 282 aaKnown RBP11.81□□□□□ -0.52
SCN5A-210ENST00000455624 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
SCN5A-210ENST00000455624 IFIT1P09914 478 aaKnown RBP11.81□□□□□ -0.52
SCN5A-210ENST00000455624 RBM10P98175 930 aaKnown RBP11.81□□□□□ -0.52
SCN5A-210ENST00000455624 KCNH5Q8NCM2 988 aa11.81□□□□□ -0.52
SCN5A-210ENST00000455624 IGF1RP08069 1367 aa11.81□□□□□ -0.52
SCN5A-210ENST00000455624 CASQ1P31415 396 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 TMEM266Q2M3C6 531 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 INCENPQ9NQS7 918 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 STAMBPO95630 424 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 DDX11Q96FC9 970 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 IL1RAPL2Q9NP60 686 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 SUPT6HQ7KZ85 1726 aaKnown RBP11.8□□□□□ -0.52
SCN5A-210ENST00000455624 WDR78Q5VTH9 848 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 ZNF444Q8N0Y2 327 aaPredicted RBP11.8□□□□□ -0.52
SCN5A-210ENST00000455624 PHAXQ9H814 394 aaKnown RBP11.8□□□□□ -0.52
SCN5A-210ENST00000455624 ZC3H6P61129 1189 aaKnown RBP11.8□□□□□ -0.52
SCN5A-210ENST00000455624 CCDC102AQ96A19 550 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
SCN5A-210ENST00000455624 SSRP1Q08945 709 aaKnown RBP11.8□□□□□ -0.52
SCN5A-210ENST00000455624 GOPCQ9HD26 462 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 ATAD2Q6PL18 1390 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 RAB11FIP3O75154 756 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 SLC12A5Q9H2X9 1139 aa11.8□□□□□ -0.52
SCN5A-210ENST00000455624 MAP2K1Q02750 393 aaPredicted RBP11.79□□□□□ -0.52
SCN5A-210ENST00000455624 TAF3Q5VWG9 929 aa11.79□□□□□ -0.52
SCN5A-210ENST00000455624 ATF7IPQ6VMQ6 1270 aa11.79□□□□□ -0.52
SCN5A-210ENST00000455624 KIAA1107Q9UPP5 1409 aa11.79□□□□□ -0.52
SCN5A-210ENST00000455624 BAG4O95429 457 aaKnown RBP11.79□□□□□ -0.52
SCN5A-210ENST00000455624 RPGRIP1LQ68CZ1 1315 aa11.79□□□□□ -0.52
SCN5A-210ENST00000455624 MRC2Q9UBG0 1479 aa11.79□□□□□ -0.52
SCN5A-210ENST00000455624 FGFR1OPO95684 399 aaKnown RBP11.78□□□□□ -0.52
SCN5A-210ENST00000455624 CAMK4Q16566 473 aa11.78□□□□□ -0.52
SCN5A-210ENST00000455624 DYDC1Q8WWB3 177 aa11.78□□□□□ -0.52
SCN5A-210ENST00000455624 CACNA2D4Q7Z3S7 1137 aa11.78□□□□□ -0.52
SCN5A-210ENST00000455624 CTNNBL1Q8WYA6 563 aaPredicted RBP11.78□□□□□ -0.52
SCN5A-210ENST00000455624 CCDC113Q9H0I3 377 aa11.78□□□□□ -0.52
SCN5A-210ENST00000455624 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
SCN5A-210ENST00000455624 ARHGAP29Q52LW3 1261 aa11.77□□□□□ -0.52
SCN5A-210ENST00000455624 NAPBQ9H115 298 aa11.77□□□□□ -0.52
SCN5A-210ENST00000455624 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.52
SCN5A-210ENST00000455624 NFE2L2Q16236 605 aa11.77□□□□□ -0.53
SCN5A-210ENST00000455624 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.53
SCN5A-210ENST00000455624 CFAP100Q494V2 611 aa11.77□□□□□ -0.53
SCN5A-210ENST00000455624 HOMER2Q9NSB8 354 aa11.77□□□□□ -0.53
SCN5A-210ENST00000455624 MIS18AQ9NYP9 233 aa11.77□□□□□ -0.53
SCN5A-210ENST00000455624 EPRSP07814 1512 aaKnown RBP11.77□□□□□ -0.53
SCN5A-210ENST00000455624 A0A087WZG4 1122 aa11.77□□□□□ -0.53
SCN5A-210ENST00000455624 RANBP6O60518 1105 aaKnown RBP11.77□□□□□ -0.53
SCN5A-210ENST00000455624 CA8P35219 290 aa11.77□□□□□ -0.53
SCN5A-210ENST00000455624 MAP3K12Q12852 859 aa11.77□□□□□ -0.53
SCN5A-210ENST00000455624 VPS36Q86VN1 386 aa11.77□□□□□ -0.53
SCN5A-210ENST00000455624 MPNDQ8N594 471 aa11.77□□□□□ -0.53
SCN5A-210ENST00000455624 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.77□□□□□ -0.53
SCN5A-210ENST00000455624 SLC12A7Q9Y666 1083 aa11.77□□□□□ -0.53
SCN5A-210ENST00000455624 NBPF1Q3BBV0 1214 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 RAB34Q9BZG1 259 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 UQCRHLA0A096LP55 91 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 UQCRHP07919 91 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 MAP3K11Q16584 847 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 CFTRP13569 1480 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 ANKRD18BA2A2Z9 1011 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 NLRP5P59047 1200 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 CTCFLQ8NI51 663 aaPredicted RBP11.76□□□□□ -0.53
SCN5A-210ENST00000455624 MPHOSPH6Q99547 160 aaKnown RBP11.76□□□□□ -0.53
SCN5A-210ENST00000455624 COMMD10Q9Y6G5 202 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 PRPF40BQ6NWY9 871 aaKnown RBP11.76□□□□□ -0.53
SCN5A-210ENST00000455624 CCDC83Q8IWF9 413 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 EFCAB5A4FU69 1503 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 GCOM1H8Y6P7 765 aaPredicted RBP11.76□□□□□ -0.53
SCN5A-210ENST00000455624 MYZAPP0CAP1 466 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 GRPEL1Q9HAV7 217 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 SLC52A1Q9NWF4 448 aa11.76□□□□□ -0.53
SCN5A-210ENST00000455624 NUDT16Q96DE0 195 aaKnown RBP11.75□□□□□ -0.53
SCN5A-210ENST00000455624 FAM135AQ9P2D6 1515 aa11.75□□□□□ -0.53
SCN5A-210ENST00000455624 NF2P35240 595 aa11.75□□□□□ -0.53
SCN5A-210ENST00000455624 BRPF3Q9ULD4 1205 aa11.75□□□□□ -0.53
SCN5A-210ENST00000455624 PABPN1LA6NDY0 278 aaKnown RBP11.75□□□□□ -0.53
SCN5A-210ENST00000455624 FCHSD2O94868 740 aa11.75□□□□□ -0.53
SCN5A-210ENST00000455624 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
SCN5A-210ENST00000455624 CCDC196A0A1B0GTZ2 297 aa11.75□□□□□ -0.53
SCN5A-210ENST00000455624 ADAMTS2O95450 1211 aa11.75□□□□□ -0.53
SCN5A-210ENST00000455624 GIGYF2Q6Y7W6 1299 aaKnown RBP11.75□□□□□ -0.53
SCN5A-210ENST00000455624 KIF1BPQ96EK5 621 aa11.75□□□□□ -0.53
SCN5A-210ENST00000455624 TRMT112Q9UI30 125 aaKnown RBP11.75□□□□□ -0.53
SCN5A-210ENST00000455624 DUSP27Q5VZP5 1158 aa11.75□□□□□ -0.53
SCN5A-210ENST00000455624 IFT140Q96RY7 1462 aa11.75□□□□□ -0.53
SCN5A-210ENST00000455624 USHBP1Q8N6Y0 703 aa11.75□□□□□ -0.53
SCN5A-210ENST00000455624 GOLGA6L10A0A0M3HER8 536 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms