RNA–Protein interactions for RNA: ENST00000455340.5

LINC00652-203, long intergenic non-protein coding RNA 652, humanhuman

TSL 2

Gene LINC00652, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00652-203ENST00000455340 APAF1O14727 1248 aa20.62■□□□□ 0.89
LINC00652-203ENST00000455340 HMGB2P26583 209 aaKnown RBP20.62■□□□□ 0.89
LINC00652-203ENST00000455340 CCNL1Q9UK58 526 aaPredicted RBP20.62■□□□□ 0.89
LINC00652-203ENST00000455340 ASAP1Q9ULH1 1129 aa20.62■□□□□ 0.89
LINC00652-203ENST00000455340 SLC27A3Q5K4L6 730 aa20.61■□□□□ 0.89
LINC00652-203ENST00000455340 TTC5Q8N0Z6 440 aa20.61■□□□□ 0.89
LINC00652-203ENST00000455340 RBM42Q9BTD8 480 aaKnown RBP20.61■□□□□ 0.89
LINC00652-203ENST00000455340 ATG3Q9NT62 314 aa20.61■□□□□ 0.89
LINC00652-203ENST00000455340 TOGARAM1Q9Y4F4 1720 aa20.6■□□□□ 0.89
LINC00652-203ENST00000455340 BTAF1O14981 1849 aa20.6■□□□□ 0.89
LINC00652-203ENST00000455340 BTBD11A6QL63 1104 aa20.59■□□□□ 0.89
LINC00652-203ENST00000455340 LOC102724428A0A0B4J2F2 783 aa20.57■□□□□ 0.88
LINC00652-203ENST00000455340 PTCD1O75127 700 aaKnown RBP20.57■□□□□ 0.88
LINC00652-203ENST00000455340 SIK1P57059 783 aa20.57■□□□□ 0.88
LINC00652-203ENST00000455340 CEMIPQ8WUJ3 1361 aa20.57■□□□□ 0.88
LINC00652-203ENST00000455340 ATP6V1AP38606 617 aa20.56■□□□□ 0.88
LINC00652-203ENST00000455340 SLC39A6Q13433 755 aa20.56■□□□□ 0.88
LINC00652-203ENST00000455340 TAF7Q15545 349 aaPredicted RBP20.56■□□□□ 0.88
LINC00652-203ENST00000455340 PROM2Q8N271 834 aa20.56■□□□□ 0.88
LINC00652-203ENST00000455340 THUMPD2Q9BTF0 503 aaKnown RBP20.56■□□□□ 0.88
LINC00652-203ENST00000455340 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
LINC00652-203ENST00000455340 ITGB4P16144 1822 aa20.55■□□□□ 0.88
LINC00652-203ENST00000455340 SCN11AQ9UI33 1791 aa20.55■□□□□ 0.88
LINC00652-203ENST00000455340 KCNQ4P56696 695 aa20.55■□□□□ 0.88
LINC00652-203ENST00000455340 SENP3-EIF4A1A0A087X0R7 540 aa20.54■□□□□ 0.88
LINC00652-203ENST00000455340 MRC1P22897 1456 aa20.54■□□□□ 0.88
LINC00652-203ENST00000455340 CALD1Q05682 793 aaKnown RBP20.53■□□□□ 0.88
LINC00652-203ENST00000455340 LRRC4BQ9NT99 713 aa20.53■□□□□ 0.88
LINC00652-203ENST00000455340 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
LINC00652-203ENST00000455340 LAS1LQ9Y4W2 734 aaKnown RBP20.53■□□□□ 0.88
LINC00652-203ENST00000455340 ZNF790Q6PG37 636 aa20.52■□□□□ 0.88
LINC00652-203ENST00000455340 RGPD3A6NKT7 1758 aaPredicted RBP20.51■□□□□ 0.87
LINC00652-203ENST00000455340 RGPD4Q7Z3J3 1758 aa20.51■□□□□ 0.87
LINC00652-203ENST00000455340 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
LINC00652-203ENST00000455340 TSPYL4Q9UJ04 414 aa20.51■□□□□ 0.87
LINC00652-203ENST00000455340 TRIM35Q9UPQ4 493 aa20.51■□□□□ 0.87
LINC00652-203ENST00000455340 AK7Q96M32 723 aa20.5■□□□□ 0.87
LINC00652-203ENST00000455340 MIS18AQ9NYP9 233 aa20.5■□□□□ 0.87
LINC00652-203ENST00000455340 ADAMTS7Q9UKP4 1686 aa20.5■□□□□ 0.87
LINC00652-203ENST00000455340 R3HDM1Q15032 1099 aaKnown RBP20.49■□□□□ 0.87
LINC00652-203ENST00000455340 TFCP2L1Q9NZI6 479 aa20.49■□□□□ 0.87
LINC00652-203ENST00000455340 PSDA5PKW4 1024 aaPredicted RBP20.48■□□□□ 0.87
LINC00652-203ENST00000455340 SLC15A2Q16348 729 aa20.48■□□□□ 0.87
LINC00652-203ENST00000455340 RREB1Q92766 1687 aa20.46■□□□□ 0.87
LINC00652-203ENST00000455340 KCNQ3O43525 872 aa20.46■□□□□ 0.87
LINC00652-203ENST00000455340 ITPK1Q13572 414 aa20.46■□□□□ 0.87
LINC00652-203ENST00000455340 VSIG10Q8N0Z9 540 aa20.46■□□□□ 0.87
LINC00652-203ENST00000455340 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
LINC00652-203ENST00000455340 ZNF496Q96IT1 587 aaPredicted RBP20.46■□□□□ 0.87
LINC00652-203ENST00000455340 ANO8Q9HCE9 1232 aaPredicted RBP20.46■□□□□ 0.87
LINC00652-203ENST00000455340 BABAM1Q9NWV8 329 aa20.46■□□□□ 0.87
LINC00652-203ENST00000455340 DLG5Q8TDM6 1919 aa20.46■□□□□ 0.87
LINC00652-203ENST00000455340 CCDC27Q2M243 656 aa20.45■□□□□ 0.86
LINC00652-203ENST00000455340 LINC00116Q8NCU8 138 aa20.45■□□□□ 0.86
LINC00652-203ENST00000455340 TEX13AQ9BXU3 409 aaPredicted RBP20.45■□□□□ 0.86
LINC00652-203ENST00000455340 LY75O60449 1722 aa20.44■□□□□ 0.86
LINC00652-203ENST00000455340 NUP188Q5SRE5 1749 aa20.44■□□□□ 0.86
LINC00652-203ENST00000455340 MSH5O43196 834 aa20.44■□□□□ 0.86
LINC00652-203ENST00000455340 STARD3NLO95772 234 aa20.44■□□□□ 0.86
LINC00652-203ENST00000455340 GNAI1P63096 354 aa20.44■□□□□ 0.86
LINC00652-203ENST00000455340 ZNF827Q17R98 1081 aa20.44■□□□□ 0.86
LINC00652-203ENST00000455340 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
LINC00652-203ENST00000455340 DNAJC10Q8IXB1 793 aa20.44■□□□□ 0.86
LINC00652-203ENST00000455340 SLC4A9Q96Q91 983 aa20.44■□□□□ 0.86
LINC00652-203ENST00000455340 HEG1Q9ULI3 1381 aa20.44■□□□□ 0.86
LINC00652-203ENST00000455340 VIRMAQ69YN4 1812 aaKnown RBP20.43■□□□□ 0.86
LINC00652-203ENST00000455340 SNRPA1P09661 255 aaKnown RBP20.43■□□□□ 0.86
LINC00652-203ENST00000455340 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
LINC00652-203ENST00000455340 AKT1S1Q96B36 256 aa20.43■□□□□ 0.86
LINC00652-203ENST00000455340 GNPATO15228 680 aa20.42■□□□□ 0.86
LINC00652-203ENST00000455340 CFAP44Q96MT7 982 aa20.42■□□□□ 0.86
LINC00652-203ENST00000455340 NPM2Q86SE8 214 aaKnown RBP20.41■□□□□ 0.86
LINC00652-203ENST00000455340 IFT57Q9NWB7 429 aa20.41■□□□□ 0.86
LINC00652-203ENST00000455340 RTCBQ9Y3I0 505 aaKnown RBP20.41■□□□□ 0.86
LINC00652-203ENST00000455340 CHL1O00533 1208 aa20.4■□□□□ 0.86
LINC00652-203ENST00000455340 PHF14O94880 888 aa20.4■□□□□ 0.86
LINC00652-203ENST00000455340 CRKLP46109 303 aaKnown RBP20.4■□□□□ 0.86
LINC00652-203ENST00000455340 EIF4A1P60842 406 aaKnown RBP20.4■□□□□ 0.86
LINC00652-203ENST00000455340 KCPQ6ZWJ8 1503 aa20.4■□□□□ 0.86
LINC00652-203ENST00000455340 FLAD1Q8NFF5 587 aa20.4■□□□□ 0.86
LINC00652-203ENST00000455340 PAPPAQ13219 1627 aa20.39■□□□□ 0.86
LINC00652-203ENST00000455340 CNTNAP4Q9C0A0 1308 aa20.39■□□□□ 0.85
LINC00652-203ENST00000455340 RC3H1Q5TC82 1133 aaKnown RBP20.39■□□□□ 0.85
LINC00652-203ENST00000455340 WDR63Q8IWG1 891 aa20.39■□□□□ 0.85
LINC00652-203ENST00000455340 CCDC87Q9NVE4 849 aa20.39■□□□□ 0.85
LINC00652-203ENST00000455340 SIPA1L3O60292 1781 aaPredicted RBP20.39■□□□□ 0.85
LINC00652-203ENST00000455340 CYP19A1P11511 503 aaPredicted RBP20.38■□□□□ 0.85
LINC00652-203ENST00000455340 MBIPQ9NS73 344 aa20.37■□□□□ 0.85
LINC00652-203ENST00000455340 C5P01031 1676 aa20.36■□□□□ 0.85
LINC00652-203ENST00000455340 IL16Q14005 1332 aa20.36■□□□□ 0.85
LINC00652-203ENST00000455340 RPS6KA4O75676 772 aa20.36■□□□□ 0.85
LINC00652-203ENST00000455340 CANXP27824 592 aaKnown RBP20.36■□□□□ 0.85
LINC00652-203ENST00000455340 SSFA2P28290 1259 aa20.36■□□□□ 0.85
LINC00652-203ENST00000455340 TRAPPC3LQ5T215 181 aa20.36■□□□□ 0.85
LINC00652-203ENST00000455340 ZNF330Q9Y3S2 320 aaPredicted RBP20.36■□□□□ 0.85
LINC00652-203ENST00000455340 C4BP0C0L5 1744 aa20.36■□□□□ 0.85
LINC00652-203ENST00000455340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.35■□□□□ 0.85
LINC00652-203ENST00000455340 GIGYF1O75420 1035 aaPredicted RBP20.35■□□□□ 0.85
LINC00652-203ENST00000455340 USP16Q9Y5T5 823 aa20.35■□□□□ 0.85
LINC00652-203ENST00000455340 PNPLA7Q6ZV29 1317 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms