RNA–Protein interactions for RNA: ENST00000454154.1

ARAFP3-201, Transcript of ARAF pseudogene 3, humanhuman

BASIC

Gene ARAFP3, Length 490 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAFP3-201ENST00000454154 MCM10Q7L590 875 aa11.76□□□□□ -0.53
ARAFP3-201ENST00000454154 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
ARAFP3-201ENST00000454154 ATG3Q9NT62 314 aa11.76□□□□□ -0.53
ARAFP3-201ENST00000454154 ASAP1Q9ULH1 1129 aa11.76□□□□□ -0.53
ARAFP3-201ENST00000454154 RRP7AQ9Y3A4 280 aaKnown RBP11.76□□□□□ -0.53
ARAFP3-201ENST00000454154 SIPA1L3O60292 1781 aaPredicted RBP11.76□□□□□ -0.53
ARAFP3-201ENST00000454154 LY75O60449 1722 aa11.75□□□□□ -0.53
ARAFP3-201ENST00000454154 TEFQ10587 303 aa11.75□□□□□ -0.53
ARAFP3-201ENST00000454154 SMARCC1Q92922 1105 aaPredicted RBP11.75□□□□□ -0.53
ARAFP3-201ENST00000454154 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
ARAFP3-201ENST00000454154 TAF7Q15545 349 aaPredicted RBP11.74□□□□□ -0.53
ARAFP3-201ENST00000454154 TXNRD1Q16881 649 aa11.74□□□□□ -0.53
ARAFP3-201ENST00000454154 TRIM35Q9UPQ4 493 aa11.74□□□□□ -0.53
ARAFP3-201ENST00000454154 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
ARAFP3-201ENST00000454154 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
ARAFP3-201ENST00000454154 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
ARAFP3-201ENST00000454154 LMOD3Q0VAK6 560 aa11.72□□□□□ -0.53
ARAFP3-201ENST00000454154 SLC39A6Q13433 755 aa11.72□□□□□ -0.53
ARAFP3-201ENST00000454154 LRRC4BQ9NT99 713 aa11.72□□□□□ -0.53
ARAFP3-201ENST00000454154 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
ARAFP3-201ENST00000454154 MRC1P22897 1456 aa11.71□□□□□ -0.53
ARAFP3-201ENST00000454154 SENP3-EIF4A1A0A087X0R7 540 aa11.71□□□□□ -0.53
ARAFP3-201ENST00000454154 BTBD11A6QL63 1104 aa11.71□□□□□ -0.53
ARAFP3-201ENST00000454154 KCNQ4P56696 695 aa11.71□□□□□ -0.53
ARAFP3-201ENST00000454154 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
ARAFP3-201ENST00000454154 SLC27A3Q5K4L6 730 aa11.71□□□□□ -0.53
ARAFP3-201ENST00000454154 RREB1Q92766 1687 aa11.71□□□□□ -0.54
ARAFP3-201ENST00000454154 PALLDQ8WX93 1383 aa11.7□□□□□ -0.54
ARAFP3-201ENST00000454154 LOC102724428A0A0B4J2F2 783 aa11.7□□□□□ -0.54
ARAFP3-201ENST00000454154 KCNQ3O43525 872 aa11.7□□□□□ -0.54
ARAFP3-201ENST00000454154 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
ARAFP3-201ENST00000454154 SIK1P57059 783 aa11.7□□□□□ -0.54
ARAFP3-201ENST00000454154 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
ARAFP3-201ENST00000454154 MIS18AQ9NYP9 233 aa11.7□□□□□ -0.54
ARAFP3-201ENST00000454154 CCNL1Q9UK58 526 aaPredicted RBP11.7□□□□□ -0.54
ARAFP3-201ENST00000454154 NUP188Q5SRE5 1749 aa11.69□□□□□ -0.54
ARAFP3-201ENST00000454154 CCDC27Q2M243 656 aa11.69□□□□□ -0.54
ARAFP3-201ENST00000454154 ZNF790Q6PG37 636 aa11.69□□□□□ -0.54
ARAFP3-201ENST00000454154 SLC4A9Q96Q91 983 aa11.69□□□□□ -0.54
ARAFP3-201ENST00000454154 SALL2Q9Y467 1007 aaPredicted RBP11.69□□□□□ -0.54
ARAFP3-201ENST00000454154 UBR2Q8IWV8 1755 aa11.69□□□□□ -0.54
ARAFP3-201ENST00000454154 MYH14Q7Z406 1995 aaKnown RBP11.68□□□□□ -0.54
ARAFP3-201ENST00000454154 ZNF831Q5JPB2 1677 aa11.68□□□□□ -0.54
ARAFP3-201ENST00000454154 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
ARAFP3-201ENST00000454154 ATP6V1AP38606 617 aa11.68□□□□□ -0.54
ARAFP3-201ENST00000454154 WWC1Q8IX03 1113 aa11.68□□□□□ -0.54
ARAFP3-201ENST00000454154 NGEFQ8N5V2 710 aa11.68□□□□□ -0.54
ARAFP3-201ENST00000454154 CHL1O00533 1208 aa11.67□□□□□ -0.54
ARAFP3-201ENST00000454154 HMGB2P26583 209 aaKnown RBP11.67□□□□□ -0.54
ARAFP3-201ENST00000454154 ITPK1Q13572 414 aa11.67□□□□□ -0.54
ARAFP3-201ENST00000454154 NBPF14Q5TI25 921 aa11.67□□□□□ -0.54
ARAFP3-201ENST00000454154 TTC5Q8N0Z6 440 aa11.67□□□□□ -0.54
ARAFP3-201ENST00000454154 ZNF496Q96IT1 587 aaPredicted RBP11.67□□□□□ -0.54
ARAFP3-201ENST00000454154 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
ARAFP3-201ENST00000454154 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
ARAFP3-201ENST00000454154 LAS1LQ9Y4W2 734 aaKnown RBP11.66□□□□□ -0.54
ARAFP3-201ENST00000454154 C5P01031 1676 aa11.65□□□□□ -0.54
ARAFP3-201ENST00000454154 ZNF853P0CG23 659 aa11.65□□□□□ -0.54
ARAFP3-201ENST00000454154 CALD1Q05682 793 aaKnown RBP11.65□□□□□ -0.54
ARAFP3-201ENST00000454154 WDR63Q8IWG1 891 aa11.65□□□□□ -0.54
ARAFP3-201ENST00000454154 VSIG10Q8N0Z9 540 aa11.65□□□□□ -0.54
ARAFP3-201ENST00000454154 LINC00116Q8NCU8 138 aa11.65□□□□□ -0.54
ARAFP3-201ENST00000454154 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
ARAFP3-201ENST00000454154 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
ARAFP3-201ENST00000454154 FMNL2Q96PY5 1086 aa11.65□□□□□ -0.54
ARAFP3-201ENST00000454154 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
ARAFP3-201ENST00000454154 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.55
ARAFP3-201ENST00000454154 COL5A3P25940 1745 aaPredicted RBP11.64□□□□□ -0.55
ARAFP3-201ENST00000454154 EIF4A1P60842 406 aaKnown RBP11.64□□□□□ -0.55
ARAFP3-201ENST00000454154 SLC15A2Q16348 729 aa11.64□□□□□ -0.55
ARAFP3-201ENST00000454154 RC3H1Q5TC82 1133 aaKnown RBP11.64□□□□□ -0.55
ARAFP3-201ENST00000454154 DNAJC10Q8IXB1 793 aa11.64□□□□□ -0.55
ARAFP3-201ENST00000454154 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
ARAFP3-201ENST00000454154 ANO8Q9HCE9 1232 aaPredicted RBP11.64□□□□□ -0.55
ARAFP3-201ENST00000454154 STK32BQ9NY57 414 aa11.64□□□□□ -0.55
ARAFP3-201ENST00000454154 HEG1Q9ULI3 1381 aa11.64□□□□□ -0.55
ARAFP3-201ENST00000454154 TJP1Q07157 1748 aa11.63□□□□□ -0.55
ARAFP3-201ENST00000454154 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
ARAFP3-201ENST00000454154 CYP19A1P11511 503 aaPredicted RBP11.63□□□□□ -0.55
ARAFP3-201ENST00000454154 GNAI1P63096 354 aa11.63□□□□□ -0.55
ARAFP3-201ENST00000454154 IFT57Q9NWB7 429 aa11.63□□□□□ -0.55
ARAFP3-201ENST00000454154 USP16Q9Y5T5 823 aa11.63□□□□□ -0.55
ARAFP3-201ENST00000454154 UBR3Q6ZT12 1888 aa11.63□□□□□ -0.55
ARAFP3-201ENST00000454154 C4BP0C0L5 1744 aa11.63□□□□□ -0.55
ARAFP3-201ENST00000454154 TUBGCP6Q96RT7 1819 aa11.63□□□□□ -0.55
ARAFP3-201ENST00000454154 IL16Q14005 1332 aa11.62□□□□□ -0.55
ARAFP3-201ENST00000454154 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
ARAFP3-201ENST00000454154 STARD3NLO95772 234 aa11.62□□□□□ -0.55
ARAFP3-201ENST00000454154 R3HDM1Q15032 1099 aaKnown RBP11.62□□□□□ -0.55
ARAFP3-201ENST00000454154 ZNF827Q17R98 1081 aa11.62□□□□□ -0.55
ARAFP3-201ENST00000454154 INTS5Q6P9B9 1019 aaKnown RBP11.62□□□□□ -0.55
ARAFP3-201ENST00000454154 CICQ96RK0 1608 aaPredicted RBP11.61□□□□□ -0.55
ARAFP3-201ENST00000454154 QSER1Q2KHR3 1735 aa11.61□□□□□ -0.55
ARAFP3-201ENST00000454154 PRAMEF22A3QJZ6 481 aa11.61□□□□□ -0.55
ARAFP3-201ENST00000454154 PSDA5PKW4 1024 aaPredicted RBP11.61□□□□□ -0.55
ARAFP3-201ENST00000454154 CRKLP46109 303 aaKnown RBP11.61□□□□□ -0.55
ARAFP3-201ENST00000454154 MBIPQ9NS73 344 aa11.61□□□□□ -0.55
ARAFP3-201ENST00000454154 TFCP2L1Q9NZI6 479 aa11.61□□□□□ -0.55
ARAFP3-201ENST00000454154 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
ARAFP3-201ENST00000454154 RPS6KA4O75676 772 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms