RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 C14orf37Q86TY3 774 aa22.64■■□□□ 1.21
MECP2-205ENST00000453960 DCCP43146 1447 aa22.64■■□□□ 1.21
MECP2-205ENST00000453960 HMMRO75330 724 aa22.62■■□□□ 1.21
MECP2-205ENST00000453960 TTC22Q5TAA0 569 aa22.62■■□□□ 1.21
MECP2-205ENST00000453960 USHBP1Q8N6Y0 703 aa22.62■■□□□ 1.21
MECP2-205ENST00000453960 ABCC6O95255 1503 aa22.62■■□□□ 1.21
MECP2-205ENST00000453960 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
MECP2-205ENST00000453960 STRCP1A6NGW2 1772 aa22.62■■□□□ 1.21
MECP2-205ENST00000453960 F6X3S4 739 aa22.62■■□□□ 1.21
MECP2-205ENST00000453960 CDC45O75419 566 aa22.62■■□□□ 1.21
MECP2-205ENST00000453960 AKAP4Q5JQC9 854 aa22.62■■□□□ 1.21
MECP2-205ENST00000453960 RGPD5Q99666 1765 aa22.62■■□□□ 1.21
MECP2-205ENST00000453960 KIF2CQ99661 725 aa22.61■■□□□ 1.21
MECP2-205ENST00000453960 C19orf44Q9H6X5 657 aa22.61■■□□□ 1.21
MECP2-205ENST00000453960 AMOTQ4VCS5 1084 aa22.6■■□□□ 1.21
MECP2-205ENST00000453960 CHMP4AQ9BY43 222 aa22.6■■□□□ 1.21
MECP2-205ENST00000453960 OSBPL3Q9H4L5 887 aa22.6■■□□□ 1.21
MECP2-205ENST00000453960 GNAI2P04899 355 aa22.6■■□□□ 1.21
MECP2-205ENST00000453960 GNAI3P08754 354 aa22.6■■□□□ 1.21
MECP2-205ENST00000453960 EIF4A1P60842 406 aaKnown RBP22.6■■□□□ 1.21
MECP2-205ENST00000453960 COL18A1P39060 1754 aa22.59■■□□□ 1.21
MECP2-205ENST00000453960 FRAT2O75474 233 aaPredicted RBP22.59■■□□□ 1.21
MECP2-205ENST00000453960 PLEKHG2Q9H7P9 1386 aa22.58■■□□□ 1.21
MECP2-205ENST00000453960 PLEKHO1Q53GL0 409 aaPredicted RBP22.58■■□□□ 1.21
MECP2-205ENST00000453960 HEG1Q9ULI3 1381 aa22.58■■□□□ 1.2
MECP2-205ENST00000453960 PROSER2Q86WR7 435 aaPredicted RBP22.57■■□□□ 1.2
MECP2-205ENST00000453960 PXDNQ92626 1479 aa22.57■■□□□ 1.2
MECP2-205ENST00000453960 SALL3Q9BXA9 1300 aa22.57■■□□□ 1.2
MECP2-205ENST00000453960 FKBP5Q13451 457 aaPredicted RBP22.57■■□□□ 1.2
MECP2-205ENST00000453960 KRT28Q7Z3Y7 464 aa22.57■■□□□ 1.2
MECP2-205ENST00000453960 LGR6Q9HBX8 967 aa22.57■■□□□ 1.2
MECP2-205ENST00000453960 SLC4A10Q6U841 1118 aa22.56■■□□□ 1.2
MECP2-205ENST00000453960 C16orf71Q8IYS4 520 aaPredicted RBP22.56■■□□□ 1.2
MECP2-205ENST00000453960 DDIT3P35638 169 aa22.55■■□□□ 1.2
MECP2-205ENST00000453960 ATP8B2P98198 1209 aa22.55■■□□□ 1.2
MECP2-205ENST00000453960 LRRC59Q96AG4 307 aaKnown RBP22.55■■□□□ 1.2
MECP2-205ENST00000453960 STRCQ7RTU9 1775 aa22.55■■□□□ 1.2
MECP2-205ENST00000453960 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
MECP2-205ENST00000453960 ANKRD24Q8TF21 1146 aa22.54■■□□□ 1.2
MECP2-205ENST00000453960 SLKQ9H2G2 1235 aaPredicted RBP22.54■■□□□ 1.2
MECP2-205ENST00000453960 SCN11AQ9UI33 1791 aa22.53■■□□□ 1.2
MECP2-205ENST00000453960 ZNF530Q6P9A1 599 aaPredicted RBP22.53■■□□□ 1.2
MECP2-205ENST00000453960 OTUD7AQ8TE49 926 aaPredicted RBP22.53■■□□□ 1.2
MECP2-205ENST00000453960 RNMTO43148 476 aaKnown RBP22.52■■□□□ 1.2
MECP2-205ENST00000453960 HSCBQ8IWL3 235 aa22.52■■□□□ 1.2
MECP2-205ENST00000453960 USP44Q9H0E7 712 aa22.52■■□□□ 1.2
MECP2-205ENST00000453960 IBTKQ9P2D0 1353 aaPredicted RBP22.51■■□□□ 1.19
MECP2-205ENST00000453960 GSE1Q14687 1217 aa22.51■■□□□ 1.19
MECP2-205ENST00000453960 CHMP5Q9NZZ3 219 aa22.51■■□□□ 1.19
MECP2-205ENST00000453960 AXIN2Q9Y2T1 843 aa22.51■■□□□ 1.19
MECP2-205ENST00000453960 ERBB3P21860 1342 aa22.5■■□□□ 1.19
MECP2-205ENST00000453960 SMARCA5O60264 1052 aaPredicted RBP22.49■■□□□ 1.19
MECP2-205ENST00000453960 SDSP20132 328 aa22.49■■□□□ 1.19
MECP2-205ENST00000453960 XPCQ01831 940 aaPredicted RBP22.49■■□□□ 1.19
MECP2-205ENST00000453960 SSH3Q8TE77 659 aa22.48■■□□□ 1.19
MECP2-205ENST00000453960 TMEM94Q12767 1356 aa22.48■■□□□ 1.19
MECP2-205ENST00000453960 PDE1AP54750 535 aa22.48■■□□□ 1.19
MECP2-205ENST00000453960 TEFQ10587 303 aa22.48■■□□□ 1.19
MECP2-205ENST00000453960 PHAXQ9H814 394 aaKnown RBP22.48■■□□□ 1.19
MECP2-205ENST00000453960 XIRP1Q702N8 1843 aaKnown RBP22.47■■□□□ 1.19
MECP2-205ENST00000453960 PNMA6EA0A0J9YXQ4 647 aa22.47■■□□□ 1.19
MECP2-205ENST00000453960 BTBD11A6QL63 1104 aa22.47■■□□□ 1.19
MECP2-205ENST00000453960 CERKQ8TCT0 537 aa22.47■■□□□ 1.19
MECP2-205ENST00000453960 USP26Q9BXU7 913 aa22.47■■□□□ 1.19
MECP2-205ENST00000453960 KCNQ3O43525 872 aa22.46■■□□□ 1.19
MECP2-205ENST00000453960 NECTIN2Q92692 538 aa22.46■■□□□ 1.19
MECP2-205ENST00000453960 STAP2Q9UGK3 403 aa22.46■■□□□ 1.19
MECP2-205ENST00000453960 CIZ1Q9ULV3 898 aaPredicted RBP22.46■■□□□ 1.19
MECP2-205ENST00000453960 PKD1L3Q7Z443 1732 aa22.46■■□□□ 1.19
MECP2-205ENST00000453960 POLA2Q14181 598 aa22.45■■□□□ 1.19
MECP2-205ENST00000453960 C1orf141Q5JVX7 400 aa22.45■■□□□ 1.19
MECP2-205ENST00000453960 BEND3Q5T5X7 828 aa22.45■■□□□ 1.18
MECP2-205ENST00000453960 MPRIPQ6WCQ1 1025 aa22.45■■□□□ 1.18
MECP2-205ENST00000453960 LRRCC1Q9C099 1032 aa22.45■■□□□ 1.18
MECP2-205ENST00000453960 SRCIN1Q9C0H9 1055 aa22.45■■□□□ 1.18
MECP2-205ENST00000453960 LRRFIP2Q9Y608 721 aaKnown RBP22.45■■□□□ 1.18
MECP2-205ENST00000453960 AOX1Q06278 1338 aa22.45■■□□□ 1.18
MECP2-205ENST00000453960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.44■■□□□ 1.18
MECP2-205ENST00000453960 CHPF2Q9P2E5 772 aa22.44■■□□□ 1.18
MECP2-205ENST00000453960 ADCY9O60503 1353 aa22.44■■□□□ 1.18
MECP2-205ENST00000453960 GIGYF1O75420 1035 aaPredicted RBP22.43■■□□□ 1.18
MECP2-205ENST00000453960 UBTFL1P0CB47 393 aaPredicted RBP22.43■■□□□ 1.18
MECP2-205ENST00000453960 TNS3Q68CZ2 1445 aa22.43■■□□□ 1.18
MECP2-205ENST00000453960 MRC1P22897 1456 aa22.43■■□□□ 1.18
MECP2-205ENST00000453960 ATF3P18847 181 aa22.43■■□□□ 1.18
MECP2-205ENST00000453960 DNAAF4Q8WXU2 420 aa22.43■■□□□ 1.18
MECP2-205ENST00000453960 RABEP1Q15276 862 aa22.42■■□□□ 1.18
MECP2-205ENST00000453960 DBF4Q9UBU7 674 aaPredicted RBP22.42■■□□□ 1.18
MECP2-205ENST00000453960 EXOC6BQ9Y2D4 811 aa22.42■■□□□ 1.18
MECP2-205ENST00000453960 ZBTB7CA1YPR0 619 aa22.41■■□□□ 1.18
MECP2-205ENST00000453960 CASC1Q6TDU7 716 aa22.41■■□□□ 1.18
MECP2-205ENST00000453960 K7ELQ4 463 aaPredicted RBP22.4■■□□□ 1.18
MECP2-205ENST00000453960 RAB11FIP3O75154 756 aa22.4■■□□□ 1.18
MECP2-205ENST00000453960 PARP4Q9UKK3 1724 aaKnown RBP22.4■■□□□ 1.18
MECP2-205ENST00000453960 CPDO75976 1380 aa22.4■■□□□ 1.18
MECP2-205ENST00000453960 C5P01031 1676 aa22.4■■□□□ 1.18
MECP2-205ENST00000453960 NPHP3Q7Z494 1330 aa22.4■■□□□ 1.18
MECP2-205ENST00000453960 CD2BP2O95400 341 aaKnown RBP22.4■■□□□ 1.18
MECP2-205ENST00000453960 MTX1Q13505 466 aa22.4■■□□□ 1.18
MECP2-205ENST00000453960 KDM6AO15550 1401 aaPredicted RBP22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms