RNA–Protein interactions for RNA: ENST00000452974.1

LCT-202, Transcript of lactase, humanhuman

TSL 1 (best)

Gene LCT, Length 3,508 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCT-202ENST00000452974 CDK12Q9NYV4 1490 aaPredicted RBP8.27□□□□□ -1.09
LCT-202ENST00000452974 KDM4FA0A1W2PPD8 638 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 ADAMTS2O95450 1211 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 OS9Q13438 667 aaPredicted RBP8.26□□□□□ -1.09
LCT-202ENST00000452974 TMEM51Q9NW97 253 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 CDC42BPGQ6DT37 1551 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 IGSF1Q8N6C5 1336 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 OVOS2A0A0J9YW53 1432 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 OVOS2Q6IE36 1432 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 NRXN3Q9Y4C0 1643 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 VGLL3A8MV65 326 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 KCNQ3O43525 872 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 MYL6BP14649 208 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 SPRYD3Q8NCJ5 442 aa8.26□□□□□ -1.09
LCT-202ENST00000452974 DIP2AQ14689 1571 aa8.25□□□□□ -1.09
LCT-202ENST00000452974 PIP4K2AP48426 406 aaPredicted RBP8.25□□□□□ -1.09
LCT-202ENST00000452974 PTCD1O75127 700 aaKnown RBP8.25□□□□□ -1.09
LCT-202ENST00000452974 MEIS3Q99687 375 aa8.25□□□□□ -1.09
LCT-202ENST00000452974 LRRC7Q96NW7 1537 aa8.25□□□□□ -1.09
LCT-202ENST00000452974 KAT6BQ8WYB5 2073 aa8.25□□□□□ -1.09
LCT-202ENST00000452974 FRAT2O75474 233 aaPredicted RBP8.25□□□□□ -1.09
LCT-202ENST00000452974 CHRM1P11229 460 aaPredicted RBP8.25□□□□□ -1.09
LCT-202ENST00000452974 FLIIQ13045 1269 aa8.25□□□□□ -1.09
LCT-202ENST00000452974 ANKARQ7Z5J8 1434 aa8.25□□□□□ -1.09
LCT-202ENST00000452974 ZNF853P0CG23 659 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 AMOTQ4VCS5 1084 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 MAP7D2Q96T17 732 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 SPG7Q9UQ90 795 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 KDM2BQ8NHM5 1336 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 USP31Q70CQ4 1352 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 ZBTB40Q9NUA8 1239 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 MAP3K5Q99683 1374 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.24□□□□□ -1.09
LCT-202ENST00000452974 HMMRO75330 724 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 CABP4P57796 275 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 BRINP3Q76B58 766 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 NFATC2IPQ8NCF5 419 aa8.24□□□□□ -1.09
LCT-202ENST00000452974 PHAXQ9H814 394 aaKnown RBP8.24□□□□□ -1.09
LCT-202ENST00000452974 C9orf78Q9NZ63 289 aaPredicted RBP8.24□□□□□ -1.09
LCT-202ENST00000452974 ARHGEF10O15013 1369 aa8.23□□□□□ -1.09
LCT-202ENST00000452974 BCCIPQ9P287 314 aaKnown RBP eCLIP8.23□□□□□ -1.09
LCT-202ENST00000452974 CHPF2Q9P2E5 772 aa8.23□□□□□ -1.09
LCT-202ENST00000452974 COL3A1P02461 1466 aaPredicted RBP8.23□□□□□ -1.09
LCT-202ENST00000452974 SMARCA5O60264 1052 aaPredicted RBP8.23□□□□□ -1.09
LCT-202ENST00000452974 AKAP4Q5JQC9 854 aa8.23□□□□□ -1.09
LCT-202ENST00000452974 PPP4R3BQ5MIZ7 849 aa8.23□□□□□ -1.09
LCT-202ENST00000452974 UTP14CQ5TAP6 766 aaKnown RBP8.23□□□□□ -1.09
LCT-202ENST00000452974 ANP32BQ92688 251 aaKnown RBP8.23□□□□□ -1.09
LCT-202ENST00000452974 EXOC6BQ9Y2D4 811 aa8.23□□□□□ -1.09
LCT-202ENST00000452974 PI4KAP2A4QPH2 592 aa8.22□□□□□ -1.09
LCT-202ENST00000452974 UBTFL1P0CB47 393 aaPredicted RBP8.22□□□□□ -1.09
LCT-202ENST00000452974 RIC3Q7Z5B4 369 aa8.22□□□□□ -1.09
LCT-202ENST00000452974 PI4KAP1Q8N8J0 262 aa8.22□□□□□ -1.09
LCT-202ENST00000452974 KIAA0232Q92628 1395 aa8.22□□□□□ -1.09
LCT-202ENST00000452974 ZBTB7BO15156 539 aaPredicted RBP8.22□□□□□ -1.09
LCT-202ENST00000452974 CHD1LQ86WJ1 897 aa8.22□□□□□ -1.09
LCT-202ENST00000452974 CHMP3Q9Y3E7 222 aa8.22□□□□□ -1.09
LCT-202ENST00000452974 C1orf167Q5SNV9 1468 aa8.22□□□□□ -1.09
LCT-202ENST00000452974 ARHGAP45Q92619 1136 aa8.21□□□□□ -1.09
LCT-202ENST00000452974 MAP2P11137 1827 aaKnown RBP8.21□□□□□ -1.09
LCT-202ENST00000452974 RNMTO43148 476 aaKnown RBP8.21□□□□□ -1.1
LCT-202ENST00000452974 IFNL2Q8IZJ0 200 aa8.21□□□□□ -1.1
LCT-202ENST00000452974 SLKQ9H2G2 1235 aaPredicted RBP8.21□□□□□ -1.1
LCT-202ENST00000452974 ERBB3P21860 1342 aa8.21□□□□□ -1.1
LCT-202ENST00000452974 GNAI2P04899 355 aa8.21□□□□□ -1.1
LCT-202ENST00000452974 CCT4P50991 539 aaKnown RBP8.21□□□□□ -1.1
LCT-202ENST00000452974 SRCIN1Q9C0H9 1055 aa8.21□□□□□ -1.1
LCT-202ENST00000452974 PRAMEF22A3QJZ6 481 aa8.2□□□□□ -1.1
LCT-202ENST00000452974 TRIM6-TRIM34B2RNG4 842 aa8.2□□□□□ -1.1
LCT-202ENST00000452974 HTATSF1O43719 755 aaKnown RBP8.2□□□□□ -1.1
LCT-202ENST00000452974 DMTNQ08495 405 aa8.2□□□□□ -1.1
LCT-202ENST00000452974 JARID2Q92833 1246 aaPredicted RBP8.2□□□□□ -1.1
LCT-202ENST00000452974 RBM42Q9BTD8 480 aaKnown RBP8.2□□□□□ -1.1
LCT-202ENST00000452974 PRDM10Q9NQV6 1147 aa8.2□□□□□ -1.1
LCT-202ENST00000452974 SURF6O75683 361 aaKnown RBP8.2□□□□□ -1.1
LCT-202ENST00000452974 GNAI3P08754 354 aa8.2□□□□□ -1.1
LCT-202ENST00000452974 BTG4Q9NY30 223 aa8.2□□□□□ -1.1
LCT-202ENST00000452974 LRRFIP2Q9Y608 721 aaKnown RBP8.2□□□□□ -1.1
LCT-202ENST00000452974 USP19O94966 1318 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 SEC24BO95487 1268 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 FBXO41Q8TF61 875 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 IL1RAPL2Q9NP60 686 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 SSH2Q76I76 1423 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 CDK11BP21127 795 aaKnown RBP8.19□□□□□ -1.1
LCT-202ENST00000452974 NEXNQ0ZGT2 675 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 TSHZ3Q63HK5 1081 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 C16orf71Q8IYS4 520 aaPredicted RBP8.19□□□□□ -1.1
LCT-202ENST00000452974 RILPL2Q969X0 211 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 PTPRCP08575 1304 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 DDX58O95786 925 aaKnown RBP8.19□□□□□ -1.1
LCT-202ENST00000452974 HDAC1Q13547 482 aaPredicted RBP8.19□□□□□ -1.1
LCT-202ENST00000452974 BECN1Q14457 450 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 C8orf34Q49A92 452 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 LARP1Q6PKG0 1096 aaKnown RBP8.19□□□□□ -1.1
LCT-202ENST00000452974 GCC1Q96CN9 775 aa8.19□□□□□ -1.1
LCT-202ENST00000452974 SPATA31A3Q5VYP0 1347 aa8.18□□□□□ -1.1
LCT-202ENST00000452974 SRGAP3O43295 1099 aa8.18□□□□□ -1.1
LCT-202ENST00000452974 EIF4A1P60842 406 aaKnown RBP8.18□□□□□ -1.1
LCT-202ENST00000452974 ZCRB1Q8TBF4 217 aaKnown RBP8.18□□□□□ -1.1
LCT-202ENST00000452974 DBF4Q9UBU7 674 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms