RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 ZFYVE9O95405 1425 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 SETSIPP0DME0 302 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 PPP2R1AP30153 589 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 RBM5P52756 815 aaKnown RBP eCLIP4.25□□□□□ -1.73
ATM-203ENST00000452508 RRS1Q15050 365 aaKnown RBP4.25□□□□□ -1.73
ATM-203ENST00000452508 SH2D4AQ9H788 454 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 SCAF11Q99590 1463 aaKnown RBP4.25□□□□□ -1.73
ATM-203ENST00000452508 UBTFL1P0CB47 393 aaPredicted RBP4.25□□□□□ -1.73
ATM-203ENST00000452508 RBM42Q9BTD8 480 aaKnown RBP4.25□□□□□ -1.73
ATM-203ENST00000452508 BCL2L13Q9BXK5 485 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 C14orf93Q9H972 538 aaKnown RBP4.25□□□□□ -1.73
ATM-203ENST00000452508 TMEM132AQ24JP5 1023 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.25□□□□□ -1.73
ATM-203ENST00000452508 CCDC178Q5BJE1 867 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 ZNF530Q6P9A1 599 aaPredicted RBP4.25□□□□□ -1.73
ATM-203ENST00000452508 CENPQQ7L2Z9 268 aaPredicted RBP4.25□□□□□ -1.73
ATM-203ENST00000452508 STK32BQ9NY57 414 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 PDE6BP35913 854 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 CCDC173Q0VFZ6 552 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 JMYQ8N9B5 988 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 UBE2Q2Q8WVN8 375 aa4.25□□□□□ -1.73
ATM-203ENST00000452508 RIPPLY1Q0D2K3 151 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 ANKRD18AQ8IVF6 992 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 OGFOD1Q8N543 542 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 CCDC191Q8NCU4 936 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 NECTIN2Q92692 538 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 ANKRD36BQ8N2N9 1353 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 BLMP54132 1417 aaPredicted RBP4.24□□□□□ -1.73
ATM-203ENST00000452508 HS1BP3Q53T59 392 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 CDC5LQ99459 802 aaKnown RBP4.24□□□□□ -1.73
ATM-203ENST00000452508 PCDH11XQ9BZA7 1347 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 PCDH11YQ9BZA8 1340 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 EFCAB6Q5THR3 1501 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 UGGT1Q9NYU2 1555 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 CCDC57Q2TAC2 916 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 CCDC61Q9Y6R9 512 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 TET3O43151 1660 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 SF3A1Q15459 793 aaKnown RBP4.24□□□□□ -1.73
ATM-203ENST00000452508 TMED8Q6PL24 325 aaPredicted RBP4.24□□□□□ -1.73
ATM-203ENST00000452508 NFXL1Q6ZNB6 911 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 RCAN3Q9UKA8 241 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 PHF8Q9UPP1 1060 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 MAST3O60307 1309 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 SOS1Q07889 1333 aaPredicted RBP4.24□□□□□ -1.73
ATM-203ENST00000452508 RGS3P49796 1198 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 ANKIB1Q9P2G1 1089 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 CROCC2H7BZ55 1655 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 HLA-DOAP06340 250 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 AXDND1Q5T1B0 1012 aaPredicted RBP4.24□□□□□ -1.73
ATM-203ENST00000452508 WASF1Q92558 559 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 PRAG1Q86YV5 1406 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 GOLGA6L9A6NEM1 432 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 SPDYE4A6NLX3 237 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 SUPT20HQ8NEM7 779 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 EYA3Q99504 573 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 PDZRN3Q9UPQ7 1066 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 PPP1R12BO60237 982 aaPredicted RBP4.24□□□□□ -1.73
ATM-203ENST00000452508 HSPA2P54652 639 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 PLCG2P16885 1265 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 HSP90B2PQ58FF3 399 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 CT47A1Q5JQC4 288 aaPredicted RBP4.24□□□□□ -1.73
ATM-203ENST00000452508 TTC39AQ5SRH9 613 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 GBP3Q9H0R5 595 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 FAM114A2Q9NRY5 505 aa4.24□□□□□ -1.73
ATM-203ENST00000452508 POTEB2H3BUK9 544 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 TERF1P54274 439 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 CGNQ9P2M7 1197 aaKnown RBP4.23□□□□□ -1.73
ATM-203ENST00000452508 PARP3Q9Y6F1 533 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 RIPK4P57078 832 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 ZNHIT6Q9NWK9 470 aaKnown RBP4.23□□□□□ -1.73
ATM-203ENST00000452508 NEMFO60524 1076 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 LDHCP07864 332 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 TNNI2P48788 182 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 ANKRD1Q15327 319 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 CHMP5Q9NZZ3 219 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 PRPF40AO75400 957 aaKnown RBP4.23□□□□□ -1.73
ATM-203ENST00000452508 EPS15P42566 896 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 TRIM22Q8IYM9 498 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 NPATQ14207 1427 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 RIMBP3CA6NJZ7 1639 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 RIMBP3BA6NNM3 1639 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 RIMBP3Q9UFD9 1639 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 TTF1Q15361 905 aaPredicted RBP4.23□□□□□ -1.73
ATM-203ENST00000452508 SYCP1Q15431 976 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 CNTROBQ8N137 903 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.23□□□□□ -1.736e-7■■■■■ 106.6
ATM-203ENST00000452508 SYNMO15061 1565 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 RBM25P49756 843 aaKnown RBP4.23□□□□□ -1.73
ATM-203ENST00000452508 DDX54Q8TDD1 881 aaKnown RBP4.23□□□□□ -1.73
ATM-203ENST00000452508 DNAAF4Q8WXU2 420 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 PNMA2Q9UL42 364 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 APBB1O00213 710 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 EIF3JO75822 258 aaKnown RBP4.23□□□□□ -1.73
ATM-203ENST00000452508 RTN4Q9NQC3 1192 aaKnown RBP4.23□□□□□ -1.73
ATM-203ENST00000452508 SLC5A4Q9NY91 659 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 SEC63Q9UGP8 760 aaKnown RBP4.23□□□□□ -1.73
ATM-203ENST00000452508 ADAMTS8Q9UP79 889 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 KIF20AO95235 890 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 FBLN1P23142 703 aa4.23□□□□□ -1.73
ATM-203ENST00000452508 ZNF804AQ7Z570 1209 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms