RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SPINT1O43278 529 aa6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 SOX11P35716 441 aa6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 ERVK-9P63128 1117 aa6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 SRPK2P78362 688 aaKnown RBP6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 RELBQ01201 579 aa6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 PWP2Q15269 919 aaKnown RBP6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 NAALADL2Q58DX5 795 aa6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 HDGFL1Q5TGJ6 251 aa6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 CCER1Q8TC90 406 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 MYH16Q9H6N6 1097 aa6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 CEP126Q9P2H0 1117 aa6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 SOS2Q07890 1332 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P21-201ENST00000452483 SOBPA7XYQ1 873 aa6.17□□□□□ -1.42
HMGB3P21-201ENST00000452483 MAN1A2O60476 641 aa6.17□□□□□ -1.42
HMGB3P21-201ENST00000452483 ADD1P35611 737 aaKnown RBP6.17□□□□□ -1.42
HMGB3P21-201ENST00000452483 SCTRP47872 440 aa6.17□□□□□ -1.42
HMGB3P21-201ENST00000452483 GIMAP6Q6P9H5 292 aa6.17□□□□□ -1.42
HMGB3P21-201ENST00000452483 DNAJC14Q6Y2X3 702 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P21-201ENST00000452483 TMEM88BA6NKF7 163 aa6.16□□□□□ -1.42
HMGB3P21-201ENST00000452483 TTLL8A6PVC2 850 aa6.16□□□□□ -1.42
HMGB3P21-201ENST00000452483 SEMA3FQ13275 785 aa6.16□□□□□ -1.42
HMGB3P21-201ENST00000452483 SLFNL1Q499Z3 407 aa6.16□□□□□ -1.42
HMGB3P21-201ENST00000452483 MICAL1Q8TDZ2 1067 aa6.16□□□□□ -1.42
HMGB3P21-201ENST00000452483 CCDC85AQ96PX6 553 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P21-201ENST00000452483 DNMT3LQ9UJW3 386 aa6.16□□□□□ -1.42
HMGB3P21-201ENST00000452483 PPME1Q9Y570 386 aa6.16□□□□□ -1.42
HMGB3P21-201ENST00000452483 ATP5J2-PTCD1G3V325 749 aa6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 GORABQ5T7V8 394 aa6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 CYP2U1Q7Z449 544 aa6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 RNF135Q8IUD6 432 aa6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 EXOC8Q8IYI6 725 aa6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 KDF1Q8NAX2 398 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 INSM2Q96T92 566 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 PPP1R12CQ9BZL4 782 aa6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 ZNF395Q9H8N7 513 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 POLMQ9NP87 494 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 DOLKQ9UPQ8 538 aa6.15□□□□□ -1.42
HMGB3P21-201ENST00000452483 LMOD1P29536 600 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P21-201ENST00000452483 PTGIRP43119 386 aa6.14□□□□□ -1.43
HMGB3P21-201ENST00000452483 CTSOP43234 321 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P21-201ENST00000452483 ZNF326Q5BKZ1 582 aaKnown RBP6.14□□□□□ -1.43
HMGB3P21-201ENST00000452483 ZNF662Q6ZS27 426 aa6.14□□□□□ -1.43
HMGB3P21-201ENST00000452483 PHTF2Q8N3S3 785 aa6.14□□□□□ -1.43
HMGB3P21-201ENST00000452483 CDCA7Q9BWT1 371 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P21-201ENST00000452483 TERTO14746 1132 aaKnown RBP6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 TPD52L2O43399 206 aaKnown RBP6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 MYCP01106 439 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 NFX1Q12986 1120 aaKnown RBP6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 CDCA8Q53HL2 280 aa6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 TREML4Q6UXN2 200 aa6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 DPH6Q7L8W6 267 aa6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 RNF217Q8TC41 542 aa6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 OSBPL3Q9H4L5 887 aa6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 ESF1Q9H501 851 aaKnown RBP6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 NXF1Q9UBU9 619 aaKnown RBP6.13□□□□□ -1.43
HMGB3P21-201ENST00000452483 FIGNL2A6NMB9 653 aa6.12□□□□□ -1.43
HMGB3P21-201ENST00000452483 RAB11FIP3O75154 756 aa6.12□□□□□ -1.43
HMGB3P21-201ENST00000452483 ATG7O95352 703 aa6.12□□□□□ -1.43
HMGB3P21-201ENST00000452483 OXLD1Q5BKU9 147 aa6.12□□□□□ -1.43
HMGB3P21-201ENST00000452483 ADAMTS19Q8TE59 1207 aa6.12□□□□□ -1.43
HMGB3P21-201ENST00000452483 ALG2Q9H553 416 aa6.12□□□□□ -1.43
HMGB3P21-201ENST00000452483 ARHGEF10LQ9HCE6 1279 aa6.12□□□□□ -1.43
HMGB3P21-201ENST00000452483 CHIC2Q9UKJ5 165 aa6.12□□□□□ -1.43
HMGB3P21-201ENST00000452483 A0A0U1RQG5 324 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P21-201ENST00000452483 MEN1O00255 615 aa6.11□□□□□ -1.43
HMGB3P21-201ENST00000452483 PIK3CDO00329 1044 aa6.11□□□□□ -1.43
HMGB3P21-201ENST00000452483 WFS1O76024 890 aa6.11□□□□□ -1.43
HMGB3P21-201ENST00000452483 VAMP1P23763 118 aa6.11□□□□□ -1.43
HMGB3P21-201ENST00000452483 TSGA10IPQ3SY00 556 aa6.11□□□□□ -1.43
HMGB3P21-201ENST00000452483 LCE2AQ5TA79 106 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P21-201ENST00000452483 NPAS3Q8IXF0 933 aa6.11□□□□□ -1.43
HMGB3P21-201ENST00000452483 PLPP7Q8NBV4 271 aa6.11□□□□□ -1.43
HMGB3P21-201ENST00000452483 TMA7Q9Y2S6 64 aaKnown RBP6.11□□□□□ -1.43
HMGB3P21-201ENST00000452483 A0A1W2PRU2 124 aa6.1□□□□□ -1.43
HMGB3P21-201ENST00000452483 PALM3A6NDB9 673 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P21-201ENST00000452483 H3BM21 787 aa6.1□□□□□ -1.43
HMGB3P21-201ENST00000452483 VEGFBP49765 207 aa6.1□□□□□ -1.43
HMGB3P21-201ENST00000452483 MARSP56192 900 aaKnown RBP6.1□□□□□ -1.43
HMGB3P21-201ENST00000452483 NOP9Q86U38 636 aaKnown RBP6.1□□□□□ -1.43
HMGB3P21-201ENST00000452483 TEX2Q8IWB9 1127 aa6.1□□□□□ -1.43
HMGB3P21-201ENST00000452483 RAB6BQ9NRW1 208 aa6.1□□□□□ -1.43
HMGB3P21-201ENST00000452483 SUGT1Q9Y2Z0 365 aa6.1□□□□□ -1.43
HMGB3P21-201ENST00000452483 ERCC5P28715 1186 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P21-201ENST00000452483 USP4Q13107 963 aa6.09□□□□□ -1.43
HMGB3P21-201ENST00000452483 CLN3Q13286 438 aa6.09□□□□□ -1.43
HMGB3P21-201ENST00000452483 MAP7D1Q3KQU3 841 aa6.09□□□□□ -1.43
HMGB3P21-201ENST00000452483 NOM1Q5C9Z4 860 aaKnown RBP6.09□□□□□ -1.43
HMGB3P21-201ENST00000452483 LCE2CQ5TA81 110 aa6.09□□□□□ -1.43
HMGB3P21-201ENST00000452483 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB3P21-201ENST00000452483 GNRH1P01148 92 aa6.08□□□□□ -1.44
HMGB3P21-201ENST00000452483 SKIP12755 728 aa6.08□□□□□ -1.44
HMGB3P21-201ENST00000452483 GPC1P35052 558 aa6.08□□□□□ -1.44
HMGB3P21-201ENST00000452483 RNF144AP50876 292 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P21-201ENST00000452483 PTSQ03393 145 aa6.08□□□□□ -1.44
HMGB3P21-201ENST00000452483 NFATC2IPQ8NCF5 419 aa6.08□□□□□ -1.44
HMGB3P21-201ENST00000452483 SLC16A10Q8TF71 515 aa6.08□□□□□ -1.44
HMGB3P21-201ENST00000452483 NLRP3Q96P20 1036 aa6.08□□□□□ -1.44
HMGB3P21-201ENST00000452483 UCN2Q96RP3 112 aa6.08□□□□□ -1.44
HMGB3P21-201ENST00000452483 BCL11AQ9H165 835 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms