RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 RGPD4Q7Z3J3 1758 aa31.63■■■□□ 2.65
CPSF4-207ENST00000451876 LMOD3Q0VAK6 560 aa31.63■■■□□ 2.65
CPSF4-207ENST00000451876 LY75O60449 1722 aa31.62■■■□□ 2.65
CPSF4-207ENST00000451876 APBA3O96018 575 aa31.62■■■□□ 2.65
CPSF4-207ENST00000451876 TEFQ10587 303 aa31.62■■■□□ 2.65
CPSF4-207ENST00000451876 SALL2Q9Y467 1007 aaPredicted RBP31.61■■■□□ 2.65
CPSF4-207ENST00000451876 CCDC125Q86Z20 511 aa31.6■■■□□ 2.65
CPSF4-207ENST00000451876 SF3B2Q13435 895 aaKnown RBP31.59■■■□□ 2.65
CPSF4-207ENST00000451876 ASAP1Q9ULH1 1129 aa31.59■■■□□ 2.65
CPSF4-207ENST00000451876 UBR2Q8IWV8 1755 aa31.58■■■□□ 2.65
CPSF4-207ENST00000451876 DEFB132Q7Z7B7 95 aa31.58■■■□□ 2.65
CPSF4-207ENST00000451876 KDM3BQ7LBC6 1761 aa31.58■■■□□ 2.65
CPSF4-207ENST00000451876 ATG3Q9NT62 314 aa31.57■■■□□ 2.64
CPSF4-207ENST00000451876 CCDC27Q2M243 656 aa31.55■■■□□ 2.64
CPSF4-207ENST00000451876 PALLDQ8WX93 1383 aa31.55■■■□□ 2.64
CPSF4-207ENST00000451876 EN1Q05925 392 aaPredicted RBP31.54■■■□□ 2.64
CPSF4-207ENST00000451876 SLC39A6Q13433 755 aa31.54■■■□□ 2.64
CPSF4-207ENST00000451876 WWC1Q8IX03 1113 aa31.54■■■□□ 2.64
CPSF4-207ENST00000451876 RREB1Q92766 1687 aa31.54■■■□□ 2.64
CPSF4-207ENST00000451876 BAG6P46379 1132 aa31.53■■■□□ 2.64
CPSF4-207ENST00000451876 NCBP3Q53F19 620 aaKnown RBP31.53■■■□□ 2.64
CPSF4-207ENST00000451876 PLSCR1O15162 318 aa31.53■■■□□ 2.64
CPSF4-207ENST00000451876 KCPQ6ZWJ8 1503 aa31.52■■■□□ 2.64
CPSF4-207ENST00000451876 TAF7Q15545 349 aaPredicted RBP31.52■■■□□ 2.64
CPSF4-207ENST00000451876 BTBD11A6QL63 1104 aa31.51■■■□□ 2.63
CPSF4-207ENST00000451876 MIS18AQ9NYP9 233 aa31.51■■■□□ 2.63
CPSF4-207ENST00000451876 SOCS7O14512 581 aa31.5■■■□□ 2.63
CPSF4-207ENST00000451876 EZH2Q15910 746 aaKnown RBP31.49■■■□□ 2.63
CPSF4-207ENST00000451876 CAMKK2Q96RR4 588 aa31.49■■■□□ 2.63
CPSF4-207ENST00000451876 KCNQ3O43525 872 aa31.49■■■□□ 2.63
CPSF4-207ENST00000451876 NUP188Q5SRE5 1749 aa31.48■■■□□ 2.63
CPSF4-207ENST00000451876 ZNF790Q6PG37 636 aa31.48■■■□□ 2.63
CPSF4-207ENST00000451876 PROM2Q8N271 834 aa31.48■■■□□ 2.63
CPSF4-207ENST00000451876 SMARCC1Q92922 1105 aaPredicted RBP31.48■■■□□ 2.63
CPSF4-207ENST00000451876 TAF1LQ8IZX4 1826 aa31.48■■■□□ 2.63
CPSF4-207ENST00000451876 ZNF831Q5JPB2 1677 aa31.47■■■□□ 2.63
CPSF4-207ENST00000451876 NGEFQ8N5V2 710 aa31.46■■■□□ 2.63
CPSF4-207ENST00000451876 ZNF521Q96K83 1311 aa31.46■■■□□ 2.63
CPSF4-207ENST00000451876 TJP1Q07157 1748 aa31.46■■■□□ 2.63
CPSF4-207ENST00000451876 KCNQ4P56696 695 aa31.46■■■□□ 2.63
CPSF4-207ENST00000451876 TXNRD1Q16881 649 aa31.46■■■□□ 2.63
CPSF4-207ENST00000451876 PTCD1O75127 700 aaKnown RBP31.45■■■□□ 2.62
CPSF4-207ENST00000451876 C5P01031 1676 aa31.44■■■□□ 2.62
CPSF4-207ENST00000451876 CICQ96RK0 1608 aaPredicted RBP31.44■■■□□ 2.62
CPSF4-207ENST00000451876 HNRNPUQ00839 825 aaKnown RBP eCLIP31.44■■■□□ 2.62
CPSF4-207ENST00000451876 TTC5Q8N0Z6 440 aa31.44■■■□□ 2.62
CPSF4-207ENST00000451876 SLC4A9Q96Q91 983 aa31.44■■■□□ 2.62
CPSF4-207ENST00000451876 LAS1LQ9Y4W2 734 aaKnown RBP31.44■■■□□ 2.62
CPSF4-207ENST00000451876 RBM42Q9BTD8 480 aaKnown RBP31.43■■■□□ 2.62
CPSF4-207ENST00000451876 LOC102724428A0A0B4J2F2 783 aa31.42■■■□□ 2.62
CPSF4-207ENST00000451876 SIK1P57059 783 aa31.42■■■□□ 2.62
CPSF4-207ENST00000451876 CALD1Q05682 793 aaKnown RBP31.42■■■□□ 2.62
CPSF4-207ENST00000451876 LRRC4BQ9NT99 713 aa31.42■■■□□ 2.62
CPSF4-207ENST00000451876 TSPYL4Q9UJ04 414 aa31.42■■■□□ 2.62
CPSF4-207ENST00000451876 COL5A3P25940 1745 aaPredicted RBP31.42■■■□□ 2.62
CPSF4-207ENST00000451876 ZNF496Q96IT1 587 aaPredicted RBP31.42■■■□□ 2.62
CPSF4-207ENST00000451876 CFAP44Q96MT7 982 aa31.42■■■□□ 2.62
CPSF4-207ENST00000451876 CHL1O00533 1208 aa31.41■■■□□ 2.62
CPSF4-207ENST00000451876 ZNF853P0CG23 659 aa31.41■■■□□ 2.62
CPSF4-207ENST00000451876 CCNL1Q9UK58 526 aaPredicted RBP31.41■■■□□ 2.62
CPSF4-207ENST00000451876 IFT57Q9NWB7 429 aa31.4■■■□□ 2.62
CPSF4-207ENST00000451876 WDR63Q8IWG1 891 aa31.39■■■□□ 2.62
CPSF4-207ENST00000451876 BABAM1Q9NWV8 329 aa31.38■■■□□ 2.61
CPSF4-207ENST00000451876 SPINK5Q9NQ38 1064 aaPredicted RBP31.38■■■□□ 2.61
CPSF4-207ENST00000451876 MBIPQ9NS73 344 aa31.38■■■□□ 2.61
CPSF4-207ENST00000451876 IL16Q14005 1332 aa31.37■■■□□ 2.61
CPSF4-207ENST00000451876 GNAI1P63096 354 aa31.37■■■□□ 2.61
CPSF4-207ENST00000451876 ITPK1Q13572 414 aa31.37■■■□□ 2.61
CPSF4-207ENST00000451876 SLC27A3Q5K4L6 730 aa31.37■■■□□ 2.61
CPSF4-207ENST00000451876 HEG1Q9ULI3 1381 aa31.36■■■□□ 2.61
CPSF4-207ENST00000451876 ATP6V1AP38606 617 aa31.36■■■□□ 2.61
CPSF4-207ENST00000451876 FMNL2Q96PY5 1086 aa31.35■■■□□ 2.61
CPSF4-207ENST00000451876 LAMB4A4D0S4 1761 aa31.35■■■□□ 2.61
CPSF4-207ENST00000451876 C4BP0C0L5 1744 aa31.35■■■□□ 2.61
CPSF4-207ENST00000451876 EIF4A1P60842 406 aaKnown RBP31.35■■■□□ 2.61
CPSF4-207ENST00000451876 TSR2Q969E8 191 aaKnown RBP31.35■■■□□ 2.61
CPSF4-207ENST00000451876 PRAMEF22A3QJZ6 481 aa31.31■■■□□ 2.6
CPSF4-207ENST00000451876 MYH14Q7Z406 1995 aaKnown RBP31.31■■■□□ 2.6
CPSF4-207ENST00000451876 KRT24Q2M2I5 525 aa31.31■■■□□ 2.6
CPSF4-207ENST00000451876 DNAJC10Q8IXB1 793 aa31.31■■■□□ 2.6
CPSF4-207ENST00000451876 VSIG10Q8N0Z9 540 aa31.31■■■□□ 2.6
CPSF4-207ENST00000451876 LINC00116Q8NCU8 138 aa31.31■■■□□ 2.6
CPSF4-207ENST00000451876 TUBGCP6Q96RT7 1819 aa31.3■■■□□ 2.6
CPSF4-207ENST00000451876 FANCIQ9NVI1 1328 aa31.3■■■□□ 2.6
CPSF4-207ENST00000451876 GOLGA2Q08379 1002 aa31.29■■■□□ 2.6
CPSF4-207ENST00000451876 CDCA7LQ96GN5 454 aa31.28■■■□□ 2.6
CPSF4-207ENST00000451876 ANO8Q9HCE9 1232 aaPredicted RBP31.27■■■□□ 2.6
CPSF4-207ENST00000451876 ZBED9Q6R2W3 1325 aa31.27■■■□□ 2.6
CPSF4-207ENST00000451876 GIGYF1O75420 1035 aaPredicted RBP31.26■■■□□ 2.59
CPSF4-207ENST00000451876 UBR3Q6ZT12 1888 aa31.25■■■□□ 2.59
CPSF4-207ENST00000451876 SNRPA1P09661 255 aaKnown RBP31.25■■■□□ 2.59
CPSF4-207ENST00000451876 ZNF827Q17R98 1081 aa31.24■■■□□ 2.59
CPSF4-207ENST00000451876 USP16Q9Y5T5 823 aa31.24■■■□□ 2.59
CPSF4-207ENST00000451876 CYP19A1P11511 503 aaPredicted RBP31.23■■■□□ 2.59
CPSF4-207ENST00000451876 SLFN5Q08AF3 891 aa31.23■■■□□ 2.59
CPSF4-207ENST00000451876 YTHDC1Q96MU7 727 aaKnown RBP31.22■■■□□ 2.59
CPSF4-207ENST00000451876 MYH16Q9H6N6 1097 aa31.22■■■□□ 2.59
CPSF4-207ENST00000451876 E9PSI1 815 aa31.21■■■□□ 2.59
CPSF4-207ENST00000451876 C8orf58Q8NAV2 365 aa31.21■■■□□ 2.59
CPSF4-207ENST00000451876 CRKLP46109 303 aaKnown RBP31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms