RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 ATG3Q9NT62 314 aa15.95■□□□□ 0.14
SMPD4-212ENST00000451542 TFCP2L1Q9NZI6 479 aa15.95■□□□□ 0.14
SMPD4-212ENST00000451542 ASAP1Q9ULH1 1129 aa15.95■□□□□ 0.14
SMPD4-212ENST00000451542 ATP6V1AP38606 617 aa15.94■□□□□ 0.14
SMPD4-212ENST00000451542 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
SMPD4-212ENST00000451542 FLAD1Q8NFF5 587 aa15.93■□□□□ 0.14
SMPD4-212ENST00000451542 LGR6Q9HBX8 967 aa15.93■□□□□ 0.14
SMPD4-212ENST00000451542 KCNQ4P56696 695 aa15.92■□□□□ 0.14
SMPD4-212ENST00000451542 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
SMPD4-212ENST00000451542 AKT1S1Q96B36 256 aa15.92■□□□□ 0.14
SMPD4-212ENST00000451542 AK7Q96M32 723 aa15.92■□□□□ 0.14
SMPD4-212ENST00000451542 VIRMAQ69YN4 1812 aaKnown RBP15.91■□□□□ 0.14
SMPD4-212ENST00000451542 SPON1Q9HCB6 807 aa15.91■□□□□ 0.14
SMPD4-212ENST00000451542 PAPPAQ13219 1627 aa15.9■□□□□ 0.14
SMPD4-212ENST00000451542 IL17REQ8NFR9 667 aa15.9■□□□□ 0.14
SMPD4-212ENST00000451542 SLC16A10Q8TF71 515 aa15.9■□□□□ 0.14
SMPD4-212ENST00000451542 MRC1P22897 1456 aa15.9■□□□□ 0.14
SMPD4-212ENST00000451542 C5P01031 1676 aa15.89■□□□□ 0.13
SMPD4-212ENST00000451542 PTCD1O75127 700 aaKnown RBP15.89■□□□□ 0.13
SMPD4-212ENST00000451542 LMOD3Q0VAK6 560 aa15.89■□□□□ 0.13
SMPD4-212ENST00000451542 NFE2L2Q16236 605 aa15.89■□□□□ 0.13
SMPD4-212ENST00000451542 ZNF827Q17R98 1081 aa15.89■□□□□ 0.13
SMPD4-212ENST00000451542 PLEKHF1Q96S99 279 aa15.89■□□□□ 0.13
SMPD4-212ENST00000451542 ADAMTS7Q9UKP4 1686 aa15.89■□□□□ 0.13
SMPD4-212ENST00000451542 MSH5O43196 834 aa15.88■□□□□ 0.13
SMPD4-212ENST00000451542 MTFR1LQ9H019 292 aa15.88■□□□□ 0.13
SMPD4-212ENST00000451542 TAF1LQ8IZX4 1826 aa15.88■□□□□ 0.13
SMPD4-212ENST00000451542 RUNDC1Q96C34 613 aa15.87■□□□□ 0.13
SMPD4-212ENST00000451542 PPP1R1BQ9UD71 204 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-212ENST00000451542 CEMIPQ8WUJ3 1361 aa15.87■□□□□ 0.13
SMPD4-212ENST00000451542 ZNF831Q5JPB2 1677 aa15.86■□□□□ 0.13
SMPD4-212ENST00000451542 QSER1Q2KHR3 1735 aa15.86■□□□□ 0.13
SMPD4-212ENST00000451542 BTBD11A6QL63 1104 aa15.86■□□□□ 0.13
SMPD4-212ENST00000451542 RC3H1Q5TC82 1133 aaKnown RBP15.86■□□□□ 0.13
SMPD4-212ENST00000451542 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
SMPD4-212ENST00000451542 PNISRQ8TF01 805 aaKnown RBP15.86■□□□□ 0.13
SMPD4-212ENST00000451542 LRP5O75197 1615 aa15.86■□□□□ 0.13
SMPD4-212ENST00000451542 GNPATO15228 680 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 ZBTB7AO95365 584 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 RIPK4P57078 832 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 SLC39A6Q13433 755 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 ITPK1Q13572 414 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 ZNF790Q6PG37 636 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 MCM10Q7L590 875 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 TEX13AQ9BXU3 409 aaPredicted RBP15.85■□□□□ 0.13
SMPD4-212ENST00000451542 MRS2Q9HD23 443 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 ADAMTS8Q9UP79 889 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 RTCBQ9Y3I0 505 aaKnown RBP15.85■□□□□ 0.13
SMPD4-212ENST00000451542 PNPLA7Q6ZV29 1317 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 C4BP0C0L5 1744 aa15.85■□□□□ 0.13
SMPD4-212ENST00000451542 SSFA2P28290 1259 aa15.84■□□□□ 0.13
SMPD4-212ENST00000451542 TAF7Q15545 349 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-212ENST00000451542 LINC00116Q8NCU8 138 aa15.84■□□□□ 0.13
SMPD4-212ENST00000451542 CNTNAP4Q9C0A0 1308 aa15.84■□□□□ 0.13
SMPD4-212ENST00000451542 CASZ1Q86V15 1759 aa15.83■□□□□ 0.12
SMPD4-212ENST00000451542 STARD3NLO95772 234 aa15.83■□□□□ 0.12
SMPD4-212ENST00000451542 ADRA2BP18089 450 aa15.83■□□□□ 0.12
SMPD4-212ENST00000451542 POLD1P28340 1107 aa15.83■□□□□ 0.12
SMPD4-212ENST00000451542 FMNL2Q96PY5 1086 aa15.83■□□□□ 0.12
SMPD4-212ENST00000451542 DLG5Q8TDM6 1919 aa15.82■□□□□ 0.12
SMPD4-212ENST00000451542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.82■□□□□ 0.12
SMPD4-212ENST00000451542 TMPOP42166 694 aaKnown RBP15.82■□□□□ 0.12
SMPD4-212ENST00000451542 DCTN1Q14203 1278 aa15.82■□□□□ 0.12
SMPD4-212ENST00000451542 CCDC146Q8IYE0 955 aa15.82■□□□□ 0.12
SMPD4-212ENST00000451542 ATF5Q9Y2D1 282 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-212ENST00000451542 PHF14O94880 888 aa15.81■□□□□ 0.12
SMPD4-212ENST00000451542 TRAPPC3LQ5T215 181 aa15.81■□□□□ 0.12
SMPD4-212ENST00000451542 NPM2Q86SE8 214 aaKnown RBP15.81■□□□□ 0.12
SMPD4-212ENST00000451542 COL23A1Q86Y22 540 aaPredicted RBP15.81■□□□□ 0.12
SMPD4-212ENST00000451542 SLC4A9Q96Q91 983 aa15.81■□□□□ 0.12
SMPD4-212ENST00000451542 PDGFDQ9GZP0 370 aaPredicted RBP15.81■□□□□ 0.12
SMPD4-212ENST00000451542 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-212ENST00000451542 RPS6KA4O75676 772 aa15.8■□□□□ 0.12
SMPD4-212ENST00000451542 CRKLP46109 303 aaKnown RBP15.8■□□□□ 0.12
SMPD4-212ENST00000451542 NEUROD2Q15784 382 aa15.8■□□□□ 0.12
SMPD4-212ENST00000451542 DNAJC10Q8IXB1 793 aa15.8■□□□□ 0.12
SMPD4-212ENST00000451542 HEG1Q9ULI3 1381 aa15.79■□□□□ 0.12
SMPD4-212ENST00000451542 RFC4P35249 363 aa15.79■□□□□ 0.12
SMPD4-212ENST00000451542 ZNF496Q96IT1 587 aaPredicted RBP15.79■□□□□ 0.12
SMPD4-212ENST00000451542 UBR3Q6ZT12 1888 aa15.79■□□□□ 0.12
SMPD4-212ENST00000451542 TUBGCP6Q96RT7 1819 aa15.79■□□□□ 0.12
SMPD4-212ENST00000451542 COL5A3P25940 1745 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-212ENST00000451542 SNRPA1P09661 255 aaKnown RBP15.78■□□□□ 0.12
SMPD4-212ENST00000451542 CCDC87Q9NVE4 849 aa15.78■□□□□ 0.12
SMPD4-212ENST00000451542 BABAM1Q9NWV8 329 aa15.78■□□□□ 0.12
SMPD4-212ENST00000451542 CICQ96RK0 1608 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-212ENST00000451542 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
SMPD4-212ENST00000451542 UBR2Q8IWV8 1755 aa15.77■□□□□ 0.12
SMPD4-212ENST00000451542 CYP19A1P11511 503 aaPredicted RBP15.77■□□□□ 0.12
SMPD4-212ENST00000451542 CALD1Q05682 793 aaKnown RBP15.77■□□□□ 0.12
SMPD4-212ENST00000451542 RRP7AQ9Y3A4 280 aaKnown RBP15.77■□□□□ 0.12
SMPD4-212ENST00000451542 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
SMPD4-212ENST00000451542 ARXQ96QS3 562 aa15.76■□□□□ 0.11
SMPD4-212ENST00000451542 TJP1Q07157 1748 aa15.76■□□□□ 0.11
SMPD4-212ENST00000451542 A0A087WZG4 1122 aa15.75■□□□□ 0.11
SMPD4-212ENST00000451542 APAF1O14727 1248 aa15.75■□□□□ 0.11
SMPD4-212ENST00000451542 PTGER2P43116 358 aa15.75■□□□□ 0.11
SMPD4-212ENST00000451542 CCDC184Q52MB2 194 aa15.75■□□□□ 0.11
SMPD4-212ENST00000451542 NLGN1Q8N2Q7 840 aa15.75■□□□□ 0.11
SMPD4-212ENST00000451542 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms