RNA–Protein interactions for RNA: ENST00000450656.5

POLR2B-206, Transcript of RNA polymerase II subunit B, humanhuman

TSL 4

Gene POLR2B, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-206ENST00000450656 ATG3Q9NT62 314 aa16.89■□□□□ 0.29
POLR2B-206ENST00000450656 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
POLR2B-206ENST00000450656 PNISRQ8TF01 805 aaKnown RBP16.88■□□□□ 0.29
POLR2B-206ENST00000450656 MRS2Q9HD23 443 aa16.88■□□□□ 0.29
POLR2B-206ENST00000450656 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
POLR2B-206ENST00000450656 LRRC4BQ9NT99 713 aa16.87■□□□□ 0.29
POLR2B-206ENST00000450656 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
POLR2B-206ENST00000450656 ASAP1Q9ULH1 1129 aa16.87■□□□□ 0.29
POLR2B-206ENST00000450656 LMOD3Q0VAK6 560 aa16.86■□□□□ 0.29
POLR2B-206ENST00000450656 TEFQ10587 303 aa16.86■□□□□ 0.29
POLR2B-206ENST00000450656 SIPA1L3O60292 1781 aaPredicted RBP16.85■□□□□ 0.29
POLR2B-206ENST00000450656 LOC102724428A0A0B4J2F2 783 aa16.85■□□□□ 0.29
POLR2B-206ENST00000450656 SIK1P57059 783 aa16.85■□□□□ 0.29
POLR2B-206ENST00000450656 TMPOP42166 694 aaKnown RBP16.84■□□□□ 0.29
POLR2B-206ENST00000450656 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
POLR2B-206ENST00000450656 CCER2I3L3R5 266 aa16.83■□□□□ 0.28
POLR2B-206ENST00000450656 C5P01031 1676 aa16.83■□□□□ 0.28
POLR2B-206ENST00000450656 SLC15A2Q16348 729 aa16.83■□□□□ 0.28
POLR2B-206ENST00000450656 KCPQ6ZWJ8 1503 aa16.83■□□□□ 0.28
POLR2B-206ENST00000450656 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
POLR2B-206ENST00000450656 ANO8Q9HCE9 1232 aaPredicted RBP16.83■□□□□ 0.28
POLR2B-206ENST00000450656 STK32BQ9NY57 414 aa16.83■□□□□ 0.28
POLR2B-206ENST00000450656 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
POLR2B-206ENST00000450656 RIPK4P57078 832 aa16.82■□□□□ 0.28
POLR2B-206ENST00000450656 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
POLR2B-206ENST00000450656 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
POLR2B-206ENST00000450656 DIEXFQ68CQ4 756 aaKnown RBP16.81■□□□□ 0.28
POLR2B-206ENST00000450656 ZNF790Q6PG37 636 aa16.81■□□□□ 0.28
POLR2B-206ENST00000450656 MCM10Q7L590 875 aa16.81■□□□□ 0.28
POLR2B-206ENST00000450656 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
POLR2B-206ENST00000450656 QSER1Q2KHR3 1735 aa16.8■□□□□ 0.28
POLR2B-206ENST00000450656 ATP6V1AP38606 617 aa16.8■□□□□ 0.28
POLR2B-206ENST00000450656 R3HDM1Q15032 1099 aaKnown RBP16.8■□□□□ 0.28
POLR2B-206ENST00000450656 TTC5Q8N0Z6 440 aa16.8■□□□□ 0.28
POLR2B-206ENST00000450656 BABAM1Q9NWV8 329 aa16.8■□□□□ 0.28
POLR2B-206ENST00000450656 C4BP0C0L5 1744 aa16.79■□□□□ 0.28
POLR2B-206ENST00000450656 DLG5Q8TDM6 1919 aa16.79■□□□□ 0.28
POLR2B-206ENST00000450656 BTBD11A6QL63 1104 aa16.79■□□□□ 0.28
POLR2B-206ENST00000450656 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
POLR2B-206ENST00000450656 SLC4A9Q96Q91 983 aa16.79■□□□□ 0.28
POLR2B-206ENST00000450656 TAF1LQ8IZX4 1826 aa16.78■□□□□ 0.28
POLR2B-206ENST00000450656 ITPK1Q13572 414 aa16.78■□□□□ 0.28
POLR2B-206ENST00000450656 DCTN1Q14203 1278 aa16.78■□□□□ 0.28
POLR2B-206ENST00000450656 ZNF827Q17R98 1081 aa16.78■□□□□ 0.28
POLR2B-206ENST00000450656 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
POLR2B-206ENST00000450656 CNTNAP4Q9C0A0 1308 aa16.77■□□□□ 0.28
POLR2B-206ENST00000450656 COL5A3P25940 1745 aaPredicted RBP16.77■□□□□ 0.28
POLR2B-206ENST00000450656 PTCD1O75127 700 aaKnown RBP16.77■□□□□ 0.28
POLR2B-206ENST00000450656 KCNQ4P56696 695 aa16.77■□□□□ 0.28
POLR2B-206ENST00000450656 CCDC27Q2M243 656 aa16.77■□□□□ 0.28
POLR2B-206ENST00000450656 RC3H1Q5TC82 1133 aaKnown RBP16.77■□□□□ 0.28
POLR2B-206ENST00000450656 TRIM35Q9UPQ4 493 aa16.77■□□□□ 0.28
POLR2B-206ENST00000450656 CASZ1Q86V15 1759 aa16.77■□□□□ 0.27
POLR2B-206ENST00000450656 TJP1Q07157 1748 aa16.76■□□□□ 0.27
POLR2B-206ENST00000450656 KAT6BQ8WYB5 2073 aa16.76■□□□□ 0.27
POLR2B-206ENST00000450656 APAF1O14727 1248 aa16.76■□□□□ 0.27
POLR2B-206ENST00000450656 SLC39A6Q13433 755 aa16.76■□□□□ 0.27
POLR2B-206ENST00000450656 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
POLR2B-206ENST00000450656 LINC00116Q8NCU8 138 aa16.76■□□□□ 0.27
POLR2B-206ENST00000450656 FLAD1Q8NFF5 587 aa16.76■□□□□ 0.27
POLR2B-206ENST00000450656 FMNL2Q96PY5 1086 aa16.76■□□□□ 0.27
POLR2B-206ENST00000450656 TEX13AQ9BXU3 409 aaPredicted RBP16.76■□□□□ 0.27
POLR2B-206ENST00000450656 HEG1Q9ULI3 1381 aa16.76■□□□□ 0.27
POLR2B-206ENST00000450656 PSDA5PKW4 1024 aaPredicted RBP16.75■□□□□ 0.27
POLR2B-206ENST00000450656 CALD1Q05682 793 aaKnown RBP16.75■□□□□ 0.27
POLR2B-206ENST00000450656 TFCP2L1Q9NZI6 479 aa16.75■□□□□ 0.27
POLR2B-206ENST00000450656 KDM3BQ7LBC6 1761 aa16.74■□□□□ 0.27
POLR2B-206ENST00000450656 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
POLR2B-206ENST00000450656 SSFA2P28290 1259 aa16.74■□□□□ 0.27
POLR2B-206ENST00000450656 ZNF496Q96IT1 587 aaPredicted RBP16.74■□□□□ 0.27
POLR2B-206ENST00000450656 AK7Q96M32 723 aa16.74■□□□□ 0.27
POLR2B-206ENST00000450656 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
POLR2B-206ENST00000450656 SLC16A10Q8TF71 515 aa16.73■□□□□ 0.27
POLR2B-206ENST00000450656 LRP5O75197 1615 aa16.73■□□□□ 0.27
POLR2B-206ENST00000450656 ADRA2BP18089 450 aa16.72■□□□□ 0.27
POLR2B-206ENST00000450656 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
POLR2B-206ENST00000450656 THUMPD2Q9BTF0 503 aaKnown RBP16.72■□□□□ 0.27
POLR2B-206ENST00000450656 CYP19A1P11511 503 aaPredicted RBP16.71■□□□□ 0.27
POLR2B-206ENST00000450656 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
POLR2B-206ENST00000450656 UBR3Q6ZT12 1888 aa16.7■□□□□ 0.26
POLR2B-206ENST00000450656 CHL1O00533 1208 aa16.7■□□□□ 0.26
POLR2B-206ENST00000450656 RPS6KA4O75676 772 aa16.7■□□□□ 0.26
POLR2B-206ENST00000450656 STARD3NLO95772 234 aa16.7■□□□□ 0.26
POLR2B-206ENST00000450656 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
POLR2B-206ENST00000450656 CRKLP46109 303 aaKnown RBP16.7■□□□□ 0.26
POLR2B-206ENST00000450656 DNAJC10Q8IXB1 793 aa16.7■□□□□ 0.26
POLR2B-206ENST00000450656 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
POLR2B-206ENST00000450656 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
POLR2B-206ENST00000450656 GNPATO15228 680 aa16.69■□□□□ 0.26
POLR2B-206ENST00000450656 KCNQ3O43525 872 aa16.69■□□□□ 0.26
POLR2B-206ENST00000450656 MTFR1LQ9H019 292 aa16.69■□□□□ 0.26
POLR2B-206ENST00000450656 CCDC87Q9NVE4 849 aa16.69■□□□□ 0.26
POLR2B-206ENST00000450656 IFT57Q9NWB7 429 aa16.69■□□□□ 0.26
POLR2B-206ENST00000450656 TSPYL4Q9UJ04 414 aa16.69■□□□□ 0.26
POLR2B-206ENST00000450656 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
POLR2B-206ENST00000450656 ZNF853P0CG23 659 aa16.68■□□□□ 0.26
POLR2B-206ENST00000450656 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
POLR2B-206ENST00000450656 INTS5Q6P9B9 1019 aaKnown RBP16.68■□□□□ 0.26
POLR2B-206ENST00000450656 WWC1Q8IX03 1113 aa16.68■□□□□ 0.26
POLR2B-206ENST00000450656 IL16Q14005 1332 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms