RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NOS1P29475 1434 aa10.34□□□□□ -0.75
LSM5-208ENST00000450169 PPIP5K1Q6PFW1 1433 aa10.34□□□□□ -0.75
LSM5-208ENST00000450169 SOX12O15370 315 aa10.34□□□□□ -0.75
LSM5-208ENST00000450169 IPO8O15397 1037 aaKnown RBP10.34□□□□□ -0.75
LSM5-208ENST00000450169 NOL10Q9BSC4 688 aaKnown RBP10.34□□□□□ -0.75
LSM5-208ENST00000450169 ST7Q9NRC1 585 aa10.34□□□□□ -0.75
LSM5-208ENST00000450169 RSPH14Q9UHP6 348 aa10.34□□□□□ -0.75
LSM5-208ENST00000450169 PLCH2O75038 1416 aa10.34□□□□□ -0.75
LSM5-208ENST00000450169 MAST1Q9Y2H9 1570 aa10.34□□□□□ -0.75
LSM5-208ENST00000450169 CEP152O94986 1710 aa10.34□□□□□ -0.75
LSM5-208ENST00000450169 TNNT1P13805 278 aa10.33□□□□□ -0.76
LSM5-208ENST00000450169 INTS3Q68E01 1043 aaKnown RBP10.33□□□□□ -0.76
LSM5-208ENST00000450169 SMYD5Q6GMV2 418 aa10.33□□□□□ -0.76
LSM5-208ENST00000450169 GDPD2Q9HCC8 539 aa10.33□□□□□ -0.76
LSM5-208ENST00000450169 ABCC1P33527 1531 aa10.33□□□□□ -0.76
LSM5-208ENST00000450169 AP5Z1O43299 807 aa10.33□□□□□ -0.76
LSM5-208ENST00000450169 RBM6P78332 1123 aaKnown RBP10.33□□□□□ -0.76
LSM5-208ENST00000450169 USP48Q86UV5 1035 aa10.33□□□□□ -0.76
LSM5-208ENST00000450169 GPIHBP1Q8IV16 184 aa10.33□□□□□ -0.76
LSM5-208ENST00000450169 CARD14Q9BXL6 1004 aa10.33□□□□□ -0.76
LSM5-208ENST00000450169 ABCC11Q96J66 1382 aa10.33□□□□□ -0.76
LSM5-208ENST00000450169 SMARCA5O60264 1052 aaPredicted RBP10.32□□□□□ -0.76
LSM5-208ENST00000450169 MX1P20591 662 aa10.32□□□□□ -0.76
LSM5-208ENST00000450169 CHMP4CQ96CF2 233 aa10.32□□□□□ -0.76
LSM5-208ENST00000450169 KIF1BPQ96EK5 621 aa10.32□□□□□ -0.76
LSM5-208ENST00000450169 RASSF4Q9H2L5 321 aa10.32□□□□□ -0.76
LSM5-208ENST00000450169 REC8O95072 547 aa10.32□□□□□ -0.76
LSM5-208ENST00000450169 PTGS1P23219 599 aa10.32□□□□□ -0.76
LSM5-208ENST00000450169 TMX3Q96JJ7 454 aa10.32□□□□□ -0.76
LSM5-208ENST00000450169 IFT57Q9NWB7 429 aa10.32□□□□□ -0.76
LSM5-208ENST00000450169 HDAC5Q9UQL6 1122 aa10.32□□□□□ -0.76
LSM5-208ENST00000450169 MED14O60244 1454 aa10.31□□□□□ -0.76
LSM5-208ENST00000450169 FOXD4L6Q3SYB3 417 aaPredicted RBP10.31□□□□□ -0.76
LSM5-208ENST00000450169 FBXO38Q6PIJ6 1188 aa10.31□□□□□ -0.76
LSM5-208ENST00000450169 FOXD4L3Q6VB84 417 aaPredicted RBP10.31□□□□□ -0.76
LSM5-208ENST00000450169 MADDQ8WXG6 1647 aa10.31□□□□□ -0.76
LSM5-208ENST00000450169 TRIM66O15016 1216 aa10.31□□□□□ -0.76
LSM5-208ENST00000450169 U2SURPO15042 1029 aaKnown RBP10.31□□□□□ -0.76
LSM5-208ENST00000450169 NOP2P46087 812 aaKnown RBP10.31□□□□□ -0.76
LSM5-208ENST00000450169 PDE4DQ08499 809 aa10.31□□□□□ -0.76
LSM5-208ENST00000450169 SLFNL1Q499Z3 407 aa10.31□□□□□ -0.76
LSM5-208ENST00000450169 CASC1Q6TDU7 716 aa10.31□□□□□ -0.76
LSM5-208ENST00000450169 FAM117AQ9C073 453 aa10.31□□□□□ -0.76
LSM5-208ENST00000450169 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.31□□□□□ -0.76
LSM5-208ENST00000450169 ATP10AO60312 1499 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 NLRP6P59044 892 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 TTC22Q5TAA0 569 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 IFNL1Q8IU54 200 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 TRAPPC8Q9Y2L5 1435 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 ADGRL1O94910 1474 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 CLGNO14967 610 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 DHX16O60231 1041 aaKnown RBP10.3□□□□□ -0.76
LSM5-208ENST00000450169 GTF2A1P52655 376 aaPredicted RBP10.3□□□□□ -0.76
LSM5-208ENST00000450169 CTR9Q6PD62 1173 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 MORC1Q86VD1 984 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 PLEKHM2Q8IWE5 1019 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 TMEM87AQ8NBN3 555 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 FUCA2Q9BTY2 467 aa10.3□□□□□ -0.76
LSM5-208ENST00000450169 PPRC1Q5VV67 1664 aaKnown RBP10.29□□□□□ -0.76
LSM5-208ENST00000450169 ADGRB2O60241 1585 aa10.29□□□□□ -0.76
LSM5-208ENST00000450169 MCM2P49736 904 aa10.29□□□□□ -0.76
LSM5-208ENST00000450169 CUL4AQ13619 759 aa10.29□□□□□ -0.76
LSM5-208ENST00000450169 MUM1L1Q5H9M0 696 aa10.29□□□□□ -0.76
LSM5-208ENST00000450169 ABCA9Q8IUA7 1624 aa10.29□□□□□ -0.76
LSM5-208ENST00000450169 RTF1Q92541 710 aaKnown RBP10.29□□□□□ -0.76
LSM5-208ENST00000450169 SLC52A1Q9NWF4 448 aa10.29□□□□□ -0.76
LSM5-208ENST00000450169 ZNF215Q9UL58 517 aaPredicted RBP10.29□□□□□ -0.76
LSM5-208ENST00000450169 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.29□□□□□ -0.76
LSM5-208ENST00000450169 CCDC61Q9Y6R9 512 aa10.29□□□□□ -0.76
LSM5-208ENST00000450169 UNC13BO14795 1591 aa10.29□□□□□ -0.76
LSM5-208ENST00000450169 ZNF518AQ6AHZ1 1483 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 LOC102724159A0A0B4J2E5 919 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 ZBTB7BO15156 539 aaPredicted RBP10.28□□□□□ -0.76
LSM5-208ENST00000450169 APPP05067 770 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 NEK4P51957 841 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 LRMPQ12912 555 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 BMS1Q14692 1282 aaKnown RBP10.28□□□□□ -0.76
LSM5-208ENST00000450169 PWP2Q15269 919 aaKnown RBP10.28□□□□□ -0.76
LSM5-208ENST00000450169 TPD52L1Q16890 204 aaPredicted RBP10.28□□□□□ -0.76
LSM5-208ENST00000450169 CEP135Q66GS9 1140 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 ZNF592Q92610 1267 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 INTS4Q96HW7 963 aaKnown RBP10.28□□□□□ -0.76
LSM5-208ENST00000450169 ZNF446Q9NWS9 450 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 ASXL2Q76L83 1435 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 WDR33Q9C0J8 1336 aaKnown RBP10.28□□□□□ -0.76
LSM5-208ENST00000450169 ELF2Q15723 593 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 SIRT2Q8IXJ6 389 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 DDX27Q96GQ7 796 aaKnown RBP10.28□□□□□ -0.76
LSM5-208ENST00000450169 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.28□□□□□ -0.76
LSM5-208ENST00000450169 V9GYY5 206 aaPredicted RBP10.28□□□□□ -0.76
LSM5-208ENST00000450169 ARAP3Q8WWN8 1544 aa10.28□□□□□ -0.76
LSM5-208ENST00000450169 UBE2HP62256 183 aa10.27□□□□□ -0.76
LSM5-208ENST00000450169 SRPK2P78362 688 aaKnown RBP10.27□□□□□ -0.76
LSM5-208ENST00000450169 AXDND1Q5T1B0 1012 aaPredicted RBP10.27□□□□□ -0.76
LSM5-208ENST00000450169 EFCAB2Q5VUJ9 269 aa10.27□□□□□ -0.76
LSM5-208ENST00000450169 GIMAP6Q6P9H5 292 aa10.27□□□□□ -0.76
LSM5-208ENST00000450169 CCDC186Q7Z3E2 898 aa10.27□□□□□ -0.76
LSM5-208ENST00000450169 TXLNBQ8N3L3 684 aa10.27□□□□□ -0.76
LSM5-208ENST00000450169 ERO1AQ96HE7 468 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms