RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 FAM198AQ9UFP1 575 aa11.42□□□□□ -0.58
NPHP1-208ENST00000449600 ABCA3Q99758 1704 aa11.42□□□□□ -0.58
NPHP1-208ENST00000449600 SBNO1A3KN83 1393 aa11.41□□□□□ -0.58
NPHP1-208ENST00000449600 ARHGEF10O15013 1369 aa11.41□□□□□ -0.58
NPHP1-208ENST00000449600 SHANK3Q9BYB0 1731 aa11.41□□□□□ -0.58
NPHP1-208ENST00000449600 KIF1AQ12756 1690 aa11.41□□□□□ -0.58
NPHP1-208ENST00000449600 MAP3K7O43318 606 aa11.4□□□□□ -0.58
NPHP1-208ENST00000449600 LAPTM4AQ15012 233 aa11.4□□□□□ -0.58
NPHP1-208ENST00000449600 C3orf80F5H4A9 247 aa11.39□□□□□ -0.59
NPHP1-208ENST00000449600 PRIM1P49642 420 aaKnown RBP11.39□□□□□ -0.59
NPHP1-208ENST00000449600 PSME1Q06323 249 aa11.39□□□□□ -0.59
NPHP1-208ENST00000449600 RGPD3A6NKT7 1758 aaPredicted RBP11.39□□□□□ -0.59
NPHP1-208ENST00000449600 COL14A1Q05707 1796 aaKnown RBP11.39□□□□□ -0.59
NPHP1-208ENST00000449600 RGPD4Q7Z3J3 1758 aa11.39□□□□□ -0.59
NPHP1-208ENST00000449600 SPATA31A1Q5TZJ5 1347 aa11.38□□□□□ -0.59
NPHP1-208ENST00000449600 SMAPO00193 183 aa11.38□□□□□ -0.59
NPHP1-208ENST00000449600 PRELPP51888 382 aa11.38□□□□□ -0.59
NPHP1-208ENST00000449600 PPP4CP60510 307 aa11.38□□□□□ -0.59
NPHP1-208ENST00000449600 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
NPHP1-208ENST00000449600 SAMD7Q7Z3H4 446 aa11.38□□□□□ -0.59
NPHP1-208ENST00000449600 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
NPHP1-208ENST00000449600 PDGFDQ9GZP0 370 aaPredicted RBP11.38□□□□□ -0.59
NPHP1-208ENST00000449600 PLSCR1O15162 318 aa11.37□□□□□ -0.59
NPHP1-208ENST00000449600 ZBTB7AO95365 584 aa11.37□□□□□ -0.59
NPHP1-208ENST00000449600 RPGRIP1LQ68CZ1 1315 aa11.36□□□□□ -0.59
NPHP1-208ENST00000449600 CLTCL1P53675 1640 aa11.36□□□□□ -0.59
NPHP1-208ENST00000449600 C11orf95C9JLR9 678 aaPredicted RBP11.36□□□□□ -0.59
NPHP1-208ENST00000449600 PRSS12P56730 875 aa11.36□□□□□ -0.59
NPHP1-208ENST00000449600 KIF1BO60333 1816 aa11.35□□□□□ -0.59
NPHP1-208ENST00000449600 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
NPHP1-208ENST00000449600 MTFR1LQ9H019 292 aa11.35□□□□□ -0.59
NPHP1-208ENST00000449600 TECPR2O15040 1411 aa11.35□□□□□ -0.59
NPHP1-208ENST00000449600 SPATA31E1Q6ZUB1 1445 aa11.35□□□□□ -0.59
NPHP1-208ENST00000449600 GFRA3O60609 400 aa11.34□□□□□ -0.59
NPHP1-208ENST00000449600 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
NPHP1-208ENST00000449600 BARGINQ6ZT62 677 aa11.34□□□□□ -0.59
NPHP1-208ENST00000449600 MTRQ99707 1265 aa11.34□□□□□ -0.59
NPHP1-208ENST00000449600 CARD11Q9BXL7 1154 aa11.34□□□□□ -0.59
NPHP1-208ENST00000449600 NRXN1Q9ULB1 1477 aa11.33□□□□□ -0.6
NPHP1-208ENST00000449600 ROCK2O75116 1388 aaKnown RBP11.33□□□□□ -0.6
NPHP1-208ENST00000449600 NUTM2FA1L443 756 aa11.33□□□□□ -0.6
NPHP1-208ENST00000449600 GPR162Q16538 588 aa11.33□□□□□ -0.6
NPHP1-208ENST00000449600 FMN2Q9NZ56 1722 aa11.32□□□□□ -0.6
NPHP1-208ENST00000449600 DIEXFQ68CQ4 756 aaKnown RBP11.32□□□□□ -0.6
NPHP1-208ENST00000449600 TRAF7Q6Q0C0 670 aa11.32□□□□□ -0.6
NPHP1-208ENST00000449600 DNAJC5GQ8N7S2 189 aa11.32□□□□□ -0.6
NPHP1-208ENST00000449600 TATDN2Q93075 761 aa11.32□□□□□ -0.6
NPHP1-208ENST00000449600 ARXQ96QS3 562 aa11.32□□□□□ -0.6
NPHP1-208ENST00000449600 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
NPHP1-208ENST00000449600 HSPA5P11021 654 aaKnown RBP11.31□□□□□ -0.6
NPHP1-208ENST00000449600 COL13A1Q5TAT6 717 aaPredicted RBP11.31□□□□□ -0.6
NPHP1-208ENST00000449600 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
NPHP1-208ENST00000449600 IL21Q9HBE4 155 aa11.31□□□□□ -0.6
NPHP1-208ENST00000449600 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
NPHP1-208ENST00000449600 ATP10DQ9P241 1426 aa11.29□□□□□ -0.6
NPHP1-208ENST00000449600 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
NPHP1-208ENST00000449600 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-208ENST00000449600 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
NPHP1-208ENST00000449600 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
NPHP1-208ENST00000449600 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
NPHP1-208ENST00000449600 V9GY48 417 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-208ENST00000449600 APLP1P51693 650 aa11.28□□□□□ -0.6
NPHP1-208ENST00000449600 WAPLQ7Z5K2 1190 aa11.28□□□□□ -0.6
NPHP1-208ENST00000449600 CDHR5Q9HBB8 845 aa11.28□□□□□ -0.6
NPHP1-208ENST00000449600 USP47Q96K76 1375 aa11.28□□□□□ -0.6
NPHP1-208ENST00000449600 SLC15A2Q16348 729 aa11.27□□□□□ -0.61
NPHP1-208ENST00000449600 GPBP1L1Q9HC44 474 aaPredicted RBP11.27□□□□□ -0.61
NPHP1-208ENST00000449600 PRDM11Q9NQV5 511 aa11.27□□□□□ -0.61
NPHP1-208ENST00000449600 ABCC11Q96J66 1382 aa11.27□□□□□ -0.61
NPHP1-208ENST00000449600 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
NPHP1-208ENST00000449600 TNS4Q8IZW8 715 aa11.26□□□□□ -0.61
NPHP1-208ENST00000449600 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
NPHP1-208ENST00000449600 HIRIP3Q9BW71 556 aaPredicted RBP11.26□□□□□ -0.61
NPHP1-208ENST00000449600 ALS2Q96Q42 1657 aa11.26□□□□□ -0.61
NPHP1-208ENST00000449600 EIF3AQ14152 1382 aaKnown RBP11.26□□□□□ -0.61
NPHP1-208ENST00000449600 PEAK1Q9H792 1746 aa11.26□□□□□ -0.61
NPHP1-208ENST00000449600 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
NPHP1-208ENST00000449600 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
NPHP1-208ENST00000449600 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
NPHP1-208ENST00000449600 GRIN3BO60391 1043 aa11.25□□□□□ -0.61
NPHP1-208ENST00000449600 OSBPP22059 807 aa11.25□□□□□ -0.61
NPHP1-208ENST00000449600 STK32BQ9NY57 414 aa11.25□□□□□ -0.61
NPHP1-208ENST00000449600 RBM27Q9P2N5 1060 aaKnown RBP11.25□□□□□ -0.61
NPHP1-208ENST00000449600 THRAP3Q9Y2W1 955 aaKnown RBP11.25□□□□□ -0.61
NPHP1-208ENST00000449600 TRPM3Q9HCF6 1732 aaPredicted RBP11.25□□□□□ -0.61
NPHP1-208ENST00000449600 CRYBG1Q9Y4K1 1723 aa11.25□□□□□ -0.61
NPHP1-208ENST00000449600 ADGRF5Q8IZF2 1346 aa11.25□□□□□ -0.61
NPHP1-208ENST00000449600 ADCY9O60503 1353 aa11.25□□□□□ -0.61
NPHP1-208ENST00000449600 PLEKHH1Q9ULM0 1364 aa11.25□□□□□ -0.61
NPHP1-208ENST00000449600 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
NPHP1-208ENST00000449600 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
NPHP1-208ENST00000449600 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
NPHP1-208ENST00000449600 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.24□□□□□ -0.61
NPHP1-208ENST00000449600 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
NPHP1-208ENST00000449600 AATKQ6ZMQ8 1374 aa11.24□□□□□ -0.61
NPHP1-208ENST00000449600 TRPM1Q7Z4N2 1603 aa11.24□□□□□ -0.61
NPHP1-208ENST00000449600 E2F4Q16254 413 aa11.23□□□□□ -0.61
NPHP1-208ENST00000449600 NBPF1Q3BBV0 1214 aa11.23□□□□□ -0.61
NPHP1-208ENST00000449600 TCP11L2Q8N4U5 519 aa11.23□□□□□ -0.61
NPHP1-208ENST00000449600 JMYQ8N9B5 988 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms