RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544		E9PSI1	815 aa		10.5	□□□□□ -0.73
HCG18-238	ENST00000449544	KCNQ2	O43526	872 aa		10.5	□□□□□ -0.73
HCG18-238	ENST00000449544	MYD88	Q99836	296 aa		10.5	□□□□□ -0.73
HCG18-238	ENST00000449544	SPATA31A5	Q5VU36	1347 aa		10.5	□□□□□ -0.73
HCG18-238	ENST00000449544	SPATA31A7	Q8IWB4	1347 aa		10.5	□□□□□ -0.73
HCG18-238	ENST00000449544	EYA3	Q99504	573 aa		10.5	□□□□□ -0.73
HCG18-238	ENST00000449544	ATP5J2-PTCD1	G3V325	749 aa		10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	DUSP27	Q5VZP5	1158 aa		10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	AIDA	Q96BJ3	306 aa		10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	UTP14A	Q9BVJ6	771 aa	Known RBP	10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	SRCIN1	Q9C0H9	1055 aa		10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	RNMT	O43148	476 aa	Known RBP	10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	APP	P05067	770 aa		10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	SLC16A10	Q8TF71	515 aa		10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	RBM17	Q96I25	401 aa	Known RBP	10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	HYPK	Q9NX55	129 aa		10.49	□□□□□ -0.73
HCG18-238	ENST00000449544	NIM1K	Q8IY84	436 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	PIM2	Q9P1W9	311 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	ASAP1	Q9ULH1	1129 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	PLXNC1	O60486	1568 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	LRRC7	Q96NW7	1537 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	ALDH1B1	P30837	517 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	SLC15A2	Q16348	729 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	CAVIN4	Q5BKX8	364 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	SLC4A3	P48751	1232 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	IFIT5	Q13325	482 aa	Known RBP	10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	MTHFSD	Q2M296	383 aa	Known RBP	10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	CEP126	Q9P2H0	1117 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	ADAMTS13	Q76LX8	1427 aa		10.48	□□□□□ -0.73
HCG18-238	ENST00000449544	TMPO	P42166	694 aa	Known RBP	10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	CCDC152	Q4G0S7	254 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	SOGA3	Q5TF21	947 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	ANXA1	P04083	346 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	BARGIN	Q6ZT62	677 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	ZFYVE9	O95405	1425 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	DCC	P43146	1447 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	RIMBP2	O15034	1052 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	IFIT2	P09913	472 aa	Known RBP	10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	PHKG2	P15735	406 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	USPL1	Q5W0Q7	1092 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	ANKRD13D	Q6ZTN6	518 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	MTFR1L	Q9H019	292 aa		10.47	□□□□□ -0.73
HCG18-238	ENST00000449544	OVOS2	A0A0G2JMS6	1433 aa		10.46	□□□□□ -0.73
HCG18-238	ENST00000449544	OVOS2	A0A0J9YW53	1432 aa		10.46	□□□□□ -0.73
HCG18-238	ENST00000449544	OVOS2	Q6IE36	1432 aa		10.46	□□□□□ -0.73
HCG18-238	ENST00000449544		H7C1D1	291 aa		10.46	□□□□□ -0.73
HCG18-238	ENST00000449544	ANKRD18A	Q8IVF6	992 aa		10.46	□□□□□ -0.73
HCG18-238	ENST00000449544	INO80	Q9ULG1	1556 aa	Predicted RBP	10.46	□□□□□ -0.73
HCG18-238	ENST00000449544	IK	Q13123	557 aa	Predicted RBP	10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	METTL24	Q5JXM2	366 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	ZNF790	Q6PG37	636 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	KIAA1211	Q6ZU35	1233 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	COPS6	Q7L5N1	327 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	RNF181	Q9P0P0	153 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	PALLD	Q8WX93	1383 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	PTCH1	Q13635	1447 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	TET3	O43151	1660 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	IFIT1	P09914	478 aa	Known RBP	10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	SUPT20H	Q8NEM7	779 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	TSR2	Q969E8	191 aa	Known RBP	10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	ABT1	Q9ULW3	272 aa	Known RBP	10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	USP6	P35125	1406 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	CRB1	P82279	1406 aa		10.46	□□□□□ -0.74
HCG18-238	ENST00000449544	WDR78	Q5VTH9	848 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	AATK	Q6ZMQ8	1374 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	ANKRD18B	A2A2Z9	1011 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	PPIP5K2	O43314	1243 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	A1BG	P04217	495 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	ZKSCAN2	Q63HK3	967 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	DPP8	Q6V1X1	898 aa	Predicted RBP	10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	SLC52A2	Q9HAB3	445 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	CWC25	Q9NXE8	425 aa	Predicted RBP	10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	ABCF2	Q9UG63	623 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	TRIM6-TRIM34	B2RNG4	842 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	XAGE3	Q8WTP9	111 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	AXIN2	Q9Y2T1	843 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	SYNM	O15061	1565 aa		10.45	□□□□□ -0.74
HCG18-238	ENST00000449544	DHX16	O60231	1041 aa	Known RBP	10.44	□□□□□ -0.74
HCG18-238	ENST00000449544	WASHC4	Q2M389	1173 aa		10.44	□□□□□ -0.74
HCG18-238	ENST00000449544	GNAI3	P08754	354 aa		10.44	□□□□□ -0.74
HCG18-238	ENST00000449544	IRX6	P78412	446 aa	Predicted RBP	10.44	□□□□□ -0.74
HCG18-238	ENST00000449544	EXOSC9	Q06265	439 aa	Known RBP	10.44	□□□□□ -0.74
HCG18-238	ENST00000449544	TTLL6	Q8N841	843 aa		10.44	□□□□□ -0.74
HCG18-238	ENST00000449544	CRKL	P46109	303 aa	Known RBP	10.44	□□□□□ -0.74
HCG18-238	ENST00000449544	SIL1	Q9H173	461 aa		10.44	□□□□□ -0.74
HCG18-238	ENST00000449544	SERPINB2	P05120	415 aa		10.44	□□□□□ -0.74
HCG18-238	ENST00000449544	ERFE	Q4G0M1	354 aa		10.44	□□□□□ -0.74
HCG18-238	ENST00000449544	ATP2B2	Q01814	1243 aa		10.43	□□□□□ -0.74
HCG18-238	ENST00000449544	PARP10	Q53GL7	1025 aa		10.43	□□□□□ -0.74
HCG18-238	ENST00000449544	HSP90AB4P	Q58FF6	505 aa		10.43	□□□□□ -0.74
HCG18-238	ENST00000449544	MARCH10	Q8NA82	808 aa	Predicted RBP	10.43	□□□□□ -0.74
HCG18-238	ENST00000449544	BIN2	Q9UBW5	565 aa	Predicted RBP	10.43	□□□□□ -0.74
HCG18-238	ENST00000449544	VPS53	Q5VIR6	699 aa		10.43	□□□□□ -0.74
HCG18-238	ENST00000449544	TESK2	Q96S53	571 aa		10.43	□□□□□ -0.74
HCG18-238	ENST00000449544	VEZT	Q9HBM0	779 aa		10.43	□□□□□ -0.74
HCG18-238	ENST00000449544	MYCN	P04198	464 aa	Predicted RBP	10.43	□□□□□ -0.74

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