RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 NEUROD6Q96NK8 337 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 TOMM22Q9NS69 142 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 DACT1Q9NYF0 836 aa14.73□□□□□ -0.05
UBE3B-204ENST00000449510 ABCC11Q96J66 1382 aa14.72□□□□□ -0.05
UBE3B-204ENST00000449510 BIN1O00499 593 aa14.72□□□□□ -0.05
UBE3B-204ENST00000449510 C14orf93Q9H972 538 aaKnown RBP14.72□□□□□ -0.05
UBE3B-204ENST00000449510 UBE2HP62256 183 aa14.72□□□□□ -0.05
UBE3B-204ENST00000449510 CCDC30Q5VVM6 783 aa14.72□□□□□ -0.05
UBE3B-204ENST00000449510 BOLA2Q9H3K6 86 aa14.72□□□□□ -0.05
UBE3B-204ENST00000449510 ZSCAN22P10073 491 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-204ENST00000449510 SYT1P21579 422 aa14.72□□□□□ -0.05
UBE3B-204ENST00000449510 GTF2F1P35269 517 aaKnown RBP eCLIP14.72□□□□□ -0.05
UBE3B-204ENST00000449510 LRMPQ12912 555 aa14.72□□□□□ -0.05
UBE3B-204ENST00000449510 RNF20Q5VTR2 975 aa14.72□□□□□ -0.05
UBE3B-204ENST00000449510 LRRC2Q9BYS8 371 aa14.72□□□□□ -0.05
UBE3B-204ENST00000449510 CCDC8Q9H0W5 538 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-204ENST00000449510 DNMT1P26358 1616 aaKnown RBP14.72□□□□□ -0.05
UBE3B-204ENST00000449510 ANO6Q4KMQ2 910 aa14.71□□□□□ -0.05
UBE3B-204ENST00000449510 MYRIPQ8NFW9 859 aa14.71□□□□□ -0.05
UBE3B-204ENST00000449510 DNAJC25Q9H1X3 360 aa14.71□□□□□ -0.05
UBE3B-204ENST00000449510 ARHGEF12Q9NZN5 1544 aa14.71□□□□□ -0.05
UBE3B-204ENST00000449510 ZNF500O60304 480 aaPredicted RBP14.71□□□□□ -0.05
UBE3B-204ENST00000449510 BLOC1S2Q6QNY1 142 aa14.71□□□□□ -0.05
UBE3B-204ENST00000449510 AACSQ86V21 672 aa14.71□□□□□ -0.05
UBE3B-204ENST00000449510 SMAP1Q8IYB5 467 aaPredicted RBP14.71□□□□□ -0.05
UBE3B-204ENST00000449510 KIF2CQ99661 725 aa14.71□□□□□ -0.05
UBE3B-204ENST00000449510 TPM3P06753 285 aa14.7□□□□□ -0.06
UBE3B-204ENST00000449510 AK2P54819 239 aa14.7□□□□□ -0.06
UBE3B-204ENST00000449510 NLRP6P59044 892 aa14.7□□□□□ -0.06
UBE3B-204ENST00000449510 WDR62O43379 1518 aa14.7□□□□□ -0.06
UBE3B-204ENST00000449510 CCDC66A2RUB6 948 aa14.7□□□□□ -0.06
UBE3B-204ENST00000449510 HSP90AA4PQ58FG1 418 aa14.7□□□□□ -0.06
UBE3B-204ENST00000449510 HSP90AB2PQ58FF8 381 aa14.7□□□□□ -0.06
UBE3B-204ENST00000449510 FBXO31Q5XUX0 539 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-204ENST00000449510 WDR7Q9Y4E6 1490 aa14.69□□□□□ -0.06
UBE3B-204ENST00000449510 USHBP1Q8N6Y0 703 aa14.69□□□□□ -0.06
UBE3B-204ENST00000449510 ERCC4Q92889 916 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-204ENST00000449510 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-204ENST00000449510 CPLX1O14810 134 aa14.69□□□□□ -0.06
UBE3B-204ENST00000449510 TEX35Q5T0J7 233 aa14.69□□□□□ -0.06
UBE3B-204ENST00000449510 PIBF1Q8WXW3 757 aa14.69□□□□□ -0.06
UBE3B-204ENST00000449510 ZSWIM4Q9H7M6 989 aa14.69□□□□□ -0.06
UBE3B-204ENST00000449510 PDCP20941 246 aa14.68□□□□□ -0.06
UBE3B-204ENST00000449510 PPP1R42Q7Z4L9 355 aa14.68□□□□□ -0.06
UBE3B-204ENST00000449510 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
UBE3B-204ENST00000449510 FLIIQ13045 1269 aa14.68□□□□□ -0.06
UBE3B-204ENST00000449510 RAB11FIP4Q86YS3 637 aa14.68□□□□□ -0.06
UBE3B-204ENST00000449510 PYCARDQ9ULZ3 195 aa14.68□□□□□ -0.06
UBE3B-204ENST00000449510 GCC2Q8IWJ2 1684 aa14.68□□□□□ -0.06
UBE3B-204ENST00000449510 CHMLP26374 656 aa14.67□□□□□ -0.06
UBE3B-204ENST00000449510 NAA30Q147X3 362 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-204ENST00000449510 ARHGAP45Q92619 1136 aa14.67□□□□□ -0.06
UBE3B-204ENST00000449510 MBD5Q9P267 1494 aa14.67□□□□□ -0.06
UBE3B-204ENST00000449510 CCT2P78371 535 aaKnown RBP14.67□□□□□ -0.06
UBE3B-204ENST00000449510 URI1O94763 535 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-204ENST00000449510 F13A1P00488 732 aa14.66□□□□□ -0.06
UBE3B-204ENST00000449510 BRPF1P55201 1214 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-204ENST00000449510 CEP135Q66GS9 1140 aa14.66□□□□□ -0.06
UBE3B-204ENST00000449510 IL16Q14005 1332 aa14.66□□□□□ -0.06
UBE3B-204ENST00000449510 PPIP5K1Q6PFW1 1433 aa14.66□□□□□ -0.06
UBE3B-204ENST00000449510 GRIN2AQ12879 1464 aa14.66□□□□□ -0.06
UBE3B-204ENST00000449510 A0A087WWV3 80 aa14.66□□□□□ -0.06
UBE3B-204ENST00000449510 PNMA6EA0A0J9YXQ4 647 aa14.66□□□□□ -0.06
UBE3B-204ENST00000449510 PSMA5P28066 241 aa14.65□□□□□ -0.06
UBE3B-204ENST00000449510 SKILP12757 684 aa14.65□□□□□ -0.06
UBE3B-204ENST00000449510 GTF3C6Q969F1 213 aa14.65□□□□□ -0.06
UBE3B-204ENST00000449510 SYCP2Q9BX26 1530 aa14.65□□□□□ -0.06
UBE3B-204ENST00000449510 APPP05067 770 aa14.65□□□□□ -0.06
UBE3B-204ENST00000449510 TYRO3Q06418 890 aa14.65□□□□□ -0.06
UBE3B-204ENST00000449510 NUDT16Q96DE0 195 aaKnown RBP14.65□□□□□ -0.06
UBE3B-204ENST00000449510 ARGLU1Q9NWB6 273 aaPredicted RBP14.65□□□□□ -0.06
UBE3B-204ENST00000449510 NRBP1Q9UHY1 535 aa14.65□□□□□ -0.06
UBE3B-204ENST00000449510 BRD1O95696 1058 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 SERPINC1P01008 464 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 SYNE3Q6ZMZ3 975 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 UBXN4Q92575 508 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 ZDHHC9Q9Y397 364 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 UNC5CLQ8IV45 518 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 STK38Q15208 465 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 UVSSAQ2YD98 709 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 RIC3Q7Z5B4 369 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 KIF18AQ8NI77 898 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 SAMD9Q5K651 1589 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 A0A1W2PP64 1363 aa14.64□□□□□ -0.07
UBE3B-204ENST00000449510 ATP2B3Q16720 1220 aa14.63□□□□□ -0.07
UBE3B-204ENST00000449510 PA2G4Q9UQ80 394 aaKnown RBP14.63□□□□□ -0.07
UBE3B-204ENST00000449510 TRAPPC8Q9Y2L5 1435 aa14.63□□□□□ -0.07
UBE3B-204ENST00000449510 FAM200AQ8TCP9 573 aa14.63□□□□□ -0.07
UBE3B-204ENST00000449510 USP16Q9Y5T5 823 aa14.63□□□□□ -0.07
UBE3B-204ENST00000449510 MYL6BP14649 208 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 RAPGEF6Q8TEU7 1601 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 GPS2Q13227 327 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 WASHC4Q2M389 1173 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 HSP90AB4PQ58FF6 505 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 GOLGA6L1Q8N7Z2 621 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 SLC26A8Q96RN1 970 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 PLA2R1Q13018 1463 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 MSH6P52701 1360 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 CSB-PGBD3P0DP91 1061 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 RHPN1Q8TCX5 695 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms