RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 BTAF1O14981 1849 aa17.28■□□□□ 0.36
ERGIC3-209ENST00000447986 HTATSF1O43719 755 aaKnown RBP17.27■□□□□ 0.36
ERGIC3-209ENST00000447986 NFE2L2Q16236 605 aa17.27■□□□□ 0.36
ERGIC3-209ENST00000447986 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.36
ERGIC3-209ENST00000447986 RGPD3A6NKT7 1758 aaPredicted RBP17.27■□□□□ 0.35
ERGIC3-209ENST00000447986 RGPD4Q7Z3J3 1758 aa17.27■□□□□ 0.35
ERGIC3-209ENST00000447986 HMGB2P26583 209 aaKnown RBP17.26■□□□□ 0.35
ERGIC3-209ENST00000447986 TEFQ10587 303 aa17.26■□□□□ 0.35
ERGIC3-209ENST00000447986 CCDC146Q8IYE0 955 aa17.26■□□□□ 0.35
ERGIC3-209ENST00000447986 NFATC2IPQ8NCF5 419 aa17.26■□□□□ 0.35
ERGIC3-209ENST00000447986 PNISRQ8TF01 805 aaKnown RBP17.26■□□□□ 0.35
ERGIC3-209ENST00000447986 SLC52A2Q9HAB3 445 aa17.26■□□□□ 0.35
ERGIC3-209ENST00000447986 LGR6Q9HBX8 967 aa17.26■□□□□ 0.35
ERGIC3-209ENST00000447986 TXNRD1Q16881 649 aa17.25■□□□□ 0.35
ERGIC3-209ENST00000447986 SLC27A3Q5K4L6 730 aa17.25■□□□□ 0.35
ERGIC3-209ENST00000447986 ITGB4P16144 1822 aa17.25■□□□□ 0.35
ERGIC3-209ENST00000447986 PALLDQ8WX93 1383 aa17.24■□□□□ 0.35
ERGIC3-209ENST00000447986 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
ERGIC3-209ENST00000447986 LMOD3Q0VAK6 560 aa17.24■□□□□ 0.35
ERGIC3-209ENST00000447986 IL17REQ8NFR9 667 aa17.24■□□□□ 0.35
ERGIC3-209ENST00000447986 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
ERGIC3-209ENST00000447986 RIPK4P57078 832 aa17.23■□□□□ 0.35
ERGIC3-209ENST00000447986 NBPF14Q5TI25 921 aa17.23■□□□□ 0.35
ERGIC3-209ENST00000447986 TMPOP42166 694 aaKnown RBP17.22■□□□□ 0.35
ERGIC3-209ENST00000447986 CEMIPQ8WUJ3 1361 aa17.22■□□□□ 0.35
ERGIC3-209ENST00000447986 MRC1P22897 1456 aa17.22■□□□□ 0.35
ERGIC3-209ENST00000447986 ADAMTS7Q9UKP4 1686 aa17.22■□□□□ 0.35
ERGIC3-209ENST00000447986 MCM10Q7L590 875 aa17.21■□□□□ 0.35
ERGIC3-209ENST00000447986 CCNL1Q9UK58 526 aaPredicted RBP17.21■□□□□ 0.35
ERGIC3-209ENST00000447986 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
ERGIC3-209ENST00000447986 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
ERGIC3-209ENST00000447986 PROM2Q8N271 834 aa17.21■□□□□ 0.35
ERGIC3-209ENST00000447986 ATG3Q9NT62 314 aa17.21■□□□□ 0.35
ERGIC3-209ENST00000447986 RREB1Q92766 1687 aa17.2■□□□□ 0.34
ERGIC3-209ENST00000447986 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
ERGIC3-209ENST00000447986 DCTN1Q14203 1278 aa17.19■□□□□ 0.34
ERGIC3-209ENST00000447986 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
ERGIC3-209ENST00000447986 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
ERGIC3-209ENST00000447986 LOC102724428A0A0B4J2F2 783 aa17.18■□□□□ 0.34
ERGIC3-209ENST00000447986 SIK1P57059 783 aa17.18■□□□□ 0.34
ERGIC3-209ENST00000447986 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
ERGIC3-209ENST00000447986 BTBD11A6QL63 1104 aa17.18■□□□□ 0.34
ERGIC3-209ENST00000447986 APAF1O14727 1248 aa17.18■□□□□ 0.34
ERGIC3-209ENST00000447986 LY75O60449 1722 aa17.17■□□□□ 0.34
ERGIC3-209ENST00000447986 ATP6V1AP38606 617 aa17.17■□□□□ 0.34
ERGIC3-209ENST00000447986 LRRC4BQ9NT99 713 aa17.17■□□□□ 0.34
ERGIC3-209ENST00000447986 STK32BQ9NY57 414 aa17.17■□□□□ 0.34
ERGIC3-209ENST00000447986 VIRMAQ69YN4 1812 aaKnown RBP17.16■□□□□ 0.34
ERGIC3-209ENST00000447986 NUP188Q5SRE5 1749 aa17.16■□□□□ 0.34
ERGIC3-209ENST00000447986 PTCD1O75127 700 aaKnown RBP17.16■□□□□ 0.34
ERGIC3-209ENST00000447986 TAF7Q15545 349 aaPredicted RBP17.16■□□□□ 0.34
ERGIC3-209ENST00000447986 MIER1Q8N108 512 aa17.16■□□□□ 0.34
ERGIC3-209ENST00000447986 SLC39A6Q13433 755 aa17.15■□□□□ 0.34
ERGIC3-209ENST00000447986 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
ERGIC3-209ENST00000447986 DLG5Q8TDM6 1919 aa17.15■□□□□ 0.34
ERGIC3-209ENST00000447986 KCNQ4P56696 695 aa17.14■□□□□ 0.33
ERGIC3-209ENST00000447986 CALD1Q05682 793 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-209ENST00000447986 SLC15A2Q16348 729 aa17.13■□□□□ 0.33
ERGIC3-209ENST00000447986 THUMPD2Q9BTF0 503 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-209ENST00000447986 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
ERGIC3-209ENST00000447986 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
ERGIC3-209ENST00000447986 R3HDM1Q15032 1099 aaKnown RBP17.11■□□□□ 0.33
ERGIC3-209ENST00000447986 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
ERGIC3-209ENST00000447986 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
ERGIC3-209ENST00000447986 ANO8Q9HCE9 1232 aaPredicted RBP17.11■□□□□ 0.33
ERGIC3-209ENST00000447986 SIPA1L3O60292 1781 aaPredicted RBP17.11■□□□□ 0.33
ERGIC3-209ENST00000447986 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
ERGIC3-209ENST00000447986 AK7Q96M32 723 aa17.1■□□□□ 0.33
ERGIC3-209ENST00000447986 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
ERGIC3-209ENST00000447986 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
ERGIC3-209ENST00000447986 ITPK1Q13572 414 aa17.1■□□□□ 0.33
ERGIC3-209ENST00000447986 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
ERGIC3-209ENST00000447986 AKT1S1Q96B36 256 aa17.1■□□□□ 0.33
ERGIC3-209ENST00000447986 TFCP2L1Q9NZI6 479 aa17.1■□□□□ 0.33
ERGIC3-209ENST00000447986 C5P01031 1676 aa17.09■□□□□ 0.33
ERGIC3-209ENST00000447986 PSDA5PKW4 1024 aaPredicted RBP17.09■□□□□ 0.33
ERGIC3-209ENST00000447986 ZNF496Q96IT1 587 aaPredicted RBP17.09■□□□□ 0.33
ERGIC3-209ENST00000447986 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
ERGIC3-209ENST00000447986 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
ERGIC3-209ENST00000447986 TSPYL4Q9UJ04 414 aa17.09■□□□□ 0.33
ERGIC3-209ENST00000447986 KCPQ6ZWJ8 1503 aa17.09■□□□□ 0.33
ERGIC3-209ENST00000447986 HEG1Q9ULI3 1381 aa17.08■□□□□ 0.33
ERGIC3-209ENST00000447986 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.32
ERGIC3-209ENST00000447986 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
ERGIC3-209ENST00000447986 ZNF827Q17R98 1081 aa17.07■□□□□ 0.32
ERGIC3-209ENST00000447986 LAS1LQ9Y4W2 734 aaKnown RBP17.07■□□□□ 0.32
ERGIC3-209ENST00000447986 UBR2Q8IWV8 1755 aa17.07■□□□□ 0.32
ERGIC3-209ENST00000447986 FLAD1Q8NFF5 587 aa17.07■□□□□ 0.32
ERGIC3-209ENST00000447986 C4BP0C0L5 1744 aa17.06■□□□□ 0.32
ERGIC3-209ENST00000447986 KCNQ3O43525 872 aa17.06■□□□□ 0.32
ERGIC3-209ENST00000447986 STARD3NLO95772 234 aa17.06■□□□□ 0.32
ERGIC3-209ENST00000447986 RC3H1Q5TC82 1133 aaKnown RBP17.06■□□□□ 0.32
ERGIC3-209ENST00000447986 DNAJC10Q8IXB1 793 aa17.06■□□□□ 0.32
ERGIC3-209ENST00000447986 CFAP44Q96MT7 982 aa17.06■□□□□ 0.32
ERGIC3-209ENST00000447986 CNTNAP4Q9C0A0 1308 aa17.06■□□□□ 0.32
ERGIC3-209ENST00000447986 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
ERGIC3-209ENST00000447986 SNRPA1P09661 255 aaKnown RBP17.05■□□□□ 0.32
ERGIC3-209ENST00000447986 GNAI1P63096 354 aa17.05■□□□□ 0.32
ERGIC3-209ENST00000447986 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
ERGIC3-209ENST00000447986 CICQ96RK0 1608 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms