RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 WWC3Q9ULE0 1092 aa8.26□□□□□ -1.09
LINC01880-201ENST00000446593 ROCK2O75116 1388 aaKnown RBP8.25□□□□□ -1.09
LINC01880-201ENST00000446593 NSD2O96028 1365 aa8.25□□□□□ -1.09
LINC01880-201ENST00000446593 COL13A1Q5TAT6 717 aaPredicted RBP8.25□□□□□ -1.09
LINC01880-201ENST00000446593 MPRIPQ6WCQ1 1025 aa8.25□□□□□ -1.09
LINC01880-201ENST00000446593 TNS4Q8IZW8 715 aa8.25□□□□□ -1.09
LINC01880-201ENST00000446593 L3MBTL2Q969R5 705 aa8.25□□□□□ -1.09
LINC01880-201ENST00000446593 KLRG1Q96E93 195 aa8.25□□□□□ -1.09
LINC01880-201ENST00000446593 COG3Q96JB2 828 aa8.25□□□□□ -1.09
LINC01880-201ENST00000446593 KIAA1210Q9ULL0 1709 aa8.25□□□□□ -1.09
LINC01880-201ENST00000446593 WNK3Q9BYP7 1800 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 QRICH2Q9H0J4 1663 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 SBNO2Q9Y2G9 1366 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 NSD3Q9BZ95 1437 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.24□□□□□ -1.09
LINC01880-201ENST00000446593 PHF14O94880 888 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 SSFA2P28290 1259 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 HOXC9P31274 260 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 PRELPP51888 382 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 TGFB2P61812 414 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 JMYQ8N9B5 988 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 RBM46Q8TBY0 533 aaKnown RBP8.24□□□□□ -1.09
LINC01880-201ENST00000446593 SLC12A5Q9H2X9 1139 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 BTAF1O14981 1849 aa8.24□□□□□ -1.09
LINC01880-201ENST00000446593 EDC4Q6P2E9 1401 aaKnown RBP8.23□□□□□ -1.09
LINC01880-201ENST00000446593 TATP17735 454 aaPredicted RBP8.23□□□□□ -1.09
LINC01880-201ENST00000446593 FSTL1Q12841 308 aa8.23□□□□□ -1.09
LINC01880-201ENST00000446593 ARHGAP27Q6ZUM4 889 aa8.23□□□□□ -1.09
LINC01880-201ENST00000446593 BCS1LQ9Y276 419 aa8.23□□□□□ -1.09
LINC01880-201ENST00000446593 PALLDQ8WX93 1383 aa8.22□□□□□ -1.09
LINC01880-201ENST00000446593 NBPF6Q5VWK0 638 aa8.22□□□□□ -1.09
LINC01880-201ENST00000446593 KIF12Q96FN5 646 aa8.22□□□□□ -1.09
LINC01880-201ENST00000446593 NBPF4Q96M43 638 aa8.22□□□□□ -1.09
LINC01880-201ENST00000446593 PUS7Q96PZ0 661 aaKnown RBP8.22□□□□□ -1.09
LINC01880-201ENST00000446593 PCGF6Q9BYE7 350 aa8.22□□□□□ -1.09
LINC01880-201ENST00000446593 NMRK2Q9NPI5 230 aa8.22□□□□□ -1.09
LINC01880-201ENST00000446593 MAP3K19Q56UN5 1328 aa8.22□□□□□ -1.09
LINC01880-201ENST00000446593 PCDH11XQ9BZA7 1347 aa8.22□□□□□ -1.09
LINC01880-201ENST00000446593 PCDH11YQ9BZA8 1340 aa8.22□□□□□ -1.09
LINC01880-201ENST00000446593 COL24A1Q17RW2 1714 aa8.21□□□□□ -1.09
LINC01880-201ENST00000446593 SNPHO15079 494 aa8.21□□□□□ -1.1
LINC01880-201ENST00000446593 MMP10P09238 476 aa8.21□□□□□ -1.1
LINC01880-201ENST00000446593 IER5LQ5T953 404 aa8.21□□□□□ -1.1
LINC01880-201ENST00000446593 NLGN1Q8N2Q7 840 aa8.21□□□□□ -1.1
LINC01880-201ENST00000446593 KDM2BQ8NHM5 1336 aa8.21□□□□□ -1.1
LINC01880-201ENST00000446593 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
LINC01880-201ENST00000446593 A0A0G2JLW4 131 aa8.2□□□□□ -1.1
LINC01880-201ENST00000446593 FCHSD2O94868 740 aa8.2□□□□□ -1.1
LINC01880-201ENST00000446593 TRPC6Q9Y210 931 aa8.2□□□□□ -1.1
LINC01880-201ENST00000446593 RGPD5Q99666 1765 aa8.2□□□□□ -1.1
LINC01880-201ENST00000446593 LOC102724428A0A0B4J2F2 783 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 GNPATO15228 680 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 SLC24A1O60721 1099 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 FBLN1P23142 703 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 SIK1P57059 783 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 TMF1P82094 1093 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 HTRA3P83110 453 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 TRAPPC3LQ5T215 181 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 C9orf131Q5VYM1 1079 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 SMIM5Q71RC9 77 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 AMIGO3Q86WK7 504 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 USHBP1Q8N6Y0 703 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 PIGBQ92521 554 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 MARVELD3Q96A59 401 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 CARD11Q9BXL7 1154 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 TSPYL2Q9H2G4 693 aaPredicted RBP8.19□□□□□ -1.1
LINC01880-201ENST00000446593 CCDC87Q9NVE4 849 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 A0A1W2PP64 1363 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 SMG6Q86US8 1419 aaKnown RBP8.19□□□□□ -1.1
LINC01880-201ENST00000446593 CD163L1Q9NR16 1453 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 MEGF6O75095 1541 aa8.19□□□□□ -1.1
LINC01880-201ENST00000446593 CYP27B1O15528 508 aa8.18□□□□□ -1.1
LINC01880-201ENST00000446593 ATP6V1AP38606 617 aa8.18□□□□□ -1.1
LINC01880-201ENST00000446593 NEUROD1Q13562 356 aa8.18□□□□□ -1.1
LINC01880-201ENST00000446593 RRS1Q15050 365 aaKnown RBP8.18□□□□□ -1.1
LINC01880-201ENST00000446593 LINC00116Q8NCU8 138 aa8.18□□□□□ -1.1
LINC01880-201ENST00000446593 SMC1BQ8NDV3 1235 aa8.18□□□□□ -1.1
LINC01880-201ENST00000446593 SPG7Q9UQ90 795 aa8.18□□□□□ -1.1
LINC01880-201ENST00000446593 RTCBQ9Y3I0 505 aaKnown RBP8.18□□□□□ -1.1
LINC01880-201ENST00000446593 PARP3Q9Y6F1 533 aa8.18□□□□□ -1.1
LINC01880-201ENST00000446593 RTL1A6NKG5 1358 aa8.18□□□□□ -1.1
LINC01880-201ENST00000446593 TTLL13PA6NNM8 815 aa8.17□□□□□ -1.1
LINC01880-201ENST00000446593 DPEP1P16444 411 aa8.17□□□□□ -1.1
LINC01880-201ENST00000446593 RRAGCQ9HB90 399 aa8.17□□□□□ -1.1
LINC01880-201ENST00000446593 TMOD3Q9NYL9 352 aa8.17□□□□□ -1.1
LINC01880-201ENST00000446593 PIM2Q9P1W9 311 aa8.17□□□□□ -1.1
LINC01880-201ENST00000446593 PLEKHG2Q9H7P9 1386 aa8.17□□□□□ -1.1
LINC01880-201ENST00000446593 RFC4P35249 363 aa8.16□□□□□ -1.1
LINC01880-201ENST00000446593 NKX1-1Q15270 411 aaPredicted RBP8.16□□□□□ -1.1
LINC01880-201ENST00000446593 DALRD3Q5D0E6 543 aaKnown RBP8.16□□□□□ -1.1
LINC01880-201ENST00000446593 KAT6BQ8WYB5 2073 aa8.16□□□□□ -1.1
LINC01880-201ENST00000446593 SIN3AQ96ST3 1273 aa8.16□□□□□ -1.1
LINC01880-201ENST00000446593 LY75O60449 1722 aa8.15□□□□□ -1.1
LINC01880-201ENST00000446593 PXDNLA1KZ92 1463 aa8.15□□□□□ -1.1
LINC01880-201ENST00000446593 HSP90AB2PQ58FF8 381 aa8.15□□□□□ -1.1
LINC01880-201ENST00000446593 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
LINC01880-201ENST00000446593 KRTAP3-2Q9BYR7 98 aa8.15□□□□□ -1.1
LINC01880-201ENST00000446593 RNF181Q9P0P0 153 aa8.15□□□□□ -1.1
LINC01880-201ENST00000446593 ASAP1Q9ULH1 1129 aa8.15□□□□□ -1.1
LINC01880-201ENST00000446593 INSRP06213 1382 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms