RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 LTV1Q96GA3 475 aaPredicted RBP17.32■□□□□ 0.36
ERCC3-203ENST00000445889 CDK12Q9NYV4 1490 aaPredicted RBP17.32■□□□□ 0.36
ERCC3-203ENST00000445889 PTPRCP08575 1304 aa17.31■□□□□ 0.36
ERCC3-203ENST00000445889 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
ERCC3-203ENST00000445889 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
ERCC3-203ENST00000445889 NOL7Q9UMY1 257 aaKnown RBP17.31■□□□□ 0.36
ERCC3-203ENST00000445889 LRRFIP2Q9Y608 721 aaKnown RBP17.31■□□□□ 0.36
ERCC3-203ENST00000445889 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
ERCC3-203ENST00000445889 FAM69CQ0P6D2 419 aa17.31■□□□□ 0.36
ERCC3-203ENST00000445889 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
ERCC3-203ENST00000445889 DLG5Q8TDM6 1919 aa17.3■□□□□ 0.36
ERCC3-203ENST00000445889 CHMLP26374 656 aa17.3■□□□□ 0.36
ERCC3-203ENST00000445889 PTMAP06454 111 aaKnown RBP17.3■□□□□ 0.36
ERCC3-203ENST00000445889 PDCL3Q9H2J4 239 aa17.3■□□□□ 0.36
ERCC3-203ENST00000445889 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
ERCC3-203ENST00000445889 PDLIM2Q96JY6 352 aa17.29■□□□□ 0.36
ERCC3-203ENST00000445889 CPA1P15085 419 aa17.29■□□□□ 0.36
ERCC3-203ENST00000445889 FLIIQ13045 1269 aa17.29■□□□□ 0.36
ERCC3-203ENST00000445889 STK31Q9BXU1 1019 aa17.29■□□□□ 0.36
ERCC3-203ENST00000445889 PREX1Q8TCU6 1659 aa17.28■□□□□ 0.36
ERCC3-203ENST00000445889 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
ERCC3-203ENST00000445889 SLC26A8Q96RN1 970 aa17.28■□□□□ 0.36
ERCC3-203ENST00000445889 BRD1O95696 1058 aa17.28■□□□□ 0.36
ERCC3-203ENST00000445889 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
ERCC3-203ENST00000445889 PLCB2Q00722 1185 aa17.27■□□□□ 0.36
ERCC3-203ENST00000445889 CLTCQ00610 1675 aaKnown RBP17.27■□□□□ 0.36
ERCC3-203ENST00000445889 NEO1Q92859 1461 aa17.27■□□□□ 0.36
ERCC3-203ENST00000445889 UQCRHLA0A096LP55 91 aa17.27■□□□□ 0.36
ERCC3-203ENST00000445889 UQCRHP07919 91 aa17.27■□□□□ 0.36
ERCC3-203ENST00000445889 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.36
ERCC3-203ENST00000445889 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
ERCC3-203ENST00000445889 USP48Q86UV5 1035 aa17.27■□□□□ 0.36
ERCC3-203ENST00000445889 C17orf53Q8N3J3 647 aaPredicted RBP17.27■□□□□ 0.36
ERCC3-203ENST00000445889 ZKSCAN5Q9Y2L8 839 aa17.27■□□□□ 0.35
ERCC3-203ENST00000445889 AMPHP49418 695 aa17.26■□□□□ 0.35
ERCC3-203ENST00000445889 TSC1Q92574 1164 aa17.26■□□□□ 0.35
ERCC3-203ENST00000445889 EYA1Q99502 592 aa17.26■□□□□ 0.35
ERCC3-203ENST00000445889 OSBPL3Q9H4L5 887 aa17.26■□□□□ 0.35
ERCC3-203ENST00000445889 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
ERCC3-203ENST00000445889 EIF2S2P20042 333 aaKnown RBP17.26■□□□□ 0.35
ERCC3-203ENST00000445889 CRB1P82279 1406 aa17.25■□□□□ 0.35
ERCC3-203ENST00000445889 MCCP23508 829 aa17.25■□□□□ 0.35
ERCC3-203ENST00000445889 ZNF500O60304 480 aaPredicted RBP17.24■□□□□ 0.35
ERCC3-203ENST00000445889 SURF6O75683 361 aaKnown RBP17.24■□□□□ 0.35
ERCC3-203ENST00000445889 USHBP1Q8N6Y0 703 aa17.24■□□□□ 0.35
ERCC3-203ENST00000445889 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
ERCC3-203ENST00000445889 ANXA1P04083 346 aa17.24■□□□□ 0.35
ERCC3-203ENST00000445889 HS1BP3Q53T59 392 aa17.24■□□□□ 0.35
ERCC3-203ENST00000445889 ESF1Q9H501 851 aaKnown RBP17.24■□□□□ 0.35
ERCC3-203ENST00000445889 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
ERCC3-203ENST00000445889 ROBO2Q9HCK4 1378 aa17.24■□□□□ 0.35
ERCC3-203ENST00000445889 ATP8B2P98198 1209 aa17.24■□□□□ 0.35
ERCC3-203ENST00000445889 TSPY26PQ9H489 355 aa17.24■□□□□ 0.35
ERCC3-203ENST00000445889 SPG7Q9UQ90 795 aa17.24■□□□□ 0.35
ERCC3-203ENST00000445889 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
ERCC3-203ENST00000445889 USP44Q9H0E7 712 aa17.23■□□□□ 0.35
ERCC3-203ENST00000445889 USP25Q9UHP3 1055 aa17.23■□□□□ 0.35
ERCC3-203ENST00000445889 REREQ9P2R6 1566 aa17.23■□□□□ 0.35
ERCC3-203ENST00000445889 SALL3Q9BXA9 1300 aa17.23■□□□□ 0.35
ERCC3-203ENST00000445889 DNTTIP2Q5QJE6 756 aaKnown RBP17.23■□□□□ 0.35
ERCC3-203ENST00000445889 CUL4AQ13619 759 aa17.22■□□□□ 0.35
ERCC3-203ENST00000445889 CWC27Q6UX04 472 aaKnown RBP17.22■□□□□ 0.35
ERCC3-203ENST00000445889 RASEFQ8IZ41 740 aa17.22■□□□□ 0.35
ERCC3-203ENST00000445889 MBD3O95983 291 aa17.21■□□□□ 0.35
ERCC3-203ENST00000445889 SRCIN1Q9C0H9 1055 aa17.21■□□□□ 0.35
ERCC3-203ENST00000445889 CCDC39Q9UFE4 941 aa17.21■□□□□ 0.35
ERCC3-203ENST00000445889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.21■□□□□ 0.356e-7■■■■□ 22.3
ERCC3-203ENST00000445889 TTC12Q9H892 705 aaPredicted RBP17.21■□□□□ 0.35
ERCC3-203ENST00000445889 FIBPO43427 364 aa17.2■□□□□ 0.34
ERCC3-203ENST00000445889 UBTFL1P0CB47 393 aaPredicted RBP17.2■□□□□ 0.34
ERCC3-203ENST00000445889 PPP1R42Q7Z4L9 355 aa17.2■□□□□ 0.34
ERCC3-203ENST00000445889 NGDNQ8NEJ9 315 aaKnown RBP17.2■□□□□ 0.34
ERCC3-203ENST00000445889 CHMP3Q9Y3E7 222 aa17.2■□□□□ 0.34
ERCC3-203ENST00000445889 GNAI3P08754 354 aa17.2■□□□□ 0.34
ERCC3-203ENST00000445889 HCLS1P14317 486 aaPredicted RBP17.2■□□□□ 0.34
ERCC3-203ENST00000445889 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
ERCC3-203ENST00000445889 IL17REQ8NFR9 667 aa17.2■□□□□ 0.34
ERCC3-203ENST00000445889 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
ERCC3-203ENST00000445889 C14orf37Q86TY3 774 aa17.19■□□□□ 0.34
ERCC3-203ENST00000445889 DLC1Q96QB1 1528 aa17.18■□□□□ 0.34
ERCC3-203ENST00000445889 SRGAP3O43295 1099 aa17.18■□□□□ 0.34
ERCC3-203ENST00000445889 MCM2P49736 904 aa17.18■□□□□ 0.34
ERCC3-203ENST00000445889 LARGE1O95461 756 aa17.17■□□□□ 0.34
ERCC3-203ENST00000445889 AK2P54819 239 aa17.17■□□□□ 0.34
ERCC3-203ENST00000445889 NLRP6P59044 892 aa17.17■□□□□ 0.34
ERCC3-203ENST00000445889 LTKP29376 864 aa17.17■□□□□ 0.34
ERCC3-203ENST00000445889 GIMAP6Q6P9H5 292 aa17.17■□□□□ 0.34
ERCC3-203ENST00000445889 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
ERCC3-203ENST00000445889 COL9A3Q14050 684 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-203ENST00000445889 SNX14Q9Y5W7 946 aa17.16■□□□□ 0.34
ERCC3-203ENST00000445889 SOS1Q07889 1333 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-203ENST00000445889 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
ERCC3-203ENST00000445889 HSPA4P34932 840 aa17.16■□□□□ 0.34
ERCC3-203ENST00000445889 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-203ENST00000445889 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
ERCC3-203ENST00000445889 GNAT3A8MTJ3 354 aa17.15■□□□□ 0.34
ERCC3-203ENST00000445889 SYT1P21579 422 aa17.15■□□□□ 0.34
ERCC3-203ENST00000445889 TERF1P54274 439 aa17.15■□□□□ 0.34
ERCC3-203ENST00000445889 RUFY3Q7L099 469 aa17.15■□□□□ 0.34
ERCC3-203ENST00000445889 RHPN1Q8TCX5 695 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms