RNA–Protein interactions for RNA: ENST00000445563.2

CHMP1AP1-201, Transcript of charged multivesicular body protein 1A pseudogene 1, humanhuman

BASIC

Gene CHMP1AP1, Length 662 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AP1-201ENST00000445563 PAPPAQ13219 1627 aa19.73■□□□□ 0.75
CHMP1AP1-201ENST00000445563 KCNQ4P56696 695 aa19.72■□□□□ 0.75
CHMP1AP1-201ENST00000445563 NBPF14Q5TI25 921 aa19.72■□□□□ 0.75
CHMP1AP1-201ENST00000445563 CCNL1Q9UK58 526 aaPredicted RBP19.72■□□□□ 0.75
CHMP1AP1-201ENST00000445563 KAT6BQ8WYB5 2073 aa19.72■□□□□ 0.75
CHMP1AP1-201ENST00000445563 MAPK8IP3Q9UPT6 1336 aa19.72■□□□□ 0.75
CHMP1AP1-201ENST00000445563 LOC102724428A0A0B4J2F2 783 aa19.71■□□□□ 0.75
CHMP1AP1-201ENST00000445563 SIK1P57059 783 aa19.71■□□□□ 0.75
CHMP1AP1-201ENST00000445563 CCDC146Q8IYE0 955 aa19.71■□□□□ 0.75
CHMP1AP1-201ENST00000445563 SLC4A9Q96Q91 983 aa19.71■□□□□ 0.75
CHMP1AP1-201ENST00000445563 MRS2Q9HD23 443 aa19.71■□□□□ 0.75
CHMP1AP1-201ENST00000445563 TMPOP42166 694 aaKnown RBP19.7■□□□□ 0.74
CHMP1AP1-201ENST00000445563 R3HDM1Q15032 1099 aaKnown RBP19.7■□□□□ 0.74
CHMP1AP1-201ENST00000445563 MCM10Q7L590 875 aa19.7■□□□□ 0.74
CHMP1AP1-201ENST00000445563 AKT1S1Q96B36 256 aa19.7■□□□□ 0.74
CHMP1AP1-201ENST00000445563 DCTN1Q14203 1278 aa19.69■□□□□ 0.74
CHMP1AP1-201ENST00000445563 SLC15A2Q16348 729 aa19.69■□□□□ 0.74
CHMP1AP1-201ENST00000445563 RTF1Q92541 710 aaKnown RBP19.69■□□□□ 0.74
CHMP1AP1-201ENST00000445563 PSDA5PKW4 1024 aaPredicted RBP19.68■□□□□ 0.74
CHMP1AP1-201ENST00000445563 TEFQ10587 303 aa19.68■□□□□ 0.74
CHMP1AP1-201ENST00000445563 ZNF827Q17R98 1081 aa19.68■□□□□ 0.74
CHMP1AP1-201ENST00000445563 RIPK4P57078 832 aa19.67■□□□□ 0.74
CHMP1AP1-201ENST00000445563 SLC39A6Q13433 755 aa19.67■□□□□ 0.74
CHMP1AP1-201ENST00000445563 ITPK1Q13572 414 aa19.67■□□□□ 0.74
CHMP1AP1-201ENST00000445563 STK32BQ9NY57 414 aa19.67■□□□□ 0.74
CHMP1AP1-201ENST00000445563 HMGB2P26583 209 aaKnown RBP19.65■□□□□ 0.74
CHMP1AP1-201ENST00000445563 ATP6V1AP38606 617 aa19.65■□□□□ 0.74
CHMP1AP1-201ENST00000445563 SIPA1L3O60292 1781 aaPredicted RBP19.65■□□□□ 0.74
CHMP1AP1-201ENST00000445563 PTCD1O75127 700 aaKnown RBP19.64■□□□□ 0.73
CHMP1AP1-201ENST00000445563 LINC00116Q8NCU8 138 aa19.64■□□□□ 0.73
CHMP1AP1-201ENST00000445563 RBM42Q9BTD8 480 aaKnown RBP19.64■□□□□ 0.73
CHMP1AP1-201ENST00000445563 TRIM35Q9UPQ4 493 aa19.64■□□□□ 0.73
CHMP1AP1-201ENST00000445563 RRP7AQ9Y3A4 280 aaKnown RBP19.64■□□□□ 0.73
CHMP1AP1-201ENST00000445563 ZNF831Q5JPB2 1677 aa19.64■□□□□ 0.73
CHMP1AP1-201ENST00000445563 VIRMAQ69YN4 1812 aaKnown RBP19.63■□□□□ 0.73
CHMP1AP1-201ENST00000445563 KCPQ6ZWJ8 1503 aa19.63■□□□□ 0.73
CHMP1AP1-201ENST00000445563 TAF7Q15545 349 aaPredicted RBP19.63■□□□□ 0.73
CHMP1AP1-201ENST00000445563 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
CHMP1AP1-201ENST00000445563 ZNF790Q6PG37 636 aa19.63■□□□□ 0.73
CHMP1AP1-201ENST00000445563 THUMPD2Q9BTF0 503 aaKnown RBP19.63■□□□□ 0.73
CHMP1AP1-201ENST00000445563 BTBD11A6QL63 1104 aa19.62■□□□□ 0.73
CHMP1AP1-201ENST00000445563 APAF1O14727 1248 aa19.62■□□□□ 0.73
CHMP1AP1-201ENST00000445563 KCNQ3O43525 872 aa19.62■□□□□ 0.73
CHMP1AP1-201ENST00000445563 DLG5Q8TDM6 1919 aa19.62■□□□□ 0.73
CHMP1AP1-201ENST00000445563 LMOD3Q0VAK6 560 aa19.61■□□□□ 0.73
CHMP1AP1-201ENST00000445563 VSIG10Q8N0Z9 540 aa19.61■□□□□ 0.73
CHMP1AP1-201ENST00000445563 PDGFDQ9GZP0 370 aaPredicted RBP19.61■□□□□ 0.73
CHMP1AP1-201ENST00000445563 C5P01031 1676 aa19.6■□□□□ 0.73
CHMP1AP1-201ENST00000445563 CCER2I3L3R5 266 aa19.6■□□□□ 0.73
CHMP1AP1-201ENST00000445563 ZNF496Q96IT1 587 aaPredicted RBP19.6■□□□□ 0.73
CHMP1AP1-201ENST00000445563 CICQ96RK0 1608 aaPredicted RBP19.59■□□□□ 0.73
CHMP1AP1-201ENST00000445563 NEUROD2Q15784 382 aa19.59■□□□□ 0.73
CHMP1AP1-201ENST00000445563 RC3H1Q5TC82 1133 aaKnown RBP19.59■□□□□ 0.73
CHMP1AP1-201ENST00000445563 TAF1LQ8IZX4 1826 aa19.59■□□□□ 0.73
CHMP1AP1-201ENST00000445563 PNPLA7Q6ZV29 1317 aa19.58■□□□□ 0.73
CHMP1AP1-201ENST00000445563 UBR2Q8IWV8 1755 aa19.58■□□□□ 0.73
CHMP1AP1-201ENST00000445563 AMIGO3Q86WK7 504 aa19.58■□□□□ 0.72
CHMP1AP1-201ENST00000445563 DNAJC10Q8IXB1 793 aa19.58■□□□□ 0.72
CHMP1AP1-201ENST00000445563 TTC5Q8N0Z6 440 aa19.58■□□□□ 0.72
CHMP1AP1-201ENST00000445563 TFCP2L1Q9NZI6 479 aa19.58■□□□□ 0.72
CHMP1AP1-201ENST00000445563 C4BP0C0L5 1744 aa19.58■□□□□ 0.72
CHMP1AP1-201ENST00000445563 CNTNAP4Q9C0A0 1308 aa19.57■□□□□ 0.72
CHMP1AP1-201ENST00000445563 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
CHMP1AP1-201ENST00000445563 MIS18AQ9NYP9 233 aa19.57■□□□□ 0.72
CHMP1AP1-201ENST00000445563 HEG1Q9ULI3 1381 aa19.57■□□□□ 0.72
CHMP1AP1-201ENST00000445563 FMNL2Q96PY5 1086 aa19.56■□□□□ 0.72
CHMP1AP1-201ENST00000445563 BABAM1Q9NWV8 329 aa19.56■□□□□ 0.72
CHMP1AP1-201ENST00000445563 CASZ1Q86V15 1759 aa19.56■□□□□ 0.72
CHMP1AP1-201ENST00000445563 TJP1Q07157 1748 aa19.56■□□□□ 0.72
CHMP1AP1-201ENST00000445563 CYP19A1P11511 503 aaPredicted RBP19.55■□□□□ 0.72
CHMP1AP1-201ENST00000445563 COL23A1Q86Y22 540 aaPredicted RBP19.55■□□□□ 0.72
CHMP1AP1-201ENST00000445563 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
CHMP1AP1-201ENST00000445563 AK7Q96M32 723 aa19.55■□□□□ 0.72
CHMP1AP1-201ENST00000445563 COL5A3P25940 1745 aaPredicted RBP19.54■□□□□ 0.72
CHMP1AP1-201ENST00000445563 QSER1Q2KHR3 1735 aa19.54■□□□□ 0.72
CHMP1AP1-201ENST00000445563 INTS5Q6P9B9 1019 aaKnown RBP19.54■□□□□ 0.72
CHMP1AP1-201ENST00000445563 MIER1Q8N108 512 aa19.54■□□□□ 0.72
CHMP1AP1-201ENST00000445563 CHL1O00533 1208 aa19.53■□□□□ 0.72
CHMP1AP1-201ENST00000445563 CRKLP46109 303 aaKnown RBP19.53■□□□□ 0.72
CHMP1AP1-201ENST00000445563 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
CHMP1AP1-201ENST00000445563 FLAD1Q8NFF5 587 aa19.53■□□□□ 0.72
CHMP1AP1-201ENST00000445563 TEX13AQ9BXU3 409 aaPredicted RBP19.53■□□□□ 0.72
CHMP1AP1-201ENST00000445563 RPS6KA4O75676 772 aa19.52■□□□□ 0.72
CHMP1AP1-201ENST00000445563 SSFA2P28290 1259 aa19.52■□□□□ 0.72
CHMP1AP1-201ENST00000445563 EIF4A1P60842 406 aaKnown RBP19.52■□□□□ 0.72
CHMP1AP1-201ENST00000445563 SMIM5Q71RC9 77 aa19.52■□□□□ 0.72
CHMP1AP1-201ENST00000445563 SLC16A10Q8TF71 515 aa19.52■□□□□ 0.72
CHMP1AP1-201ENST00000445563 TUBGCP6Q96RT7 1819 aa19.51■□□□□ 0.71
CHMP1AP1-201ENST00000445563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.51■□□□□ 0.71
CHMP1AP1-201ENST00000445563 GNPATO15228 680 aa19.51■□□□□ 0.71
CHMP1AP1-201ENST00000445563 PRAMEF22A3QJZ6 481 aa19.5■□□□□ 0.71
CHMP1AP1-201ENST00000445563 SNRPA1P09661 255 aaKnown RBP19.5■□□□□ 0.71
CHMP1AP1-201ENST00000445563 ZNF853P0CG23 659 aa19.5■□□□□ 0.71
CHMP1AP1-201ENST00000445563 CCDC87Q9NVE4 849 aa19.5■□□□□ 0.71
CHMP1AP1-201ENST00000445563 TSPYL4Q9UJ04 414 aa19.5■□□□□ 0.71
CHMP1AP1-201ENST00000445563 RTCBQ9Y3I0 505 aaKnown RBP19.5■□□□□ 0.71
CHMP1AP1-201ENST00000445563 USP16Q9Y5T5 823 aa19.5■□□□□ 0.71
CHMP1AP1-201ENST00000445563 KDM3BQ7LBC6 1761 aa19.49■□□□□ 0.71
CHMP1AP1-201ENST00000445563 ZBTB7AO95365 584 aa19.49■□□□□ 0.71
CHMP1AP1-201ENST00000445563 STARD3NLO95772 234 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms