RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 RASEFQ8IZ41 740 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 CHPFQ8IZ52 775 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 PROCA1Q8NCQ7 364 aaPredicted RBP3.42□□□□□ -1.86
UBBP3-201ENST00000445497 RSPH1Q8WYR4 309 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 CCDC47Q96A33 483 aaKnown RBP3.42□□□□□ -1.86
UBBP3-201ENST00000445497 MPHOSPH6Q99547 160 aaKnown RBP3.42□□□□□ -1.86
UBBP3-201ENST00000445497 TSPY26PQ9H489 355 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 POLG2Q9UHN1 485 aa3.42□□□□□ -1.86
UBBP3-201ENST00000445497 DMGDHQ9UI17 866 aaKnown RBP3.42□□□□□ -1.86
UBBP3-201ENST00000445497 ISY1Q9ULR0 285 aaKnown RBP3.42□□□□□ -1.86
UBBP3-201ENST00000445497 MRPL42Q9Y6G3 142 aaKnown RBP3.42□□□□□ -1.86
UBBP3-201ENST00000445497 NUTM2FA1L443 756 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 SMAPO00193 183 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 TBX3O15119 743 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 RPN1P04843 607 aaKnown RBP3.41□□□□□ -1.86
UBBP3-201ENST00000445497 PYGBP11216 843 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 MNX1P50219 401 aaPredicted RBP3.41□□□□□ -1.86
UBBP3-201ENST00000445497 CACNB1Q02641 598 aaPredicted RBP3.41□□□□□ -1.86
UBBP3-201ENST00000445497 FAM160A1Q05DH4 1040 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 TMEM95Q3KNT9 176 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 PLEKHG4Q58EX7 1191 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 ARSHQ5FYA8 562 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 PPP2R2DQ66LE6 453 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 PPP4R4Q6NUP7 873 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 HDGFL2Q7Z4V5 671 aaPredicted RBP3.41□□□□□ -1.86
UBBP3-201ENST00000445497 VPS37DQ86XT2 251 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 HSCBQ8IWL3 235 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 NDUFAF2Q8N183 169 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 CHCHD4Q8N4Q1 142 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 STAG1Q8WVM7 1258 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 RNF34Q969K3 372 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 ASB16Q96NS5 453 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 SEZ6LQ9BYH1 1024 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 GPCPD1Q9NPB8 672 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 POLR3EQ9NVU0 708 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 EGFL7Q9UHF1 273 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 TTF2Q9UNY4 1162 aaKnown RBP3.41□□□□□ -1.86
UBBP3-201ENST00000445497 THRAP3Q9Y2W1 955 aaKnown RBP3.41□□□□□ -1.86
UBBP3-201ENST00000445497 RABGAP1Q9Y3P9 1069 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 NDUFB9Q9Y6M9 179 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 NCKAP5LQ9HCH0 1330 aa3.41□□□□□ -1.86
UBBP3-201ENST00000445497 TMEM238LA0A1B0GVL6 79 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 NR1I2O75469 434 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 RNASEH2AO75792 299 aaKnown RBP3.4□□□□□ -1.87
UBBP3-201ENST00000445497 MTA2O94776 668 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 TPM2P07951 284 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 KCNA2P16389 499 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 DNAJA1P31689 397 aaKnown RBP3.4□□□□□ -1.87
UBBP3-201ENST00000445497 ZNF76P36508 570 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 TERF1P54274 439 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 NLRP6P59044 892 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 HMGN5P82970 282 aaKnown RBP3.4□□□□□ -1.87
UBBP3-201ENST00000445497 TMED1Q13445 227 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 PDIA6Q15084 440 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 ALFQ53S48 1182 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 OTUD6AQ7L8S5 288 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 POTEDQ86YR6 584 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 TTC30BQ8N4P2 665 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 OGFOD1Q8N543 542 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 ZNF513Q8N8E2 541 aaPredicted RBP3.4□□□□□ -1.87
UBBP3-201ENST00000445497 ADAMTS19Q8TE59 1207 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 FBXO41Q8TF61 875 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 FRS2Q8WU20 508 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 RPGRQ92834 1020 aaKnown RBP3.4□□□□□ -1.87
UBBP3-201ENST00000445497 ZNF594Q96JF6 807 aaPredicted RBP3.4□□□□□ -1.87
UBBP3-201ENST00000445497 CDHR1Q96JP9 859 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 NEUROD6Q96NK8 337 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 BEGAINQ9BUH8 593 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 MFRPQ9BY79 579 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 MUC3BQ9H195 1237 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 CXorf56Q9H5V9 222 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 SUDS3Q9H7L9 328 aaPredicted RBP3.4□□□□□ -1.87
UBBP3-201ENST00000445497 MRS2Q9HD23 443 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 TFIP11Q9UBB9 837 aaKnown RBP3.4□□□□□ -1.87
UBBP3-201ENST00000445497 PARP2Q9UGN5 583 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 KLF15Q9UIH9 416 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 ZNF652Q9Y2D9 606 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 MAFBQ9Y5Q3 323 aaPredicted RBP3.4□□□□□ -1.87
UBBP3-201ENST00000445497 EID1Q9Y6B2 187 aa3.4□□□□□ -1.87
UBBP3-201ENST00000445497 A0A1W2PRQ8 180 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 A6NJY4 79 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 KIF1CO43896 1103 aaKnown RBP3.39□□□□□ -1.87
UBBP3-201ENST00000445497 MYL3P08590 195 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 FAM163BP0C2L3 166 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 CLK1P49759 484 aaKnown RBP3.39□□□□□ -1.87
UBBP3-201ENST00000445497 EXOSC10Q01780 885 aaKnown RBP3.39□□□□□ -1.87
UBBP3-201ENST00000445497 SLC20A2Q08357 652 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 TAF11Q15544 211 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 ALDH1L2Q3SY69 923 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 CCDC158Q5M9N0 1113 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 TMEM164Q5U3C3 297 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 MYSM1Q5VVJ2 828 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 C9orf131Q5VYM1 1079 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 PHLDB3Q6NSJ2 640 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 PPP1R18Q6NYC8 613 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 METTL16Q86W50 562 aaKnown RBP3.39□□□□□ -1.87
UBBP3-201ENST00000445497 SMAP1Q8IYB5 467 aaPredicted RBP3.39□□□□□ -1.87
UBBP3-201ENST00000445497 ERP27Q96DN0 273 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 IWS1Q96ST2 819 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 ARPC5LQ9BPX5 153 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms