RNA–Protein interactions for RNA: ENST00000445368.1

PUDPP3-201, Transcript of pseudouridine 5'-phosphatase pseudogene 3, humanhuman

BASIC

Gene PUDPP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP3-201ENST00000445368 SPON1Q9HCB6 807 aa19.48■□□□□ 0.71
PUDPP3-201ENST00000445368 ATG3Q9NT62 314 aa19.48■□□□□ 0.71
PUDPP3-201ENST00000445368 ASAP1Q9ULH1 1129 aa19.48■□□□□ 0.71
PUDPP3-201ENST00000445368 RRP7AQ9Y3A4 280 aaKnown RBP19.48■□□□□ 0.71
PUDPP3-201ENST00000445368 SBF2Q86WG5 1849 aa19.48■□□□□ 0.71
PUDPP3-201ENST00000445368 RGPD3A6NKT7 1758 aaPredicted RBP19.47■□□□□ 0.71
PUDPP3-201ENST00000445368 RGPD4Q7Z3J3 1758 aa19.47■□□□□ 0.71
PUDPP3-201ENST00000445368 LMOD3Q0VAK6 560 aa19.47■□□□□ 0.71
PUDPP3-201ENST00000445368 NEUROD2Q15784 382 aa19.47■□□□□ 0.71
PUDPP3-201ENST00000445368 RREB1Q92766 1687 aa19.46■□□□□ 0.71
PUDPP3-201ENST00000445368 SENP3-EIF4A1A0A087X0R7 540 aa19.46■□□□□ 0.71
PUDPP3-201ENST00000445368 LOC102724428A0A0B4J2F2 783 aa19.46■□□□□ 0.71
PUDPP3-201ENST00000445368 SIK1P57059 783 aa19.46■□□□□ 0.71
PUDPP3-201ENST00000445368 RNMTO43148 476 aaKnown RBP19.45■□□□□ 0.7
PUDPP3-201ENST00000445368 NFATC2IPQ8NCF5 419 aa19.45■□□□□ 0.7
PUDPP3-201ENST00000445368 PDGFDQ9GZP0 370 aaPredicted RBP19.45■□□□□ 0.7
PUDPP3-201ENST00000445368 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
PUDPP3-201ENST00000445368 MAP3K5Q99683 1374 aa19.44■□□□□ 0.7
PUDPP3-201ENST00000445368 KDM6AO15550 1401 aaPredicted RBP19.44■□□□□ 0.7
PUDPP3-201ENST00000445368 HTATSF1O43719 755 aaKnown RBP19.44■□□□□ 0.7
PUDPP3-201ENST00000445368 SLC16A10Q8TF71 515 aa19.44■□□□□ 0.7
PUDPP3-201ENST00000445368 LGR6Q9HBX8 967 aa19.44■□□□□ 0.7
PUDPP3-201ENST00000445368 TFCP2L1Q9NZI6 479 aa19.44■□□□□ 0.7
PUDPP3-201ENST00000445368 SHANK3Q9BYB0 1731 aa19.44■□□□□ 0.7
PUDPP3-201ENST00000445368 DLG5Q8TDM6 1919 aa19.43■□□□□ 0.7
PUDPP3-201ENST00000445368 GNAT3A8MTJ3 354 aa19.43■□□□□ 0.7
PUDPP3-201ENST00000445368 WWC1Q8IX03 1113 aa19.43■□□□□ 0.7
PUDPP3-201ENST00000445368 RTF1Q92541 710 aaKnown RBP19.43■□□□□ 0.7
PUDPP3-201ENST00000445368 SLC52A2Q9HAB3 445 aa19.43■□□□□ 0.7
PUDPP3-201ENST00000445368 MTFR1LQ9H019 292 aa19.42■□□□□ 0.7
PUDPP3-201ENST00000445368 TRIM35Q9UPQ4 493 aa19.42■□□□□ 0.7
PUDPP3-201ENST00000445368 ZNF521Q96K83 1311 aa19.42■□□□□ 0.7
PUDPP3-201ENST00000445368 NUP188Q5SRE5 1749 aa19.42■□□□□ 0.7
PUDPP3-201ENST00000445368 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
PUDPP3-201ENST00000445368 ATP6V1AP38606 617 aa19.4■□□□□ 0.7
PUDPP3-201ENST00000445368 CALD1Q05682 793 aaKnown RBP19.4■□□□□ 0.7
PUDPP3-201ENST00000445368 WDR63Q8IWG1 891 aa19.4■□□□□ 0.7
PUDPP3-201ENST00000445368 FLAD1Q8NFF5 587 aa19.4■□□□□ 0.7
PUDPP3-201ENST00000445368 PNPLA7Q6ZV29 1317 aa19.4■□□□□ 0.7
PUDPP3-201ENST00000445368 BTAF1O14981 1849 aa19.39■□□□□ 0.69
PUDPP3-201ENST00000445368 ITPK1Q13572 414 aa19.38■□□□□ 0.69
PUDPP3-201ENST00000445368 IL17REQ8NFR9 667 aa19.38■□□□□ 0.69
PUDPP3-201ENST00000445368 SLC4A9Q96Q91 983 aa19.38■□□□□ 0.69
PUDPP3-201ENST00000445368 ATF5Q9Y2D1 282 aaPredicted RBP19.38■□□□□ 0.69
PUDPP3-201ENST00000445368 PTGER2P43116 358 aa19.37■□□□□ 0.69
PUDPP3-201ENST00000445368 GOLGA2Q08379 1002 aa19.37■□□□□ 0.69
PUDPP3-201ENST00000445368 LINC00116Q8NCU8 138 aa19.37■□□□□ 0.69
PUDPP3-201ENST00000445368 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
PUDPP3-201ENST00000445368 DOT1LQ8TEK3 1739 aa19.37■□□□□ 0.69
PUDPP3-201ENST00000445368 IL16Q14005 1332 aa19.36■□□□□ 0.69
PUDPP3-201ENST00000445368 RC3H1Q5TC82 1133 aaKnown RBP19.36■□□□□ 0.69
PUDPP3-201ENST00000445368 MCM10Q7L590 875 aa19.36■□□□□ 0.69
PUDPP3-201ENST00000445368 COL23A1Q86Y22 540 aaPredicted RBP19.36■□□□□ 0.69
PUDPP3-201ENST00000445368 AK7Q96M32 723 aa19.36■□□□□ 0.69
PUDPP3-201ENST00000445368 SGIP1Q9BQI5 828 aa19.36■□□□□ 0.69
PUDPP3-201ENST00000445368 ADAMTS7Q9UKP4 1686 aa19.36■□□□□ 0.69
PUDPP3-201ENST00000445368 CEMIPQ8WUJ3 1361 aa19.35■□□□□ 0.69
PUDPP3-201ENST00000445368 DCTN1Q14203 1278 aa19.35■□□□□ 0.69
PUDPP3-201ENST00000445368 PAPPAQ13219 1627 aa19.35■□□□□ 0.69
PUDPP3-201ENST00000445368 PTCD1O75127 700 aaKnown RBP19.34■□□□□ 0.69
PUDPP3-201ENST00000445368 PPP1R1BQ9UD71 204 aaPredicted RBP19.34■□□□□ 0.69
PUDPP3-201ENST00000445368 SSFA2P28290 1259 aa19.33■□□□□ 0.68
PUDPP3-201ENST00000445368 TEFQ10587 303 aa19.33■□□□□ 0.68
PUDPP3-201ENST00000445368 THUMPD2Q9BTF0 503 aaKnown RBP19.33■□□□□ 0.68
PUDPP3-201ENST00000445368 SCN11AQ9UI33 1791 aa19.32■□□□□ 0.68
PUDPP3-201ENST00000445368 E9PSI1 815 aa19.32■□□□□ 0.68
PUDPP3-201ENST00000445368 LRP5O75197 1615 aa19.32■□□□□ 0.68
PUDPP3-201ENST00000445368 TOGARAM1Q9Y4F4 1720 aa19.31■□□□□ 0.68
PUDPP3-201ENST00000445368 MSH5O43196 834 aa19.31■□□□□ 0.68
PUDPP3-201ENST00000445368 SLC39A6Q13433 755 aa19.31■□□□□ 0.68
PUDPP3-201ENST00000445368 VSIG10Q8N0Z9 540 aa19.31■□□□□ 0.68
PUDPP3-201ENST00000445368 MYH16Q9H6N6 1097 aa19.31■□□□□ 0.68
PUDPP3-201ENST00000445368 IFT57Q9NWB7 429 aa19.31■□□□□ 0.68
PUDPP3-201ENST00000445368 VIRMAQ69YN4 1812 aaKnown RBP19.3■□□□□ 0.68
PUDPP3-201ENST00000445368 CNTNAP4Q9C0A0 1308 aa19.3■□□□□ 0.68
PUDPP3-201ENST00000445368 SRCAPQ6ZRS2 3230 aa19.3■□□□□ 0.68
PUDPP3-201ENST00000445368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.3■□□□□ 0.68
PUDPP3-201ENST00000445368 GNAI1P63096 354 aa19.3■□□□□ 0.68
PUDPP3-201ENST00000445368 SLFN5Q08AF3 891 aa19.3■□□□□ 0.68
PUDPP3-201ENST00000445368 MRC1P22897 1456 aa19.29■□□□□ 0.68
PUDPP3-201ENST00000445368 GNPATO15228 680 aa19.29■□□□□ 0.68
PUDPP3-201ENST00000445368 RPS6KA4O75676 772 aa19.29■□□□□ 0.68
PUDPP3-201ENST00000445368 POLD1P28340 1107 aa19.29■□□□□ 0.68
PUDPP3-201ENST00000445368 AMIGO3Q86WK7 504 aa19.29■□□□□ 0.68
PUDPP3-201ENST00000445368 CDCA7LQ96GN5 454 aa19.29■□□□□ 0.68
PUDPP3-201ENST00000445368 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
PUDPP3-201ENST00000445368 ARXQ96QS3 562 aa19.29■□□□□ 0.68
PUDPP3-201ENST00000445368 RTCBQ9Y3I0 505 aaKnown RBP19.29■□□□□ 0.68
PUDPP3-201ENST00000445368 ADRA2BP18089 450 aa19.28■□□□□ 0.68
PUDPP3-201ENST00000445368 TAF7Q15545 349 aaPredicted RBP19.28■□□□□ 0.68
PUDPP3-201ENST00000445368 ZNF790Q6PG37 636 aa19.28■□□□□ 0.68
PUDPP3-201ENST00000445368 BABAM1Q9NWV8 329 aa19.28■□□□□ 0.68
PUDPP3-201ENST00000445368 LY75O60449 1722 aa19.28■□□□□ 0.68
PUDPP3-201ENST00000445368 ZNF853P0CG23 659 aa19.27■□□□□ 0.68
PUDPP3-201ENST00000445368 TRAPPC3LQ5T215 181 aa19.27■□□□□ 0.68
PUDPP3-201ENST00000445368 TRMT2AQ8IZ69 625 aaKnown RBP19.27■□□□□ 0.68
PUDPP3-201ENST00000445368 TTC5Q8N0Z6 440 aa19.27■□□□□ 0.68
PUDPP3-201ENST00000445368 SPINK5Q9NQ38 1064 aaPredicted RBP19.27■□□□□ 0.68
PUDPP3-201ENST00000445368 LAS1LQ9Y4W2 734 aaKnown RBP19.27■□□□□ 0.68
PUDPP3-201ENST00000445368 CHL1O00533 1208 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms