RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ATG3Q9NT62 314 aa23.15■■□□□ 1.3
SMARCAL1-209ENST00000444508 MRC1P22897 1456 aa23.14■■□□□ 1.29
SMARCAL1-209ENST00000444508 SLC15A2Q16348 729 aa23.14■■□□□ 1.29
SMARCAL1-209ENST00000444508 RTF1Q92541 710 aaKnown RBP23.13■■□□□ 1.29
SMARCAL1-209ENST00000444508 PLEKHF1Q96S99 279 aa23.13■■□□□ 1.29
SMARCAL1-209ENST00000444508 LOC102724428A0A0B4J2F2 783 aa23.12■■□□□ 1.29
SMARCAL1-209ENST00000444508 SIK1P57059 783 aa23.12■■□□□ 1.29
SMARCAL1-209ENST00000444508 TEFQ10587 303 aa23.12■■□□□ 1.29
SMARCAL1-209ENST00000444508 C5P01031 1676 aa23.12■■□□□ 1.29
SMARCAL1-209ENST00000444508 ZNF827Q17R98 1081 aa23.1■■□□□ 1.29
SMARCAL1-209ENST00000444508 IL17REQ8NFR9 667 aa23.1■■□□□ 1.29
SMARCAL1-209ENST00000444508 RBM42Q9BTD8 480 aaKnown RBP23.1■■□□□ 1.29
SMARCAL1-209ENST00000444508 HTATSF1O43719 755 aaKnown RBP23.09■■□□□ 1.29
SMARCAL1-209ENST00000444508 ATP6V1AP38606 617 aa23.09■■□□□ 1.29
SMARCAL1-209ENST00000444508 AKT1S1Q96B36 256 aa23.09■■□□□ 1.29
SMARCAL1-209ENST00000444508 TAF1LQ8IZX4 1826 aa23.09■■□□□ 1.29
SMARCAL1-209ENST00000444508 NFE2L2Q16236 605 aa23.08■■□□□ 1.29
SMARCAL1-209ENST00000444508 CEMIPQ8WUJ3 1361 aa23.08■■□□□ 1.29
SMARCAL1-209ENST00000444508 TFCP2L1Q9NZI6 479 aa23.07■■□□□ 1.28
SMARCAL1-209ENST00000444508 ADAMTS8Q9UP79 889 aa23.07■■□□□ 1.28
SMARCAL1-209ENST00000444508 DLG5Q8TDM6 1919 aa23.06■■□□□ 1.28
SMARCAL1-209ENST00000444508 PTCD1O75127 700 aaKnown RBP23.06■■□□□ 1.28
SMARCAL1-209ENST00000444508 MCM10Q7L590 875 aa23.06■■□□□ 1.28
SMARCAL1-209ENST00000444508 ZNF831Q5JPB2 1677 aa23.06■■□□□ 1.28
SMARCAL1-209ENST00000444508 CCDC146Q8IYE0 955 aa23.05■■□□□ 1.28
SMARCAL1-209ENST00000444508 C4BP0C0L5 1744 aa23.05■■□□□ 1.28
SMARCAL1-209ENST00000444508 SIPA1L3O60292 1781 aaPredicted RBP23.04■■□□□ 1.28
SMARCAL1-209ENST00000444508 SLC39A6Q13433 755 aa23.04■■□□□ 1.28
SMARCAL1-209ENST00000444508 TTC5Q8N0Z6 440 aa23.04■■□□□ 1.28
SMARCAL1-209ENST00000444508 RUNDC1Q96C34 613 aa23.04■■□□□ 1.28
SMARCAL1-209ENST00000444508 MRS2Q9HD23 443 aa23.04■■□□□ 1.28
SMARCAL1-209ENST00000444508 QSER1Q2KHR3 1735 aa23.04■■□□□ 1.28
SMARCAL1-209ENST00000444508 CASZ1Q86V15 1759 aa23.04■■□□□ 1.28
SMARCAL1-209ENST00000444508 ITPK1Q13572 414 aa23.03■■□□□ 1.28
SMARCAL1-209ENST00000444508 DCTN1Q14203 1278 aa23.03■■□□□ 1.28
SMARCAL1-209ENST00000444508 AK7Q96M32 723 aa23.03■■□□□ 1.28
SMARCAL1-209ENST00000444508 CCDC184Q52MB2 194 aa23.02■■□□□ 1.28
SMARCAL1-209ENST00000444508 LINC00116Q8NCU8 138 aa23.02■■□□□ 1.28
SMARCAL1-209ENST00000444508 SLC4A9Q96Q91 983 aa23.02■■□□□ 1.28
SMARCAL1-209ENST00000444508 TUBGCP6Q96RT7 1819 aa23.01■■□□□ 1.27
SMARCAL1-209ENST00000444508 RIPK4P57078 832 aa23.01■■□□□ 1.27
SMARCAL1-209ENST00000444508 BTBD11A6QL63 1104 aa23■■□□□ 1.27
SMARCAL1-209ENST00000444508 PDGFDQ9GZP0 370 aaPredicted RBP23■■□□□ 1.27
SMARCAL1-209ENST00000444508 KCPQ6ZWJ8 1503 aa22.99■■□□□ 1.27
SMARCAL1-209ENST00000444508 TMPOP42166 694 aaKnown RBP22.99■■□□□ 1.27
SMARCAL1-209ENST00000444508 LMOD3Q0VAK6 560 aa22.99■■□□□ 1.27
SMARCAL1-209ENST00000444508 ZNF790Q6PG37 636 aa22.99■■□□□ 1.27
SMARCAL1-209ENST00000444508 LRP5O75197 1615 aa22.99■■□□□ 1.27
SMARCAL1-209ENST00000444508 PNPLA7Q6ZV29 1317 aa22.99■■□□□ 1.27
SMARCAL1-209ENST00000444508 UBR2Q8IWV8 1755 aa22.99■■□□□ 1.27
SMARCAL1-209ENST00000444508 FLAD1Q8NFF5 587 aa22.98■■□□□ 1.27
SMARCAL1-209ENST00000444508 COL5A3P25940 1745 aaPredicted RBP22.98■■□□□ 1.27
SMARCAL1-209ENST00000444508 CICQ96RK0 1608 aaPredicted RBP22.97■■□□□ 1.27
SMARCAL1-209ENST00000444508 MSH5O43196 834 aa22.97■■□□□ 1.27
SMARCAL1-209ENST00000444508 ZBTB7AO95365 584 aa22.97■■□□□ 1.27
SMARCAL1-209ENST00000444508 TAF7Q15545 349 aaPredicted RBP22.97■■□□□ 1.27
SMARCAL1-209ENST00000444508 NEUROD2Q15784 382 aa22.97■■□□□ 1.27
SMARCAL1-209ENST00000444508 SPON1Q9HCB6 807 aa22.97■■□□□ 1.27
SMARCAL1-209ENST00000444508 RRP7AQ9Y3A4 280 aaKnown RBP22.97■■□□□ 1.27
SMARCAL1-209ENST00000444508 TJP1Q07157 1748 aa22.96■■□□□ 1.27
SMARCAL1-209ENST00000444508 GNPATO15228 680 aa22.96■■□□□ 1.27
SMARCAL1-209ENST00000444508 VSIG10Q8N0Z9 540 aa22.96■■□□□ 1.27
SMARCAL1-209ENST00000444508 SRCAPQ6ZRS2 3230 aa22.95■■□□□ 1.27
SMARCAL1-209ENST00000444508 RC3H1Q5TC82 1133 aaKnown RBP22.95■■□□□ 1.26
SMARCAL1-209ENST00000444508 UBR3Q6ZT12 1888 aa22.95■■□□□ 1.26
SMARCAL1-209ENST00000444508 PNISRQ8TF01 805 aaKnown RBP22.95■■□□□ 1.26
SMARCAL1-209ENST00000444508 CNTNAP4Q9C0A0 1308 aa22.95■■□□□ 1.26
SMARCAL1-209ENST00000444508 MTFR1LQ9H019 292 aa22.95■■□□□ 1.26
SMARCAL1-209ENST00000444508 PHF14O94880 888 aa22.94■■□□□ 1.26
SMARCAL1-209ENST00000444508 DNAJC10Q8IXB1 793 aa22.94■■□□□ 1.26
SMARCAL1-209ENST00000444508 SLC16A10Q8TF71 515 aa22.94■■□□□ 1.26
SMARCAL1-209ENST00000444508 FMNL2Q96PY5 1086 aa22.94■■□□□ 1.26
SMARCAL1-209ENST00000444508 THUMPD2Q9BTF0 503 aaKnown RBP22.94■■□□□ 1.26
SMARCAL1-209ENST00000444508 SSFA2P28290 1259 aa22.93■■□□□ 1.26
SMARCAL1-209ENST00000444508 COL23A1Q86Y22 540 aaPredicted RBP22.93■■□□□ 1.26
SMARCAL1-209ENST00000444508 ZNF496Q96IT1 587 aaPredicted RBP22.93■■□□□ 1.26
SMARCAL1-209ENST00000444508 HEG1Q9ULI3 1381 aa22.92■■□□□ 1.26
SMARCAL1-209ENST00000444508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.92■■□□□ 1.26
SMARCAL1-209ENST00000444508 CRKLP46109 303 aaKnown RBP22.92■■□□□ 1.26
SMARCAL1-209ENST00000444508 ATF5Q9Y2D1 282 aaPredicted RBP22.92■■□□□ 1.26
SMARCAL1-209ENST00000444508 RTCBQ9Y3I0 505 aaKnown RBP22.92■■□□□ 1.26
SMARCAL1-209ENST00000444508 KCNQ3O43525 872 aa22.91■■□□□ 1.26
SMARCAL1-209ENST00000444508 APAF1O14727 1248 aa22.9■■□□□ 1.26
SMARCAL1-209ENST00000444508 TEX13AQ9BXU3 409 aaPredicted RBP22.9■■□□□ 1.26
SMARCAL1-209ENST00000444508 STARD3NLO95772 234 aa22.89■■□□□ 1.25
SMARCAL1-209ENST00000444508 CYP19A1P11511 503 aaPredicted RBP22.89■■□□□ 1.25
SMARCAL1-209ENST00000444508 AMIGO3Q86WK7 504 aa22.89■■□□□ 1.25
SMARCAL1-209ENST00000444508 CCDC87Q9NVE4 849 aa22.89■■□□□ 1.25
SMARCAL1-209ENST00000444508 MIS18AQ9NYP9 233 aa22.89■■□□□ 1.25
SMARCAL1-209ENST00000444508 PPP1R1BQ9UD71 204 aaPredicted RBP22.89■■□□□ 1.25
SMARCAL1-209ENST00000444508 MYH14Q7Z406 1995 aaKnown RBP22.89■■□□□ 1.25
SMARCAL1-209ENST00000444508 RPS6KA4O75676 772 aa22.88■■□□□ 1.25
SMARCAL1-209ENST00000444508 TRAPPC3LQ5T215 181 aa22.88■■□□□ 1.25
SMARCAL1-209ENST00000444508 TRIM35Q9UPQ4 493 aa22.88■■□□□ 1.25
SMARCAL1-209ENST00000444508 KDM3BQ7LBC6 1761 aa22.87■■□□□ 1.25
SMARCAL1-209ENST00000444508 ADRA2BP18089 450 aa22.87■■□□□ 1.25
SMARCAL1-209ENST00000444508 SMIM5Q71RC9 77 aa22.87■■□□□ 1.25
SMARCAL1-209ENST00000444508 INTS5Q6P9B9 1019 aaKnown RBP22.86■■□□□ 1.25
SMARCAL1-209ENST00000444508 SNRPA1P09661 255 aaKnown RBP22.85■■□□□ 1.25
SMARCAL1-209ENST00000444508 POLD1P28340 1107 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms