RNA–Protein interactions for RNA: ENST00000442398.6

C2CD3-207, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 3,951 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-207ENST00000442398 RBM42Q9BTD8 480 aaKnown RBP7.56□□□□□ -1.2
C2CD3-207ENST00000442398 CHL1O00533 1208 aa7.56□□□□□ -1.2
C2CD3-207ENST00000442398 GBP4Q96PP9 640 aa7.56□□□□□ -1.2
C2CD3-207ENST00000442398 SRGAP3O43295 1099 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 ST18O60284 1047 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 KRT28Q7Z3Y7 464 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 RIC3Q7Z5B4 369 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 NUTM1Q86Y26 1132 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 SRCIN1Q9C0H9 1055 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 BRPF3Q9ULD4 1205 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 REC8O95072 547 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 ARHGAP23Q9P227 1491 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 PEAK1Q9H792 1746 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 IL27Q8NEV9 243 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 LRRCC1Q9C099 1032 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 SIL1Q9H173 461 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
C2CD3-207ENST00000442398 LGR6Q9HBX8 967 aa7.55□□□□□ -1.2
C2CD3-207ENST00000442398 SETD1BQ9UPS6 1966 aaKnown RBP7.55□□□□□ -1.2
C2CD3-207ENST00000442398 PHRF1Q9P1Y6 1649 aaKnown RBP7.55□□□□□ -1.2
C2CD3-207ENST00000442398 ZNF142P52746 1687 aaPredicted RBP7.54□□□□□ -1.2
C2CD3-207ENST00000442398 HSPA2P54652 639 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 BMP2KLQ5H9B9 411 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 DHX37Q8IY37 1157 aaKnown RBP7.54□□□□□ -1.2
C2CD3-207ENST00000442398 KCNH5Q8NCM2 988 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 STRN4Q9NRL3 753 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 PI4KAP2A4QPH2 592 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 PI4KAP1Q8N8J0 262 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 PIK3R4Q99570 1358 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 PIP4K2AP48426 406 aaPredicted RBP7.54□□□□□ -1.2
C2CD3-207ENST00000442398 BRPF1P55201 1214 aaPredicted RBP7.54□□□□□ -1.2
C2CD3-207ENST00000442398 EVA1CP58658 441 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 NBPF6Q5VWK0 638 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 ANKRD24Q8TF21 1146 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 NBPF4Q96M43 638 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 NAP1L2Q9ULW6 460 aaPredicted RBP7.54□□□□□ -1.2
C2CD3-207ENST00000442398 PTPRCP08575 1304 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 PLEKHG1Q9ULL1 1385 aa7.54□□□□□ -1.2
C2CD3-207ENST00000442398 A0A0U1RQG5 324 aaPredicted RBP7.53□□□□□ -1.2
C2CD3-207ENST00000442398 GCP02774 474 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 NEK4P51957 841 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 SLC39A6Q13433 755 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 CEP85Q6P2H3 762 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 CHMP4AQ9BY43 222 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 BCL11BQ9C0K0 894 aaPredicted RBP7.53□□□□□ -1.2
C2CD3-207ENST00000442398 CHPF2Q9P2E5 772 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 TUBGCP6Q96RT7 1819 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 MSH6P52701 1360 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 GOLGA6L3A6NEY3 463 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 NEXNQ0ZGT2 675 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 ANKRD44Q8N8A2 993 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 DDX54Q8TDD1 881 aaKnown RBP7.53□□□□□ -1.2
C2CD3-207ENST00000442398 IFIT2P09913 472 aaKnown RBP7.53□□□□□ -1.2
C2CD3-207ENST00000442398 JARID2Q92833 1246 aaPredicted RBP7.53□□□□□ -1.2
C2CD3-207ENST00000442398 USP6P35125 1406 aa7.53□□□□□ -1.2
C2CD3-207ENST00000442398 SBNO1A3KN83 1393 aa7.52□□□□□ -1.2
C2CD3-207ENST00000442398 FER1L4A9Z1Z3 1794 aa7.52□□□□□ -1.2
C2CD3-207ENST00000442398 ZNF853P0CG23 659 aa7.52□□□□□ -1.2
C2CD3-207ENST00000442398 FGD1P98174 961 aa7.52□□□□□ -1.2
C2CD3-207ENST00000442398 IL17REQ8NFR9 667 aa7.52□□□□□ -1.2
C2CD3-207ENST00000442398 PTCH1Q13635 1447 aa7.52□□□□□ -1.21
C2CD3-207ENST00000442398 TATP17735 454 aaPredicted RBP7.52□□□□□ -1.21
C2CD3-207ENST00000442398 SDSP20132 328 aa7.52□□□□□ -1.21
C2CD3-207ENST00000442398 SIRT2Q8IXJ6 389 aa7.52□□□□□ -1.21
C2CD3-207ENST00000442398 SYTL4Q96C24 671 aaPredicted RBP7.52□□□□□ -1.21
C2CD3-207ENST00000442398 TRIM44Q96DX7 344 aaPredicted RBP7.52□□□□□ -1.21
C2CD3-207ENST00000442398 DCTPP1Q9H773 170 aa7.52□□□□□ -1.21
C2CD3-207ENST00000442398 KCNQ3O43525 872 aa7.52□□□□□ -1.21
C2CD3-207ENST00000442398 DDX58O95786 925 aaKnown RBP7.52□□□□□ -1.21
C2CD3-207ENST00000442398 PLEKHM2Q8IWE5 1019 aa7.52□□□□□ -1.21
C2CD3-207ENST00000442398 DIAPH3Q9NSV4 1193 aa7.52□□□□□ -1.21
C2CD3-207ENST00000442398 DDX49Q9Y6V7 483 aaKnown RBP7.52□□□□□ -1.21
C2CD3-207ENST00000442398 ADAMTS13Q76LX8 1427 aa7.52□□□□□ -1.21
C2CD3-207ENST00000442398 TRAK2O60296 914 aa7.52□□□□□ -1.21
C2CD3-207ENST00000442398 G3BP1Q13283 466 aaKnown RBP eCLIP7.52□□□□□ -1.21
C2CD3-207ENST00000442398 SSH2Q76I76 1423 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 MX1P20591 662 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 TTC22Q5TAA0 569 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 TOM1L2Q6ZVM7 507 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 GPATCH3Q96I76 525 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 K7ELQ4 463 aaPredicted RBP7.51□□□□□ -1.21
C2CD3-207ENST00000442398 ERC2O15083 957 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 MCTP1Q6DN14 999 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 PPP1R42Q7Z4L9 355 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 HOMEZQ8IX15 550 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 DNAAF4Q8WXU2 420 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 IP6K1Q92551 441 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 PRDM11Q9NQV5 511 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 OVOS2A0A0J9YW53 1432 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 OVOS2Q6IE36 1432 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 KAT6BQ8WYB5 2073 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 ABCC4O15439 1325 aa7.51□□□□□ -1.21
C2CD3-207ENST00000442398 PTCD1O75127 700 aaKnown RBP7.51□□□□□ -1.21
C2CD3-207ENST00000442398 L1TD1Q5T7N2 865 aaKnown RBP7.51□□□□□ -1.21
C2CD3-207ENST00000442398 CLASRPQ8N2M8 674 aaKnown RBP7.51□□□□□ -1.21
C2CD3-207ENST00000442398 UPF3BQ9BZI7 483 aaKnown RBP7.51□□□□□ -1.21
C2CD3-207ENST00000442398 FAM208AQ9UK61 1670 aaKnown RBP7.51□□□□□ -1.21
C2CD3-207ENST00000442398 PIK3C2AO00443 1686 aa7.5□□□□□ -1.21
C2CD3-207ENST00000442398 DDX11L8A8MPP1 907 aa7.5□□□□□ -1.21
C2CD3-207ENST00000442398 MCM4P33991 863 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms