RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
ERCC8-203ENST00000439176 WNK3Q9BYP7 1800 aa9.47□□□□□ -0.89
ERCC8-203ENST00000439176 SLC15A2Q16348 729 aa9.47□□□□□ -0.89
ERCC8-203ENST00000439176 PTF1AQ7RTS3 328 aa9.47□□□□□ -0.89
ERCC8-203ENST00000439176 ACSBG1Q96GR2 724 aa9.47□□□□□ -0.89
ERCC8-203ENST00000439176 USP54Q70EL1 1684 aa9.47□□□□□ -0.89
ERCC8-203ENST00000439176 ANKRD36BQ8N2N9 1353 aa9.47□□□□□ -0.89
ERCC8-203ENST00000439176 LTN1O94822 1766 aa9.46□□□□□ -0.9
ERCC8-203ENST00000439176 DDX54Q8TDD1 881 aaKnown RBP9.46□□□□□ -0.9
ERCC8-203ENST00000439176 OCEL1Q9H607 264 aa9.46□□□□□ -0.9
ERCC8-203ENST00000439176 TIMELESSQ9UNS1 1208 aa9.46□□□□□ -0.9
ERCC8-203ENST00000439176 USP47Q96K76 1375 aa9.46□□□□□ -0.9
ERCC8-203ENST00000439176 KAT6BQ8WYB5 2073 aa9.45□□□□□ -0.9
ERCC8-203ENST00000439176 ZBTB7AO95365 584 aa9.45□□□□□ -0.9
ERCC8-203ENST00000439176 HMGB2P26583 209 aaKnown RBP9.45□□□□□ -0.9
ERCC8-203ENST00000439176 HOXC9P31274 260 aa9.45□□□□□ -0.9
ERCC8-203ENST00000439176 HS3ST6Q96QI5 342 aa9.45□□□□□ -0.9
ERCC8-203ENST00000439176 ANO8Q9HCE9 1232 aaPredicted RBP9.45□□□□□ -0.9
ERCC8-203ENST00000439176 SLC27A3Q5K4L6 730 aa9.44□□□□□ -0.9
ERCC8-203ENST00000439176 SYTL4Q96C24 671 aaPredicted RBP9.44□□□□□ -0.9
ERCC8-203ENST00000439176 MTFR1LQ9H019 292 aa9.44□□□□□ -0.9
ERCC8-203ENST00000439176 MAP3K19Q56UN5 1328 aa9.44□□□□□ -0.9
ERCC8-203ENST00000439176 SMG6Q86US8 1419 aaKnown RBP9.44□□□□□ -0.9
ERCC8-203ENST00000439176 RTL1A6NKG5 1358 aa9.43□□□□□ -0.9
ERCC8-203ENST00000439176 CGNL1Q0VF96 1302 aa9.43□□□□□ -0.9
ERCC8-203ENST00000439176 POTEB3A0JP26 581 aa9.43□□□□□ -0.9
ERCC8-203ENST00000439176 FAM205CA6NFA0 338 aa9.43□□□□□ -0.9
ERCC8-203ENST00000439176 FYB1O15117 783 aa9.43□□□□□ -0.9
ERCC8-203ENST00000439176 YY1P25490 414 aa9.43□□□□□ -0.9
ERCC8-203ENST00000439176 POTEBQ6S5H4 581 aa9.43□□□□□ -0.9
ERCC8-203ENST00000439176 ZCRB1Q8TBF4 217 aaKnown RBP9.43□□□□□ -0.9
ERCC8-203ENST00000439176 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
ERCC8-203ENST00000439176 GGNBP2Q9H3C7 697 aa9.43□□□□□ -0.9
ERCC8-203ENST00000439176 TAOK2Q9UL54 1235 aa9.43□□□□□ -0.9
ERCC8-203ENST00000439176 NHSQ6T4R5 1651 aa9.42□□□□□ -0.9
ERCC8-203ENST00000439176 FAM208AQ9UK61 1670 aaKnown RBP9.42□□□□□ -0.9
ERCC8-203ENST00000439176 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.42□□□□□ -0.9
ERCC8-203ENST00000439176 RRS1Q15050 365 aaKnown RBP9.42□□□□□ -0.9
ERCC8-203ENST00000439176 ZFP91Q96JP5 570 aaPredicted RBP9.42□□□□□ -0.9
ERCC8-203ENST00000439176 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
ERCC8-203ENST00000439176 TATP17735 454 aaPredicted RBP9.41□□□□□ -0.9
ERCC8-203ENST00000439176 PRIM1P49642 420 aaKnown RBP9.41□□□□□ -0.9
ERCC8-203ENST00000439176 PDGFDQ9GZP0 370 aaPredicted RBP9.41□□□□□ -0.9
ERCC8-203ENST00000439176 KIF24Q5T7B8 1368 aa9.4□□□□□ -0.9
ERCC8-203ENST00000439176 FBLN1P23142 703 aa9.4□□□□□ -0.9
ERCC8-203ENST00000439176 POLD1P28340 1107 aa9.4□□□□□ -0.9
ERCC8-203ENST00000439176 PTGER2P43116 358 aa9.4□□□□□ -0.9
ERCC8-203ENST00000439176 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
ERCC8-203ENST00000439176 PCGF6Q9BYE7 350 aa9.4□□□□□ -0.9
ERCC8-203ENST00000439176 TFCP2L1Q9NZI6 479 aa9.4□□□□□ -0.9
ERCC8-203ENST00000439176 FLT4P35916 1363 aa9.39□□□□□ -0.91
ERCC8-203ENST00000439176 NBPF6Q5VWK0 638 aa9.39□□□□□ -0.91
ERCC8-203ENST00000439176 NBPF4Q96M43 638 aa9.39□□□□□ -0.91
ERCC8-203ENST00000439176 ARXQ96QS3 562 aa9.39□□□□□ -0.91
ERCC8-203ENST00000439176 CASZ1Q86V15 1759 aa9.39□□□□□ -0.91
ERCC8-203ENST00000439176 INSRP06213 1382 aa9.38□□□□□ -0.91
ERCC8-203ENST00000439176 BTAF1O14981 1849 aa9.38□□□□□ -0.91
ERCC8-203ENST00000439176 PCDH11XQ9BZA7 1347 aa9.38□□□□□ -0.91
ERCC8-203ENST00000439176 PCDH11YQ9BZA8 1340 aa9.38□□□□□ -0.91
ERCC8-203ENST00000439176 PPM1GO15355 546 aaPredicted RBP9.38□□□□□ -0.91
ERCC8-203ENST00000439176 HSP90AB2PQ58FF8 381 aa9.38□□□□□ -0.91
ERCC8-203ENST00000439176 SYT17Q9BSW7 474 aa9.38□□□□□ -0.91
ERCC8-203ENST00000439176 POLR3GLQ9BT43 218 aa9.38□□□□□ -0.91
ERCC8-203ENST00000439176 FHDC1Q9C0D6 1143 aaPredicted RBP9.38□□□□□ -0.91
ERCC8-203ENST00000439176 LRRC4BQ9NT99 713 aa9.38□□□□□ -0.91
ERCC8-203ENST00000439176 CCNL1Q9UK58 526 aaPredicted RBP9.38□□□□□ -0.91
ERCC8-203ENST00000439176 ZNF827Q17R98 1081 aa9.37□□□□□ -0.91
ERCC8-203ENST00000439176 USHBP1Q8N6Y0 703 aa9.37□□□□□ -0.91
ERCC8-203ENST00000439176 SPG7Q9UQ90 795 aa9.36□□□□□ -0.91
ERCC8-203ENST00000439176 NSD3Q9BZ95 1437 aa9.36□□□□□ -0.91
ERCC8-203ENST00000439176 MEGF6O75095 1541 aa9.36□□□□□ -0.91
ERCC8-203ENST00000439176 C3orf67Q6ZVT6 689 aa9.35□□□□□ -0.91
ERCC8-203ENST00000439176 SMARCC1Q92922 1105 aaPredicted RBP9.35□□□□□ -0.91
ERCC8-203ENST00000439176 CARD14Q9BXL6 1004 aa9.35□□□□□ -0.91
ERCC8-203ENST00000439176 KIF20BQ96Q89 1820 aa9.34□□□□□ -0.91
ERCC8-203ENST00000439176 KCNQ4P56696 695 aa9.34□□□□□ -0.91
ERCC8-203ENST00000439176 EIF4G2P78344 907 aaKnown RBP eCLIP9.34□□□□□ -0.91
ERCC8-203ENST00000439176 GPR162Q16538 588 aa9.34□□□□□ -0.91
ERCC8-203ENST00000439176 MPRIPQ6WCQ1 1025 aa9.34□□□□□ -0.91
ERCC8-203ENST00000439176 FLAD1Q8NFF5 587 aa9.34□□□□□ -0.91
ERCC8-203ENST00000439176 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.91
ERCC8-203ENST00000439176 MYOM1P52179 1685 aa9.34□□□□□ -0.91
ERCC8-203ENST00000439176 MAP3K5Q99683 1374 aa9.34□□□□□ -0.91
ERCC8-203ENST00000439176 PAPPAQ13219 1627 aa9.34□□□□□ -0.91
ERCC8-203ENST00000439176 WASHC2AQ641Q2 1341 aa9.33□□□□□ -0.92
ERCC8-203ENST00000439176 PNPLA7Q6ZV29 1317 aa9.33□□□□□ -0.92
ERCC8-203ENST00000439176 MKRN3Q13064 507 aaKnown RBP9.33□□□□□ -0.92
ERCC8-203ENST00000439176 HS6ST3Q8IZP7 471 aa9.33□□□□□ -0.92
ERCC8-203ENST00000439176 PDCD7Q8N8D1 485 aaKnown RBP9.33□□□□□ -0.92
ERCC8-203ENST00000439176 CCER1Q8TC90 406 aaPredicted RBP9.33□□□□□ -0.92
ERCC8-203ENST00000439176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.33□□□□□ -0.922e-6■■□□□ 12.2
ERCC8-203ENST00000439176 NSD2O96028 1365 aa9.33□□□□□ -0.92
ERCC8-203ENST00000439176 RGPD2P0DJD1 1756 aa9.32□□□□□ -0.92
ERCC8-203ENST00000439176 DOT1LQ8TEK3 1739 aa9.32□□□□□ -0.92
ERCC8-203ENST00000439176 EFCAB3Q8N7B9 438 aa9.32□□□□□ -0.92
ERCC8-203ENST00000439176 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
ERCC8-203ENST00000439176 PALLDQ8WX93 1383 aa9.32□□□□□ -0.92
ERCC8-203ENST00000439176 STK25O00506 426 aa9.31□□□□□ -0.92
ERCC8-203ENST00000439176 CYP27B1O15528 508 aa9.31□□□□□ -0.92
ERCC8-203ENST00000439176 TNNT2P45379 298 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms