RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 SART3Q15020 963 aaKnown RBP7.73□□□□□ -1.17
MCF2-205ENST00000437564 SLC5A9Q2M3M2 681 aa7.73□□□□□ -1.17
MCF2-205ENST00000437564 SMYD5Q6GMV2 418 aa7.73□□□□□ -1.17
MCF2-205ENST00000437564 DRAXINQ8NBI3 349 aaPredicted RBP7.73□□□□□ -1.17
MCF2-205ENST00000437564 TDRD7Q8NHU6 1098 aaKnown RBP7.73□□□□□ -1.17
MCF2-205ENST00000437564 TRERF1Q96PN7 1200 aa7.73□□□□□ -1.17
MCF2-205ENST00000437564 SGSM2O43147 1006 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 VDRP11473 427 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 GYS2P54840 703 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 LEKR1Q6ZMV7 388 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 NCAPG2Q86XI2 1143 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 SAMD3Q8N6K7 520 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 FAXDC2Q96IV6 333 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 RMDN2Q96LZ7 410 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 IRF2BPLQ9H1B7 796 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 TSPYL2Q9H2G4 693 aaPredicted RBP7.72□□□□□ -1.17
MCF2-205ENST00000437564 JADE2Q9NQC1 790 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.72□□□□□ -1.17
MCF2-205ENST00000437564 BLOC1S6Q9UL45 172 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 AKNAQ7Z591 1439 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 PLEKHG2Q9H7P9 1386 aa7.72□□□□□ -1.17
MCF2-205ENST00000437564 RBM47A0AV96 593 aaKnown RBP7.71□□□□□ -1.17
MCF2-205ENST00000437564 GALR2O43603 387 aaPredicted RBP7.71□□□□□ -1.17
MCF2-205ENST00000437564 SMARCA5O60264 1052 aaPredicted RBP7.71□□□□□ -1.17
MCF2-205ENST00000437564 KIF5CO60282 957 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 KIF4AO95239 1232 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 OATP04181 439 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 MYBL2P10244 700 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 COPB2P35606 906 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 PRPHP41219 470 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 GPS2Q13227 327 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 PDIA5Q14554 519 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 C8orf34Q49A92 452 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 ZFYVE27Q5T4F4 411 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 SRLQ86TD4 932 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 GAS2L3Q86XJ1 694 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 KIF18AQ8NI77 898 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 SMCR8Q8TEV9 937 aaPredicted RBP7.71□□□□□ -1.17
MCF2-205ENST00000437564 MIEF2Q96C03 454 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 SPATS2LQ9NUQ6 558 aaKnown RBP7.71□□□□□ -1.17
MCF2-205ENST00000437564 TRAK1Q9UPV9 953 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 AKAP2Q9Y2D5 859 aa7.71□□□□□ -1.17
MCF2-205ENST00000437564 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.71□□□□□ -1.17
MCF2-205ENST00000437564 CPP00450 1065 aa7.71□□□□□ -1.18
MCF2-205ENST00000437564 ALDH1B1P30837 517 aa7.71□□□□□ -1.18
MCF2-205ENST00000437564 RDXP35241 583 aaKnown RBP7.71□□□□□ -1.18
MCF2-205ENST00000437564 RPS6KA3P51812 740 aa7.71□□□□□ -1.18
MCF2-205ENST00000437564 TSNAXIP1Q2TAA8 658 aa7.71□□□□□ -1.18
MCF2-205ENST00000437564 SYT10Q6XYQ8 523 aa7.71□□□□□ -1.18
MCF2-205ENST00000437564 EVI5LQ96CN4 794 aa7.71□□□□□ -1.18
MCF2-205ENST00000437564 AK7Q96M32 723 aa7.71□□□□□ -1.18
MCF2-205ENST00000437564 CRACR2AQ9BSW2 395 aa7.71□□□□□ -1.18
MCF2-205ENST00000437564 ARIH1Q9Y4X5 557 aaPredicted RBP7.71□□□□□ -1.18
MCF2-205ENST00000437564 HTATSF1O43719 755 aaKnown RBP7.7□□□□□ -1.18
MCF2-205ENST00000437564 CCDC186Q7Z3E2 898 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 TAX1BP1Q86VP1 789 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 IQCF2Q8IXL9 164 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 PIBF1Q8WXW3 757 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 TEKT1Q969V4 418 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 A1CFQ9NQ94 594 aaKnown RBP7.7□□□□□ -1.18
MCF2-205ENST00000437564 SPTLC3Q9NUV7 552 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 ZNF446Q9NWS9 450 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 V9GYY5 206 aaPredicted RBP7.7□□□□□ -1.18
MCF2-205ENST00000437564 ECEL1O95672 775 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 TRPC1P48995 793 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 NUCB2P80303 420 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 GRIK3Q13003 919 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 FKBP5Q13451 457 aaPredicted RBP7.7□□□□□ -1.18
MCF2-205ENST00000437564 CLEC4GQ6UXB4 293 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 TEX11Q8IYF3 940 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 IQUBQ8NA54 791 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 GBP4Q96PP9 640 aa7.7□□□□□ -1.18
MCF2-205ENST00000437564 CEP162Q5TB80 1403 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 VIRMAQ69YN4 1812 aaKnown RBP7.69□□□□□ -1.18
MCF2-205ENST00000437564 NLRP6P59044 892 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 ZNF445P59923 1031 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 PSMD2Q13200 908 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 TBC1D25Q3MII6 688 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 CCDC178Q5BJE1 867 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 LCE2DQ5TA82 110 aaPredicted RBP7.69□□□□□ -1.18
MCF2-205ENST00000437564 NAIF1Q69YI7 327 aaPredicted RBP7.69□□□□□ -1.18
MCF2-205ENST00000437564 TTC19Q6DKK2 380 aaPredicted RBP7.69□□□□□ -1.18
MCF2-205ENST00000437564 C16orf87Q6PH81 154 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 NFXL1Q6ZNB6 911 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 EFCAB3Q8N7B9 438 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 MORC4Q8TE76 937 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 DNAAF4Q8WXU2 420 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 KIF1BPQ96EK5 621 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 FMNL2Q96PY5 1086 aa7.69□□□□□ -1.18
MCF2-205ENST00000437564 CGNL1Q0VF96 1302 aa7.68□□□□□ -1.18
MCF2-205ENST00000437564 EIF5P55010 431 aaKnown RBP7.68□□□□□ -1.18
MCF2-205ENST00000437564 CCDC15Q0P6D6 951 aa7.68□□□□□ -1.18
MCF2-205ENST00000437564 NUTM2GQ5VZR2 741 aa7.68□□□□□ -1.18
MCF2-205ENST00000437564 ANKRD13BQ86YJ7 626 aa7.68□□□□□ -1.18
MCF2-205ENST00000437564 MICALL1Q8N3F8 863 aa7.68□□□□□ -1.18
MCF2-205ENST00000437564 ARMC2Q8NEN0 867 aa7.68□□□□□ -1.18
MCF2-205ENST00000437564 GIMAP7Q8NHV1 300 aa7.68□□□□□ -1.18
MCF2-205ENST00000437564 GOLGA5Q8TBA6 731 aa7.68□□□□□ -1.18
MCF2-205ENST00000437564 SPATA32Q96LK8 384 aa7.68□□□□□ -1.18
MCF2-205ENST00000437564 AGBL1Q96MI9 1066 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms