RNA–Protein interactions for RNA: ENST00000437025.6

GABRA1-204, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-204ENST00000437025 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
GABRA1-204ENST00000437025 PNMA6EA0A0J9YXQ4 647 aa13.07□□□□□ -0.32
GABRA1-204ENST00000437025 DTNBO60941 627 aa13.07□□□□□ -0.32
GABRA1-204ENST00000437025 MCCP23508 829 aa13.07□□□□□ -0.32
GABRA1-204ENST00000437025 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
GABRA1-204ENST00000437025 LARP6Q9BRS8 491 aaKnown RBP13.07□□□□□ -0.32
GABRA1-204ENST00000437025 PDE1AP54750 535 aa13.06□□□□□ -0.32
GABRA1-204ENST00000437025 USP26Q9BXU7 913 aa13.06□□□□□ -0.32
GABRA1-204ENST00000437025 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
GABRA1-204ENST00000437025 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
GABRA1-204ENST00000437025 GNAI3P08754 354 aa13.06□□□□□ -0.32
GABRA1-204ENST00000437025 PLEKHG3A1L390 1219 aa13.05□□□□□ -0.32
GABRA1-204ENST00000437025 BAG4O95429 457 aaKnown RBP13.05□□□□□ -0.32
GABRA1-204ENST00000437025 MX1P20591 662 aa13.05□□□□□ -0.32
GABRA1-204ENST00000437025 FLT4P35916 1363 aa13.04□□□□□ -0.32
GABRA1-204ENST00000437025 AIMP1Q12904 312 aaKnown RBP13.04□□□□□ -0.32
GABRA1-204ENST00000437025 THEMISQ8N1K5 641 aaPredicted RBP13.04□□□□□ -0.32
GABRA1-204ENST00000437025 SKOR2Q2VWA4 1001 aaPredicted RBP13.04□□□□□ -0.32
GABRA1-204ENST00000437025 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
GABRA1-204ENST00000437025 GAS2L3Q86XJ1 694 aa13.04□□□□□ -0.32
GABRA1-204ENST00000437025 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
GABRA1-204ENST00000437025 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
GABRA1-204ENST00000437025 USP6P35125 1406 aa13.03□□□□□ -0.32
GABRA1-204ENST00000437025 NUCB2P80303 420 aa13.03□□□□□ -0.32
GABRA1-204ENST00000437025 TAF7Q15545 349 aaPredicted RBP13.03□□□□□ -0.32
GABRA1-204ENST00000437025 DDX54Q8TDD1 881 aaKnown RBP13.03□□□□□ -0.32
GABRA1-204ENST00000437025 RBM27Q9P2N5 1060 aaKnown RBP13.03□□□□□ -0.32
GABRA1-204ENST00000437025 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
GABRA1-204ENST00000437025 HOXC9P31274 260 aa13.03□□□□□ -0.32
GABRA1-204ENST00000437025 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
GABRA1-204ENST00000437025 KCNA4P22459 653 aa13.02□□□□□ -0.32
GABRA1-204ENST00000437025 KCNJ4P48050 445 aa13.02□□□□□ -0.32
GABRA1-204ENST00000437025 RNF214Q8ND24 703 aa13.02□□□□□ -0.32
GABRA1-204ENST00000437025 IL17REQ8NFR9 667 aa13.02□□□□□ -0.32
GABRA1-204ENST00000437025 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.32
GABRA1-204ENST00000437025 NASPP49321 788 aaPredicted RBP13.02□□□□□ -0.33
GABRA1-204ENST00000437025 SRCIN1Q9C0H9 1055 aa13.01□□□□□ -0.33
GABRA1-204ENST00000437025 C9orf78Q9NZ63 289 aaPredicted RBP13.01□□□□□ -0.33
GABRA1-204ENST00000437025 KIAA1211Q6ZU35 1233 aa13.01□□□□□ -0.33
GABRA1-204ENST00000437025 LGR6Q9HBX8 967 aa13.01□□□□□ -0.33
GABRA1-204ENST00000437025 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
GABRA1-204ENST00000437025 GDPD2Q9HCC8 539 aa13.01□□□□□ -0.33
GABRA1-204ENST00000437025 TTC21AQ8NDW8 1320 aa13□□□□□ -0.33
GABRA1-204ENST00000437025 PI4KAP2A4QPH2 592 aa13□□□□□ -0.33
GABRA1-204ENST00000437025 KCNQ3O43525 872 aa13□□□□□ -0.33
GABRA1-204ENST00000437025 PI4KAP1Q8N8J0 262 aa13□□□□□ -0.33
GABRA1-204ENST00000437025 CHPF2Q9P2E5 772 aa13□□□□□ -0.33
GABRA1-204ENST00000437025 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
GABRA1-204ENST00000437025 PLCB2Q00722 1185 aa13□□□□□ -0.33
GABRA1-204ENST00000437025 HSP90AA2PQ14568 343 aaPredicted RBP13□□□□□ -0.33
GABRA1-204ENST00000437025 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
GABRA1-204ENST00000437025 SBNO1A3KN83 1393 aa12.99□□□□□ -0.33
GABRA1-204ENST00000437025 C1orf141Q5JVX7 400 aa12.99□□□□□ -0.33
GABRA1-204ENST00000437025 SIRT1Q96EB6 747 aa12.99□□□□□ -0.33
GABRA1-204ENST00000437025 DLC1Q96QB1 1528 aa12.99□□□□□ -0.33
GABRA1-204ENST00000437025 UNC5CLQ8IV45 518 aa12.99□□□□□ -0.33
GABRA1-204ENST00000437025 PALD1Q9ULE6 856 aa12.99□□□□□ -0.33
GABRA1-204ENST00000437025 KIAA0232Q92628 1395 aa12.99□□□□□ -0.33
GABRA1-204ENST00000437025 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
GABRA1-204ENST00000437025 CWC27Q6UX04 472 aaKnown RBP12.99□□□□□ -0.33
GABRA1-204ENST00000437025 MPNDQ8N594 471 aa12.99□□□□□ -0.33
GABRA1-204ENST00000437025 FSD2A1L4K1 749 aa12.98□□□□□ -0.33
GABRA1-204ENST00000437025 PTMSP20962 102 aa12.98□□□□□ -0.33
GABRA1-204ENST00000437025 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
GABRA1-204ENST00000437025 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
GABRA1-204ENST00000437025 TMX3Q96JJ7 454 aa12.98□□□□□ -0.33
GABRA1-204ENST00000437025 ESYT1Q9BSJ8 1104 aa12.98□□□□□ -0.33
GABRA1-204ENST00000437025 ATP10DQ9P241 1426 aa12.98□□□□□ -0.33
GABRA1-204ENST00000437025 ATP8B2P98198 1209 aa12.98□□□□□ -0.33
GABRA1-204ENST00000437025 SIL1Q9H173 461 aa12.98□□□□□ -0.33
GABRA1-204ENST00000437025 SPG7Q9UQ90 795 aa12.98□□□□□ -0.33
GABRA1-204ENST00000437025 ADAMTS13Q76LX8 1427 aa12.97□□□□□ -0.33
GABRA1-204ENST00000437025 ZC3H6P61129 1189 aaKnown RBP12.97□□□□□ -0.33
GABRA1-204ENST00000437025 DIP2BQ9P265 1576 aa12.97□□□□□ -0.33
GABRA1-204ENST00000437025 PTMAP06454 111 aaKnown RBP12.97□□□□□ -0.33
GABRA1-204ENST00000437025 NBPF7P0C2Y1 421 aaPredicted RBP12.97□□□□□ -0.33
GABRA1-204ENST00000437025 TBX22Q9Y458 520 aa12.97□□□□□ -0.33
GABRA1-204ENST00000437025 ESPNB1AK53 854 aa12.97□□□□□ -0.33
GABRA1-204ENST00000437025 CSB-PGBD3P0DP91 1061 aa12.97□□□□□ -0.33
GABRA1-204ENST00000437025 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
GABRA1-204ENST00000437025 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
GABRA1-204ENST00000437025 USP44Q9H0E7 712 aa12.97□□□□□ -0.33
GABRA1-204ENST00000437025 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
GABRA1-204ENST00000437025 SPATA31D1Q6ZQQ2 1576 aa12.96□□□□□ -0.33
GABRA1-204ENST00000437025 IGSF1Q8N6C5 1336 aa12.96□□□□□ -0.33
GABRA1-204ENST00000437025 ARHGEF10O15013 1369 aa12.96□□□□□ -0.33
GABRA1-204ENST00000437025 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.34
GABRA1-204ENST00000437025 MAP3K5Q99683 1374 aa12.96□□□□□ -0.34
GABRA1-204ENST00000437025 SYCE3A1L190 88 aa12.96□□□□□ -0.34
GABRA1-204ENST00000437025 JARID2Q92833 1246 aaPredicted RBP12.96□□□□□ -0.34
GABRA1-204ENST00000437025 PA2G4Q9UQ80 394 aaKnown RBP12.96□□□□□ -0.34
GABRA1-204ENST00000437025 CRB1P82279 1406 aa12.96□□□□□ -0.34
GABRA1-204ENST00000437025 MYL6BP14649 208 aa12.95□□□□□ -0.34
GABRA1-204ENST00000437025 MSNP26038 577 aaKnown RBP12.95□□□□□ -0.34
GABRA1-204ENST00000437025 CHMLP26374 656 aa12.95□□□□□ -0.34
GABRA1-204ENST00000437025 OVOS2A0A0J9YW53 1432 aa12.95□□□□□ -0.34
GABRA1-204ENST00000437025 OVOS2Q6IE36 1432 aa12.95□□□□□ -0.34
GABRA1-204ENST00000437025 PLEKHG1Q9ULL1 1385 aa12.95□□□□□ -0.34
GABRA1-204ENST00000437025 PTPRUQ92729 1446 aa12.95□□□□□ -0.34
GABRA1-204ENST00000437025 CPA1P15085 419 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms