RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 NCBP3Q53F19 620 aaKnown RBP21.96■■□□□ 1.11
CALD1-209ENST00000436461 SPINK5Q9NQ38 1064 aaPredicted RBP21.96■■□□□ 1.11
CALD1-209ENST00000436461 TMOD3Q9NYL9 352 aa21.96■■□□□ 1.11
CALD1-209ENST00000436461 BTAF1O14981 1849 aa21.95■■□□□ 1.1
CALD1-209ENST00000436461 TRIM37O94972 964 aa21.95■■□□□ 1.1
CALD1-209ENST00000436461 PIGBQ92521 554 aa21.95■■□□□ 1.1
CALD1-209ENST00000436461 ZBED9Q6R2W3 1325 aa21.95■■□□□ 1.1
CALD1-209ENST00000436461 NGEFQ8N5V2 710 aa21.95■■□□□ 1.1
CALD1-209ENST00000436461 CDCA7LQ96GN5 454 aa21.95■■□□□ 1.1
CALD1-209ENST00000436461 SLC39A6Q13433 755 aa21.94■■□□□ 1.1
CALD1-209ENST00000436461 KCNQ3O43525 872 aa21.92■■□□□ 1.1
CALD1-209ENST00000436461 TAF7Q15545 349 aaPredicted RBP21.92■■□□□ 1.1
CALD1-209ENST00000436461 ILDR2Q71H61 639 aa21.92■■□□□ 1.1
CALD1-209ENST00000436461 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
CALD1-209ENST00000436461 KDM3BQ7LBC6 1761 aa21.92■■□□□ 1.1
CALD1-209ENST00000436461 BTBD11A6QL63 1104 aa21.91■■□□□ 1.1
CALD1-209ENST00000436461 PAPPAQ13219 1627 aa21.91■■□□□ 1.1
CALD1-209ENST00000436461 TSR2Q969E8 191 aaKnown RBP21.91■■□□□ 1.1
CALD1-209ENST00000436461 ASAP1Q9ULH1 1129 aa21.91■■□□□ 1.1
CALD1-209ENST00000436461 GOLGA2Q08379 1002 aa21.9■■□□□ 1.1
CALD1-209ENST00000436461 TSPYL4Q9UJ04 414 aa21.9■■□□□ 1.1
CALD1-209ENST00000436461 TNS1Q9HBL0 1735 aaKnown RBP21.89■■□□□ 1.1
CALD1-209ENST00000436461 CFAP44Q96MT7 982 aa21.89■■□□□ 1.09
CALD1-209ENST00000436461 MBIPQ9NS73 344 aa21.89■■□□□ 1.09
CALD1-209ENST00000436461 ZNF853P0CG23 659 aa21.88■■□□□ 1.09
CALD1-209ENST00000436461 CALD1Q05682 793 aaKnown RBP21.88■■□□□ 1.09
CALD1-209ENST00000436461 BCL11BQ9C0K0 894 aaPredicted RBP21.88■■□□□ 1.09
CALD1-209ENST00000436461 ATG3Q9NT62 314 aa21.88■■□□□ 1.09
CALD1-209ENST00000436461 IFT57Q9NWB7 429 aa21.88■■□□□ 1.09
CALD1-209ENST00000436461 CHL1O00533 1208 aa21.87■■□□□ 1.09
CALD1-209ENST00000436461 GNAI1P63096 354 aa21.87■■□□□ 1.09
CALD1-209ENST00000436461 IL16Q14005 1332 aa21.87■■□□□ 1.09
CALD1-209ENST00000436461 UBR2Q8IWV8 1755 aa21.86■■□□□ 1.09
CALD1-209ENST00000436461 ZNF790Q6PG37 636 aa21.86■■□□□ 1.09
CALD1-209ENST00000436461 SLFN5Q08AF3 891 aa21.85■■□□□ 1.09
CALD1-209ENST00000436461 KRT24Q2M2I5 525 aa21.85■■□□□ 1.09
CALD1-209ENST00000436461 FANCIQ9NVI1 1328 aa21.85■■□□□ 1.09
CALD1-209ENST00000436461 PTCD1O75127 700 aaKnown RBP21.84■■□□□ 1.09
CALD1-209ENST00000436461 KCPQ6ZWJ8 1503 aa21.84■■□□□ 1.09
CALD1-209ENST00000436461 TTC5Q8N0Z6 440 aa21.84■■□□□ 1.09
CALD1-209ENST00000436461 E9PSI1 815 aa21.83■■□□□ 1.08
CALD1-209ENST00000436461 PALLDQ8WX93 1383 aa21.83■■□□□ 1.08
CALD1-209ENST00000436461 ZNF496Q96IT1 587 aaPredicted RBP21.82■■□□□ 1.08
CALD1-209ENST00000436461 APBA3O96018 575 aa21.81■■□□□ 1.08
CALD1-209ENST00000436461 RBM42Q9BTD8 480 aaKnown RBP21.81■■□□□ 1.08
CALD1-209ENST00000436461 LY75O60449 1722 aa21.81■■□□□ 1.08
CALD1-209ENST00000436461 C5P01031 1676 aa21.81■■□□□ 1.08
CALD1-209ENST00000436461 KCNQ4P56696 695 aa21.8■■□□□ 1.08
CALD1-209ENST00000436461 EIF4A1P60842 406 aaKnown RBP21.8■■□□□ 1.08
CALD1-209ENST00000436461 DUSP27Q5VZP5 1158 aa21.8■■□□□ 1.08
CALD1-209ENST00000436461 MYH16Q9H6N6 1097 aa21.8■■□□□ 1.08
CALD1-209ENST00000436461 BABAM1Q9NWV8 329 aa21.8■■□□□ 1.08
CALD1-209ENST00000436461 PRAMEF22A3QJZ6 481 aa21.8■■□□□ 1.08
CALD1-209ENST00000436461 ELL2O00472 640 aaPredicted RBP21.8■■□□□ 1.08
CALD1-209ENST00000436461 SLC4A9Q96Q91 983 aa21.8■■□□□ 1.08
CALD1-209ENST00000436461 TRMT2AQ8IZ69 625 aaKnown RBP21.79■■□□□ 1.08
CALD1-209ENST00000436461 EXOSC9Q06265 439 aaKnown RBP21.78■■□□□ 1.08
CALD1-209ENST00000436461 TSPYL6Q8N831 410 aa21.78■■□□□ 1.08
CALD1-209ENST00000436461 C8orf58Q8NAV2 365 aa21.78■■□□□ 1.08
CALD1-209ENST00000436461 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.08
CALD1-209ENST00000436461 FMNL2Q96PY5 1086 aa21.77■■□□□ 1.08
CALD1-209ENST00000436461 LOC102724428A0A0B4J2F2 783 aa21.77■■□□□ 1.07
CALD1-209ENST00000436461 SIK1P57059 783 aa21.77■■□□□ 1.07
CALD1-209ENST00000436461 TJP1Q07157 1748 aa21.76■■□□□ 1.07
CALD1-209ENST00000436461 HEG1Q9ULI3 1381 aa21.76■■□□□ 1.07
CALD1-209ENST00000436461 DEFB132Q7Z7B7 95 aa21.76■■□□□ 1.07
CALD1-209ENST00000436461 EN1Q05925 392 aaPredicted RBP21.75■■□□□ 1.07
CALD1-209ENST00000436461 SF3B2Q13435 895 aaKnown RBP21.74■■□□□ 1.07
CALD1-209ENST00000436461 UPF1Q92900 1129 aaKnown RBP eCLIP21.74■■□□□ 1.07
CALD1-209ENST00000436461 GIGYF1O75420 1035 aaPredicted RBP21.73■■□□□ 1.07
CALD1-209ENST00000436461 ATP6V1AP38606 617 aa21.73■■□□□ 1.07
CALD1-209ENST00000436461 ITPK1Q13572 414 aa21.73■■□□□ 1.07
CALD1-209ENST00000436461 DNAJC10Q8IXB1 793 aa21.73■■□□□ 1.07
CALD1-209ENST00000436461 PROM2Q8N271 834 aa21.73■■□□□ 1.07
CALD1-209ENST00000436461 NECTIN2Q92692 538 aa21.73■■□□□ 1.07
CALD1-209ENST00000436461 CCNL1Q9UK58 526 aaPredicted RBP21.73■■□□□ 1.07
CALD1-209ENST00000436461 TAF1LQ8IZX4 1826 aa21.72■■□□□ 1.07
CALD1-209ENST00000436461 LAMB4A4D0S4 1761 aa21.72■■□□□ 1.07
CALD1-209ENST00000436461 PLSCR1O15162 318 aa21.72■■□□□ 1.07
CALD1-209ENST00000436461 EZH2Q15910 746 aaKnown RBP21.72■■□□□ 1.07
CALD1-209ENST00000436461 LRRC4BQ9NT99 713 aa21.72■■□□□ 1.07
CALD1-209ENST00000436461 USP16Q9Y5T5 823 aa21.72■■□□□ 1.07
CALD1-209ENST00000436461 SNRPA1P09661 255 aaKnown RBP21.71■■□□□ 1.07
CALD1-209ENST00000436461 TXNRD1Q16881 649 aa21.71■■□□□ 1.07
CALD1-209ENST00000436461 TWISTNBQ3B726 338 aaPredicted RBP21.71■■□□□ 1.07
CALD1-209ENST00000436461 RGPD3A6NKT7 1758 aaPredicted RBP21.71■■□□□ 1.07
CALD1-209ENST00000436461 RGPD4Q7Z3J3 1758 aa21.71■■□□□ 1.07
CALD1-209ENST00000436461 EIF2S2P20042 333 aaKnown RBP21.7■■□□□ 1.06
CALD1-209ENST00000436461 COL5A3P25940 1745 aaPredicted RBP21.7■■□□□ 1.06
CALD1-209ENST00000436461 BAG6P46379 1132 aa21.69■■□□□ 1.06
CALD1-209ENST00000436461 ZNF831Q5JPB2 1677 aa21.69■■□□□ 1.06
CALD1-209ENST00000436461 TCERG1O14776 1098 aaKnown RBP21.69■■□□□ 1.06
CALD1-209ENST00000436461 VSIG10Q8N0Z9 540 aa21.69■■□□□ 1.06
CALD1-209ENST00000436461 LINC00116Q8NCU8 138 aa21.69■■□□□ 1.06
CALD1-209ENST00000436461 CAMKK2Q96RR4 588 aa21.69■■□□□ 1.06
CALD1-209ENST00000436461 CICQ96RK0 1608 aaPredicted RBP21.68■■□□□ 1.06
CALD1-209ENST00000436461 VAMP4O75379 141 aa21.68■■□□□ 1.06
CALD1-209ENST00000436461 PIP4K2AP48426 406 aaPredicted RBP21.68■■□□□ 1.06
CALD1-209ENST00000436461 MYH14Q7Z406 1995 aaKnown RBP21.67■■□□□ 1.06
CALD1-209ENST00000436461 CCDC125Q86Z20 511 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms