RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 CWC25Q9NXE8 425 aaPredicted RBP18.56■□□□□ 0.56
NEDD4-202ENST00000435532 ODF2Q5BJF6 829 aa18.56■□□□□ 0.56
NEDD4-202ENST00000435532 DCTN1Q14203 1278 aa18.56■□□□□ 0.56
NEDD4-202ENST00000435532 IMMTQ16891 758 aaKnown RBP18.56■□□□□ 0.56
NEDD4-202ENST00000435532 SPINK5Q9NQ38 1064 aaPredicted RBP18.56■□□□□ 0.56
NEDD4-202ENST00000435532 ATP6V1AP38606 617 aa18.56■□□□□ 0.56
NEDD4-202ENST00000435532 ZNF219Q9P2Y4 722 aaPredicted RBP18.56■□□□□ 0.56
NEDD4-202ENST00000435532 NBPF6Q5VWK0 638 aa18.56■□□□□ 0.56
NEDD4-202ENST00000435532 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
NEDD4-202ENST00000435532 NBPF4Q96M43 638 aa18.56■□□□□ 0.56
NEDD4-202ENST00000435532 LDHCP07864 332 aa18.55■□□□□ 0.56
NEDD4-202ENST00000435532 SHANK2Q9UPX8 1470 aa18.55■□□□□ 0.56
NEDD4-202ENST00000435532 WASF1Q92558 559 aa18.54■□□□□ 0.56
NEDD4-202ENST00000435532 PTPRCP08575 1304 aa18.54■□□□□ 0.56
NEDD4-202ENST00000435532 ZNF76P36508 570 aa18.54■□□□□ 0.56
NEDD4-202ENST00000435532 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
NEDD4-202ENST00000435532 ZBTB3Q9H5J0 574 aa18.54■□□□□ 0.56
NEDD4-202ENST00000435532 ATP2B1P20020 1258 aa18.53■□□□□ 0.56
NEDD4-202ENST00000435532 GPTP24298 496 aa18.53■□□□□ 0.56
NEDD4-202ENST00000435532 NEK4P51957 841 aa18.53■□□□□ 0.56
NEDD4-202ENST00000435532 SLFN5Q08AF3 891 aa18.53■□□□□ 0.56
NEDD4-202ENST00000435532 CFAP74Q9C0B2 1584 aa18.53■□□□□ 0.56
NEDD4-202ENST00000435532 MYO1BO43795 1136 aa18.53■□□□□ 0.56
NEDD4-202ENST00000435532 SPTY2D1Q68D10 685 aaPredicted RBP18.53■□□□□ 0.56
NEDD4-202ENST00000435532 PIP4K2AP48426 406 aaPredicted RBP18.53■□□□□ 0.56
NEDD4-202ENST00000435532 SETDB2Q96T68 719 aa18.53■□□□□ 0.56
NEDD4-202ENST00000435532 CEP170Q5SW79 1584 aa18.53■□□□□ 0.56
NEDD4-202ENST00000435532 CHD1LQ86WJ1 897 aa18.52■□□□□ 0.56
NEDD4-202ENST00000435532 AEBP1Q8IUX7 1158 aa18.52■□□□□ 0.56
NEDD4-202ENST00000435532 ACSBG1Q96GR2 724 aa18.52■□□□□ 0.56
NEDD4-202ENST00000435532 MKNK2Q9HBH9 465 aa18.52■□□□□ 0.56
NEDD4-202ENST00000435532 MAP4K4O95819 1239 aaPredicted RBP18.52■□□□□ 0.56
NEDD4-202ENST00000435532 CCDC152Q4G0S7 254 aa18.52■□□□□ 0.56
NEDD4-202ENST00000435532 KCNA6P17658 529 aa18.52■□□□□ 0.56
NEDD4-202ENST00000435532 TNIP1Q15025 636 aa18.52■□□□□ 0.56
NEDD4-202ENST00000435532 SDF4Q9BRK5 362 aa18.52■□□□□ 0.55
NEDD4-202ENST00000435532 OFD1O75665 1012 aa18.51■□□□□ 0.55
NEDD4-202ENST00000435532 NYXQ9GZU5 481 aa18.51■□□□□ 0.55
NEDD4-202ENST00000435532 NEO1Q92859 1461 aa18.51■□□□□ 0.55
NEDD4-202ENST00000435532 PIK3R4Q99570 1358 aa18.51■□□□□ 0.55
NEDD4-202ENST00000435532 GLRX3O76003 335 aaKnown RBP18.51■□□□□ 0.55
NEDD4-202ENST00000435532 EIF2AK4Q9P2K8 1649 aaKnown RBP18.51■□□□□ 0.55
NEDD4-202ENST00000435532 STK38Q15208 465 aa18.51■□□□□ 0.55
NEDD4-202ENST00000435532 AKAP4Q5JQC9 854 aa18.51■□□□□ 0.55
NEDD4-202ENST00000435532 PUS7Q96PZ0 661 aaKnown RBP18.51■□□□□ 0.55
NEDD4-202ENST00000435532 PARP3Q9Y6F1 533 aa18.5■□□□□ 0.55
NEDD4-202ENST00000435532 BLOC1S2Q6QNY1 142 aa18.5■□□□□ 0.55
NEDD4-202ENST00000435532 IL1RAPL2Q9NP60 686 aa18.5■□□□□ 0.55
NEDD4-202ENST00000435532 MAGEC2Q9UBF1 373 aaPredicted RBP18.5■□□□□ 0.55
NEDD4-202ENST00000435532 SEC63Q9UGP8 760 aaKnown RBP18.5■□□□□ 0.55
NEDD4-202ENST00000435532 HDAC9Q9UKV0 1011 aa18.49■□□□□ 0.55
NEDD4-202ENST00000435532 TTF1Q15361 905 aaPredicted RBP18.49■□□□□ 0.55
NEDD4-202ENST00000435532 GSTO1P78417 241 aa18.49■□□□□ 0.55
NEDD4-202ENST00000435532 MAP3K2Q9Y2U5 619 aa18.49■□□□□ 0.55
NEDD4-202ENST00000435532 ZFYVE16Q7Z3T8 1539 aa18.48■□□□□ 0.55
NEDD4-202ENST00000435532 ZNF444Q8N0Y2 327 aaPredicted RBP18.48■□□□□ 0.55
NEDD4-202ENST00000435532 ZSCAN31Q96LW9 406 aaPredicted RBP18.48■□□□□ 0.55
NEDD4-202ENST00000435532 U3KPZ7 1027 aaPredicted RBP18.48■□□□□ 0.55
NEDD4-202ENST00000435532 TMEM57Q8N5G2 664 aa18.48■□□□□ 0.55
NEDD4-202ENST00000435532 KINO60870 393 aaKnown RBP18.48■□□□□ 0.55
NEDD4-202ENST00000435532 LETM1O95202 739 aaPredicted RBP18.48■□□□□ 0.55
NEDD4-202ENST00000435532 BAG3O95817 575 aa18.48■□□□□ 0.55
NEDD4-202ENST00000435532 TFCP2L1Q9NZI6 479 aa18.48■□□□□ 0.55
NEDD4-202ENST00000435532 RTCBQ9Y3I0 505 aaKnown RBP18.48■□□□□ 0.55
NEDD4-202ENST00000435532 EHMT1Q9H9B1 1298 aa18.47■□□□□ 0.55
NEDD4-202ENST00000435532 ABCC1P33527 1531 aa18.47■□□□□ 0.55
NEDD4-202ENST00000435532 NAPBQ9H115 298 aa18.47■□□□□ 0.55
NEDD4-202ENST00000435532 C16orf71Q8IYS4 520 aaPredicted RBP18.47■□□□□ 0.55
NEDD4-202ENST00000435532 BMP2KQ9NSY1 1161 aaPredicted RBP18.47■□□□□ 0.55
NEDD4-202ENST00000435532 STK32BQ9NY57 414 aa18.47■□□□□ 0.55
NEDD4-202ENST00000435532 ATP7AQ04656 1500 aa18.47■□□□□ 0.55
NEDD4-202ENST00000435532 FLIIQ13045 1269 aa18.46■□□□□ 0.55
NEDD4-202ENST00000435532 RNF41Q9H4P4 317 aaPredicted RBP18.46■□□□□ 0.55
NEDD4-202ENST00000435532 PCDH11XQ9BZA7 1347 aa18.46■□□□□ 0.55
NEDD4-202ENST00000435532 PCDH11YQ9BZA8 1340 aa18.46■□□□□ 0.55
NEDD4-202ENST00000435532 DEKP35659 375 aaKnown RBP18.46■□□□□ 0.55
NEDD4-202ENST00000435532 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
NEDD4-202ENST00000435532 FLT4P35916 1363 aa18.46■□□□□ 0.55
NEDD4-202ENST00000435532 ABCA5Q8WWZ7 1642 aa18.46■□□□□ 0.55
NEDD4-202ENST00000435532 SYCP1Q15431 976 aa18.46■□□□□ 0.55
NEDD4-202ENST00000435532 TCOF1Q13428 1488 aaKnown RBP18.46■□□□□ 0.55
NEDD4-202ENST00000435532 RALGAPBQ86X10 1494 aa18.46■□□□□ 0.54
NEDD4-202ENST00000435532 HLA-DOAP06340 250 aa18.46■□□□□ 0.54
NEDD4-202ENST00000435532 NUTM1Q86Y26 1132 aa18.46■□□□□ 0.54
NEDD4-202ENST00000435532 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.46■□□□□ 0.545e-8■■■■■ 137
NEDD4-202ENST00000435532 NAP1L1P55209 391 aaKnown RBP18.45■□□□□ 0.54
NEDD4-202ENST00000435532 STIM1Q13586 685 aa18.45■□□□□ 0.54
NEDD4-202ENST00000435532 IL16Q14005 1332 aa18.45■□□□□ 0.54
NEDD4-202ENST00000435532 LDHAL6AQ6ZMR3 332 aa18.45■□□□□ 0.54
NEDD4-202ENST00000435532 RDXP35241 583 aaKnown RBP18.45■□□□□ 0.54
NEDD4-202ENST00000435532 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
NEDD4-202ENST00000435532 FANCIQ9NVI1 1328 aa18.45■□□□□ 0.54
NEDD4-202ENST00000435532 CABP5Q9NP86 173 aa18.45■□□□□ 0.54
NEDD4-202ENST00000435532 PDRG1Q9NUG6 133 aa18.45■□□□□ 0.54
NEDD4-202ENST00000435532 FAM13BQ9NYF5 915 aa18.45■□□□□ 0.54
NEDD4-202ENST00000435532 FILIP1LQ4L180 1135 aa18.44■□□□□ 0.54
NEDD4-202ENST00000435532 CUL5Q93034 780 aa18.44■□□□□ 0.54
NEDD4-202ENST00000435532 ANKRD18AQ8IVF6 992 aa18.44■□□□□ 0.54
NEDD4-202ENST00000435532 MINDY4BA8MYZ0 360 aa18.44■□□□□ 0.54
NEDD4-202ENST00000435532 CABLES1Q8TDN4 633 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms