RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 ANO2Q9NQ90 1003 aa14.97□□□□□ -0.01
CLDN4-203ENST00000435050 FOXD4L5Q5VV16 416 aaPredicted RBP14.97□□□□□ -0.01
CLDN4-203ENST00000435050 INTS3Q68E01 1043 aaKnown RBP14.97□□□□□ -0.01
CLDN4-203ENST00000435050 NUTM1Q86Y26 1132 aa14.97□□□□□ -0.01
CLDN4-203ENST00000435050 FOXD4L4Q8WXT5 416 aaPredicted RBP14.97□□□□□ -0.01
CLDN4-203ENST00000435050 LRRCC1Q9C099 1032 aa14.97□□□□□ -0.01
CLDN4-203ENST00000435050 RTN4Q9NQC3 1192 aaKnown RBP14.97□□□□□ -0.01
CLDN4-203ENST00000435050 NEXNQ0ZGT2 675 aa14.97□□□□□ -0.01
CLDN4-203ENST00000435050 DDX58O95786 925 aaKnown RBP14.96□□□□□ -0.01
CLDN4-203ENST00000435050 SIRT2Q8IXJ6 389 aa14.96□□□□□ -0.01
CLDN4-203ENST00000435050 CABP4P57796 275 aa14.96□□□□□ -0.01
CLDN4-203ENST00000435050 SPG7Q9UQ90 795 aa14.96□□□□□ -0.01
CLDN4-203ENST00000435050 JARID2Q92833 1246 aaPredicted RBP14.96□□□□□ -0.01
CLDN4-203ENST00000435050 SIL1Q9H173 461 aa14.96□□□□□ -0.01
CLDN4-203ENST00000435050 USP19O94966 1318 aa14.96□□□□□ -0.01
CLDN4-203ENST00000435050 BMP2KLQ5H9B9 411 aa14.95□□□□□ -0.02
CLDN4-203ENST00000435050 AKAP4Q5JQC9 854 aa14.95□□□□□ -0.02
CLDN4-203ENST00000435050 HTATSF1O43719 755 aaKnown RBP14.95□□□□□ -0.02
CLDN4-203ENST00000435050 PTCD1O75127 700 aaKnown RBP14.95□□□□□ -0.02
CLDN4-203ENST00000435050 DNAAF4Q8WXU2 420 aa14.95□□□□□ -0.02
CLDN4-203ENST00000435050 DCTPP1Q9H773 170 aa14.95□□□□□ -0.02
CLDN4-203ENST00000435050 TMEM94Q12767 1356 aa14.94□□□□□ -0.02
CLDN4-203ENST00000435050 MCCP23508 829 aa14.94□□□□□ -0.02
CLDN4-203ENST00000435050 NFATC2IPQ8NCF5 419 aa14.94□□□□□ -0.02
CLDN4-203ENST00000435050 USP31Q70CQ4 1352 aa14.93□□□□□ -0.02
CLDN4-203ENST00000435050 KIAA1211Q6ZU35 1233 aa14.93□□□□□ -0.02
CLDN4-203ENST00000435050 AXIN2Q9Y2T1 843 aa14.93□□□□□ -0.02
CLDN4-203ENST00000435050 MAP3K2Q9Y2U5 619 aa14.93□□□□□ -0.02
CLDN4-203ENST00000435050 RNMTO43148 476 aaKnown RBP14.93□□□□□ -0.02
CLDN4-203ENST00000435050 RBM42Q9BTD8 480 aaKnown RBP14.93□□□□□ -0.02
CLDN4-203ENST00000435050 PTCH1Q13635 1447 aa14.93□□□□□ -0.02
CLDN4-203ENST00000435050 NPHP3Q7Z494 1330 aa14.93□□□□□ -0.02
CLDN4-203ENST00000435050 DIP2AQ14689 1571 aa14.93□□□□□ -0.02
CLDN4-203ENST00000435050 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
CLDN4-203ENST00000435050 PPP1R42Q7Z4L9 355 aa14.92□□□□□ -0.02
CLDN4-203ENST00000435050 ARHGEF25Q86VW2 580 aa14.92□□□□□ -0.02
CLDN4-203ENST00000435050 DBF4Q9UBU7 674 aaPredicted RBP14.92□□□□□ -0.02
CLDN4-203ENST00000435050 REC8O95072 547 aa14.92□□□□□ -0.02
CLDN4-203ENST00000435050 PLEKHM2Q8IWE5 1019 aa14.92□□□□□ -0.02
CLDN4-203ENST00000435050 KIF20BQ96Q89 1820 aa14.92□□□□□ -0.02
CLDN4-203ENST00000435050 IFIT2P09913 472 aaKnown RBP14.92□□□□□ -0.02
CLDN4-203ENST00000435050 KIAA0232Q92628 1395 aa14.92□□□□□ -0.02
CLDN4-203ENST00000435050 PNMA6EA0A0J9YXQ4 647 aa14.91□□□□□ -0.02
CLDN4-203ENST00000435050 CWF19L2Q2TBE0 894 aaKnown RBP14.91□□□□□ -0.02
CLDN4-203ENST00000435050 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
CLDN4-203ENST00000435050 SDSP20132 328 aa14.91□□□□□ -0.02
CLDN4-203ENST00000435050 BRPF1P55201 1214 aaPredicted RBP14.91□□□□□ -0.02
CLDN4-203ENST00000435050 G3BP1Q13283 466 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLDN4-203ENST00000435050 FOXD4L6Q3SYB3 417 aaPredicted RBP14.91□□□□□ -0.02
CLDN4-203ENST00000435050 TTC22Q5TAA0 569 aa14.91□□□□□ -0.02
CLDN4-203ENST00000435050 FOXD4L3Q6VB84 417 aaPredicted RBP14.91□□□□□ -0.02
CLDN4-203ENST00000435050 FER1L4A9Z1Z3 1794 aa14.9□□□□□ -0.02
CLDN4-203ENST00000435050 CHMP5Q9NZZ3 219 aa14.9□□□□□ -0.02
CLDN4-203ENST00000435050 NRXN3Q9Y4C0 1643 aa14.9□□□□□ -0.02
CLDN4-203ENST00000435050 GOLGA6L22H0YM25 854 aa14.9□□□□□ -0.02
CLDN4-203ENST00000435050 EIF4A1P60842 406 aaKnown RBP14.9□□□□□ -0.02
CLDN4-203ENST00000435050 ANKARQ7Z5J8 1434 aa14.9□□□□□ -0.02
CLDN4-203ENST00000435050 RIMS1Q86UR5 1692 aaKnown RBP14.9□□□□□ -0.02
CLDN4-203ENST00000435050 MX1P20591 662 aa14.9□□□□□ -0.02
CLDN4-203ENST00000435050 GSE1Q14687 1217 aa14.9□□□□□ -0.02
CLDN4-203ENST00000435050 ST18O60284 1047 aa14.89□□□□□ -0.03
CLDN4-203ENST00000435050 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.89□□□□□ -0.03
CLDN4-203ENST00000435050 IFNL2Q8IZJ0 200 aa14.89□□□□□ -0.03
CLDN4-203ENST00000435050 CLASRPQ8N2M8 674 aaKnown RBP14.89□□□□□ -0.03
CLDN4-203ENST00000435050 HDAC5Q9UQL6 1122 aa14.89□□□□□ -0.03
CLDN4-203ENST00000435050 MYD88Q99836 296 aa14.88□□□□□ -0.03
CLDN4-203ENST00000435050 GPATCH3Q96I76 525 aa14.88□□□□□ -0.03
CLDN4-203ENST00000435050 RTL1A6NKG5 1358 aa14.88□□□□□ -0.03
CLDN4-203ENST00000435050 ADGRB2O60241 1585 aa14.88□□□□□ -0.03
CLDN4-203ENST00000435050 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
CLDN4-203ENST00000435050 ATP5J2-PTCD1G3V325 749 aa14.88□□□□□ -0.03
CLDN4-203ENST00000435050 NBPF7P0C2Y1 421 aaPredicted RBP14.88□□□□□ -0.03
CLDN4-203ENST00000435050 DIAPH3Q9NSV4 1193 aa14.88□□□□□ -0.03
CLDN4-203ENST00000435050 ADGRL3Q9HAR2 1447 aa14.88□□□□□ -0.03
CLDN4-203ENST00000435050 ITSN1Q15811 1721 aa14.88□□□□□ -0.03
CLDN4-203ENST00000435050 KAT6BQ8WYB5 2073 aa14.87□□□□□ -0.03
CLDN4-203ENST00000435050 TAOK2Q9UL54 1235 aa14.87□□□□□ -0.03
CLDN4-203ENST00000435050 PDE1AP54750 535 aa14.87□□□□□ -0.03
CLDN4-203ENST00000435050 PA2G4Q9UQ80 394 aaKnown RBP14.87□□□□□ -0.03
CLDN4-203ENST00000435050 C3P01024 1663 aa14.87□□□□□ -0.03
CLDN4-203ENST00000435050 ERC2O15083 957 aa14.86□□□□□ -0.03
CLDN4-203ENST00000435050 NEK4P51957 841 aa14.86□□□□□ -0.03
CLDN4-203ENST00000435050 ARHGAP23Q9P227 1491 aa14.86□□□□□ -0.03
CLDN4-203ENST00000435050 GSPT1P15170 499 aaKnown RBP14.86□□□□□ -0.03
CLDN4-203ENST00000435050 ATP8B2P98198 1209 aa14.86□□□□□ -0.03
CLDN4-203ENST00000435050 PROSER3Q2NL68 480 aa14.86□□□□□ -0.03
CLDN4-203ENST00000435050 COPS6Q7L5N1 327 aa14.86□□□□□ -0.03
CLDN4-203ENST00000435050 XAGE3Q8WTP9 111 aa14.85□□□□□ -0.03
CLDN4-203ENST00000435050 GBP4Q96PP9 640 aa14.85□□□□□ -0.03
CLDN4-203ENST00000435050 CCDC85AQ96PX6 553 aaPredicted RBP14.85□□□□□ -0.03
CLDN4-203ENST00000435050 USP44Q9H0E7 712 aa14.85□□□□□ -0.03
CLDN4-203ENST00000435050 DNAJC5Q9H3Z4 198 aa14.85□□□□□ -0.03
CLDN4-203ENST00000435050 SLIT1O75093 1534 aa14.85□□□□□ -0.03
CLDN4-203ENST00000435050 CRB1P82279 1406 aa14.85□□□□□ -0.03
CLDN4-203ENST00000435050 HSP90AB4PQ58FF6 505 aa14.85□□□□□ -0.03
CLDN4-203ENST00000435050 NUTM2BA6NNL0 878 aaPredicted RBP14.85□□□□□ -0.03
CLDN4-203ENST00000435050 NUTM2EB1AL46 878 aaPredicted RBP14.85□□□□□ -0.03
CLDN4-203ENST00000435050 AACSQ86V21 672 aa14.85□□□□□ -0.03
CLDN4-203ENST00000435050 NUTM2AQ8IVF1 878 aaPredicted RBP14.85□□□□□ -0.03
CLDN4-203ENST00000435050 TAF7LQ5H9L4 462 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms