RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 TEFQ10587 303 aa28.23■■■□□ 2.11
TOP3B-205ENST00000434517 NEUROD2Q15784 382 aa28.23■■■□□ 2.11
TOP3B-205ENST00000434517 EZH2Q15910 746 aaKnown RBP28.23■■■□□ 2.11
TOP3B-205ENST00000434517 MCM10Q7L590 875 aa28.23■■■□□ 2.11
TOP3B-205ENST00000434517 IL17REQ8NFR9 667 aa28.23■■■□□ 2.11
TOP3B-205ENST00000434517 RRP7AQ9Y3A4 280 aaKnown RBP28.23■■■□□ 2.11
TOP3B-205ENST00000434517 CAMKK2Q96RR4 588 aa28.22■■■□□ 2.11
TOP3B-205ENST00000434517 DCTN1Q14203 1278 aa28.21■■■□□ 2.11
TOP3B-205ENST00000434517 LMOD3Q0VAK6 560 aa28.2■■■□□ 2.1
TOP3B-205ENST00000434517 SMARCC1Q92922 1105 aaPredicted RBP28.2■■■□□ 2.1
TOP3B-205ENST00000434517 CEMIPQ8WUJ3 1361 aa28.2■■■□□ 2.1
TOP3B-205ENST00000434517 RREB1Q92766 1687 aa28.19■■■□□ 2.1
TOP3B-205ENST00000434517 LY75O60449 1722 aa28.19■■■□□ 2.1
TOP3B-205ENST00000434517 APAF1O14727 1248 aa28.19■■■□□ 2.1
TOP3B-205ENST00000434517 PALLDQ8WX93 1383 aa28.19■■■□□ 2.1
TOP3B-205ENST00000434517 SIPA1L3O60292 1781 aaPredicted RBP28.19■■■□□ 2.1
TOP3B-205ENST00000434517 R3HDM1Q15032 1099 aaKnown RBP28.18■■■□□ 2.1
TOP3B-205ENST00000434517 ASAP1Q9ULH1 1129 aa28.18■■■□□ 2.1
TOP3B-205ENST00000434517 ATG3Q9NT62 314 aa28.17■■■□□ 2.1
TOP3B-205ENST00000434517 YY1P25490 414 aa28.16■■■□□ 2.1
TOP3B-205ENST00000434517 TXNRD1Q16881 649 aa28.16■■■□□ 2.1
TOP3B-205ENST00000434517 NUP188Q5SRE5 1749 aa28.15■■■□□ 2.1
TOP3B-205ENST00000434517 THUMPD2Q9BTF0 503 aaKnown RBP28.13■■■□□ 2.09
TOP3B-205ENST00000434517 PAPPAQ13219 1627 aa28.13■■■□□ 2.09
TOP3B-205ENST00000434517 SENP3-EIF4A1A0A087X0R7 540 aa28.12■■■□□ 2.09
TOP3B-205ENST00000434517 PROM2Q8N271 834 aa28.12■■■□□ 2.09
TOP3B-205ENST00000434517 CCNL1Q9UK58 526 aaPredicted RBP28.12■■■□□ 2.09
TOP3B-205ENST00000434517 SLC27A3Q5K4L6 730 aa28.11■■■□□ 2.09
TOP3B-205ENST00000434517 BTBD11A6QL63 1104 aa28.1■■■□□ 2.09
TOP3B-205ENST00000434517 SLC39A6Q13433 755 aa28.1■■■□□ 2.09
TOP3B-205ENST00000434517 TTC5Q8N0Z6 440 aa28.1■■■□□ 2.09
TOP3B-205ENST00000434517 RBM42Q9BTD8 480 aaKnown RBP28.1■■■□□ 2.09
TOP3B-205ENST00000434517 TRIM35Q9UPQ4 493 aa28.1■■■□□ 2.09
TOP3B-205ENST00000434517 KCNQ4P56696 695 aa28.08■■■□□ 2.09
TOP3B-205ENST00000434517 TAF7Q15545 349 aaPredicted RBP28.08■■■□□ 2.09
TOP3B-205ENST00000434517 LOC102724428A0A0B4J2F2 783 aa28.07■■■□□ 2.08
TOP3B-205ENST00000434517 PTCD1O75127 700 aaKnown RBP28.07■■■□□ 2.08
TOP3B-205ENST00000434517 SIK1P57059 783 aa28.07■■■□□ 2.08
TOP3B-205ENST00000434517 LRRC4BQ9NT99 713 aa28.06■■■□□ 2.08
TOP3B-205ENST00000434517 UBR2Q8IWV8 1755 aa28.06■■■□□ 2.08
TOP3B-205ENST00000434517 C5P01031 1676 aa28.05■■■□□ 2.08
TOP3B-205ENST00000434517 TAF1LQ8IZX4 1826 aa28.04■■■□□ 2.08
TOP3B-205ENST00000434517 ATP6V1AP38606 617 aa28.04■■■□□ 2.08
TOP3B-205ENST00000434517 NBPF14Q5TI25 921 aa28.04■■■□□ 2.08
TOP3B-205ENST00000434517 ZNF790Q6PG37 636 aa28.04■■■□□ 2.08
TOP3B-205ENST00000434517 SALL2Q9Y467 1007 aaPredicted RBP28.04■■■□□ 2.08
TOP3B-205ENST00000434517 KCPQ6ZWJ8 1503 aa28.03■■■□□ 2.08
TOP3B-205ENST00000434517 ZNF831Q5JPB2 1677 aa28.03■■■□□ 2.08
TOP3B-205ENST00000434517 KDM3BQ7LBC6 1761 aa28.02■■■□□ 2.08
TOP3B-205ENST00000434517 MIS18AQ9NYP9 233 aa28.02■■■□□ 2.08
TOP3B-205ENST00000434517 HMGB2P26583 209 aaKnown RBP28.01■■■□□ 2.07
TOP3B-205ENST00000434517 CALD1Q05682 793 aaKnown RBP28■■■□□ 2.07
TOP3B-205ENST00000434517 CCDC27Q2M243 656 aa28■■■□□ 2.07
TOP3B-205ENST00000434517 LAS1LQ9Y4W2 734 aaKnown RBP28■■■□□ 2.07
TOP3B-205ENST00000434517 KCNQ3O43525 872 aa27.99■■■□□ 2.07
TOP3B-205ENST00000434517 NCBP3Q53F19 620 aaKnown RBP27.99■■■□□ 2.07
TOP3B-205ENST00000434517 SLC4A9Q96Q91 983 aa27.99■■■□□ 2.07
TOP3B-205ENST00000434517 STK32BQ9NY57 414 aa27.99■■■□□ 2.07
TOP3B-205ENST00000434517 TSPYL4Q9UJ04 414 aa27.99■■■□□ 2.07
TOP3B-205ENST00000434517 TJP1Q07157 1748 aa27.98■■■□□ 2.07
TOP3B-205ENST00000434517 ITPK1Q13572 414 aa27.98■■■□□ 2.07
TOP3B-205ENST00000434517 ZNF496Q96IT1 587 aaPredicted RBP27.98■■■□□ 2.07
TOP3B-205ENST00000434517 FMNL2Q96PY5 1086 aa27.98■■■□□ 2.07
TOP3B-205ENST00000434517 WWC1Q8IX03 1113 aa27.97■■■□□ 2.07
TOP3B-205ENST00000434517 ANO8Q9HCE9 1232 aaPredicted RBP27.97■■■□□ 2.07
TOP3B-205ENST00000434517 C4BP0C0L5 1744 aa27.97■■■□□ 2.07
TOP3B-205ENST00000434517 COL5A3P25940 1745 aaPredicted RBP27.96■■■□□ 2.07
TOP3B-205ENST00000434517 NGEFQ8N5V2 710 aa27.96■■■□□ 2.07
TOP3B-205ENST00000434517 BABAM1Q9NWV8 329 aa27.96■■■□□ 2.07
TOP3B-205ENST00000434517 CICQ96RK0 1608 aaPredicted RBP27.96■■■□□ 2.07
TOP3B-205ENST00000434517 VSIG10Q8N0Z9 540 aa27.95■■■□□ 2.06
TOP3B-205ENST00000434517 LINC00116Q8NCU8 138 aa27.95■■■□□ 2.06
TOP3B-205ENST00000434517 HEG1Q9ULI3 1381 aa27.95■■■□□ 2.06
TOP3B-205ENST00000434517 DCAF8L1A6NGE4 600 aa27.93■■■□□ 2.06
TOP3B-205ENST00000434517 SLC15A2Q16348 729 aa27.93■■■□□ 2.06
TOP3B-205ENST00000434517 ZNF827Q17R98 1081 aa27.93■■■□□ 2.06
TOP3B-205ENST00000434517 DNAJC10Q8IXB1 793 aa27.93■■■□□ 2.06
TOP3B-205ENST00000434517 AK7Q96M32 723 aa27.92■■■□□ 2.06
TOP3B-205ENST00000434517 CFAP44Q96MT7 982 aa27.92■■■□□ 2.06
TOP3B-205ENST00000434517 CHL1O00533 1208 aa27.91■■■□□ 2.06
TOP3B-205ENST00000434517 GNAI1P63096 354 aa27.91■■■□□ 2.06
TOP3B-205ENST00000434517 AKT1S1Q96B36 256 aa27.91■■■□□ 2.06
TOP3B-205ENST00000434517 IFT57Q9NWB7 429 aa27.91■■■□□ 2.06
TOP3B-205ENST00000434517 TUBGCP6Q96RT7 1819 aa27.9■■■□□ 2.06
TOP3B-205ENST00000434517 TFCP2L1Q9NZI6 479 aa27.9■■■□□ 2.06
TOP3B-205ENST00000434517 EIF4A1P60842 406 aaKnown RBP27.89■■■□□ 2.06
TOP3B-205ENST00000434517 TEX13AQ9BXU3 409 aaPredicted RBP27.89■■■□□ 2.06
TOP3B-205ENST00000434517 SNRPA1P09661 255 aaKnown RBP27.88■■■□□ 2.05
TOP3B-205ENST00000434517 WDR63Q8IWG1 891 aa27.88■■■□□ 2.05
TOP3B-205ENST00000434517 QSER1Q2KHR3 1735 aa27.87■■■□□ 2.05
TOP3B-205ENST00000434517 STARD3NLO95772 234 aa27.87■■■□□ 2.05
TOP3B-205ENST00000434517 MBIPQ9NS73 344 aa27.87■■■□□ 2.05
TOP3B-205ENST00000434517 IL16Q14005 1332 aa27.87■■■□□ 2.05
TOP3B-205ENST00000434517 CNTNAP4Q9C0A0 1308 aa27.87■■■□□ 2.05
TOP3B-205ENST00000434517 ZNF853P0CG23 659 aa27.86■■■□□ 2.05
TOP3B-205ENST00000434517 CRKLP46109 303 aaKnown RBP27.86■■■□□ 2.05
TOP3B-205ENST00000434517 SPON1Q9HCB6 807 aa27.86■■■□□ 2.05
TOP3B-205ENST00000434517 UBR3Q6ZT12 1888 aa27.86■■■□□ 2.05
TOP3B-205ENST00000434517 MYH14Q7Z406 1995 aaKnown RBP27.86■■■□□ 2.05
TOP3B-205ENST00000434517 LAMB4A4D0S4 1761 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms