RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 NFATC2IPQ8NCF5 419 aa24.44■■□□□ 1.5
HLA-F-220ENST00000434407 SLC52A2Q9HAB3 445 aa24.44■■□□□ 1.5
HLA-F-220ENST00000434407 PNNQ9H307 717 aaKnown RBP24.43■■□□□ 1.5
HLA-F-220ENST00000434407 CCNL1Q9UK58 526 aaPredicted RBP24.43■■□□□ 1.5
HLA-F-220ENST00000434407 ZNF831Q5JPB2 1677 aa24.43■■□□□ 1.5
HLA-F-220ENST00000434407 SIPA1L3O60292 1781 aaPredicted RBP24.42■■□□□ 1.5
HLA-F-220ENST00000434407 IL17REQ8NFR9 667 aa24.42■■□□□ 1.5
HLA-F-220ENST00000434407 CEMIPQ8WUJ3 1361 aa24.42■■□□□ 1.5
HLA-F-220ENST00000434407 C5P01031 1676 aa24.41■■□□□ 1.5
HLA-F-220ENST00000434407 ANP32CO43423 234 aa24.41■■□□□ 1.5
HLA-F-220ENST00000434407 KCNQ4P56696 695 aa24.41■■□□□ 1.5
HLA-F-220ENST00000434407 SLC15A2Q16348 729 aa24.41■■□□□ 1.5
HLA-F-220ENST00000434407 AKT1S1Q96B36 256 aa24.41■■□□□ 1.5
HLA-F-220ENST00000434407 QSER1Q2KHR3 1735 aa24.41■■□□□ 1.5
HLA-F-220ENST00000434407 LOC102724428A0A0B4J2F2 783 aa24.4■■□□□ 1.5
HLA-F-220ENST00000434407 SIK1P57059 783 aa24.4■■□□□ 1.5
HLA-F-220ENST00000434407 STK32BQ9NY57 414 aa24.4■■□□□ 1.5
HLA-F-220ENST00000434407 HMGB2P26583 209 aaKnown RBP24.39■■□□□ 1.49
HLA-F-220ENST00000434407 TUBGCP6Q96RT7 1819 aa24.38■■□□□ 1.49
HLA-F-220ENST00000434407 HTATSF1O43719 755 aaKnown RBP24.38■■□□□ 1.49
HLA-F-220ENST00000434407 ZNF827Q17R98 1081 aa24.38■■□□□ 1.49
HLA-F-220ENST00000434407 CASZ1Q86V15 1759 aa24.38■■□□□ 1.49
HLA-F-220ENST00000434407 NEFMP07197 916 aa24.37■■□□□ 1.49
HLA-F-220ENST00000434407 WDR43Q15061 677 aaKnown RBP eCLIP24.36■■□□□ 1.49
HLA-F-220ENST00000434407 NFE2L2Q16236 605 aa24.36■■□□□ 1.49
HLA-F-220ENST00000434407 SLC4A9Q96Q91 983 aa24.36■■□□□ 1.49
HLA-F-220ENST00000434407 ADAMTS8Q9UP79 889 aa24.36■■□□□ 1.49
HLA-F-220ENST00000434407 CCDC184Q52MB2 194 aa24.35■■□□□ 1.49
HLA-F-220ENST00000434407 CICQ96RK0 1608 aaPredicted RBP24.35■■□□□ 1.49
HLA-F-220ENST00000434407 UBR2Q8IWV8 1755 aa24.34■■□□□ 1.49
HLA-F-220ENST00000434407 C4BP0C0L5 1744 aa24.34■■□□□ 1.49
HLA-F-220ENST00000434407 MAPK8IP3Q9UPT6 1336 aa24.34■■□□□ 1.49
HLA-F-220ENST00000434407 ITPK1Q13572 414 aa24.33■■□□□ 1.49
HLA-F-220ENST00000434407 COL5A3P25940 1745 aaPredicted RBP24.32■■□□□ 1.48
HLA-F-220ENST00000434407 TEFQ10587 303 aa24.32■■□□□ 1.48
HLA-F-220ENST00000434407 RTF1Q92541 710 aaKnown RBP24.32■■□□□ 1.48
HLA-F-220ENST00000434407 ATP6V1AP38606 617 aa24.31■■□□□ 1.48
HLA-F-220ENST00000434407 UBR3Q6ZT12 1888 aa24.31■■□□□ 1.48
HLA-F-220ENST00000434407 MCM10Q7L590 875 aa24.31■■□□□ 1.48
HLA-F-220ENST00000434407 LINC00116Q8NCU8 138 aa24.31■■□□□ 1.48
HLA-F-220ENST00000434407 LRP5O75197 1615 aa24.31■■□□□ 1.48
HLA-F-220ENST00000434407 KCPQ6ZWJ8 1503 aa24.3■■□□□ 1.48
HLA-F-220ENST00000434407 SLC39A6Q13433 755 aa24.3■■□□□ 1.48
HLA-F-220ENST00000434407 RUNDC1Q96C34 613 aa24.3■■□□□ 1.48
HLA-F-220ENST00000434407 RBM42Q9BTD8 480 aaKnown RBP24.3■■□□□ 1.48
HLA-F-220ENST00000434407 PDGFDQ9GZP0 370 aaPredicted RBP24.3■■□□□ 1.48
HLA-F-220ENST00000434407 MYH14Q7Z406 1995 aaKnown RBP24.3■■□□□ 1.48
HLA-F-220ENST00000434407 DCTN1Q14203 1278 aa24.29■■□□□ 1.48
HLA-F-220ENST00000434407 TJP1Q07157 1748 aa24.29■■□□□ 1.48
HLA-F-220ENST00000434407 PTCD1O75127 700 aaKnown RBP24.28■■□□□ 1.48
HLA-F-220ENST00000434407 TMPOP42166 694 aaKnown RBP24.28■■□□□ 1.48
HLA-F-220ENST00000434407 CCDC146Q8IYE0 955 aa24.28■■□□□ 1.48
HLA-F-220ENST00000434407 TFCP2L1Q9NZI6 479 aa24.28■■□□□ 1.48
HLA-F-220ENST00000434407 PNPLA7Q6ZV29 1317 aa24.28■■□□□ 1.48
HLA-F-220ENST00000434407 PNISRQ8TF01 805 aaKnown RBP24.27■■□□□ 1.48
HLA-F-220ENST00000434407 ZNF790Q6PG37 636 aa24.26■■□□□ 1.47
HLA-F-220ENST00000434407 RIPK4P57078 832 aa24.25■■□□□ 1.47
HLA-F-220ENST00000434407 RC3H1Q5TC82 1133 aaKnown RBP24.25■■□□□ 1.47
HLA-F-220ENST00000434407 VSIG10Q8N0Z9 540 aa24.25■■□□□ 1.47
HLA-F-220ENST00000434407 MRS2Q9HD23 443 aa24.25■■□□□ 1.47
HLA-F-220ENST00000434407 BTBD11A6QL63 1104 aa24.23■■□□□ 1.47
HLA-F-220ENST00000434407 TAF7Q15545 349 aaPredicted RBP24.23■■□□□ 1.47
HLA-F-220ENST00000434407 AK7Q96M32 723 aa24.23■■□□□ 1.47
HLA-F-220ENST00000434407 CNTNAP4Q9C0A0 1308 aa24.23■■□□□ 1.47
HLA-F-220ENST00000434407 COL24A1Q17RW2 1714 aa24.23■■□□□ 1.47
HLA-F-220ENST00000434407 AMIGO3Q86WK7 504 aa24.22■■□□□ 1.47
HLA-F-220ENST00000434407 TTC5Q8N0Z6 440 aa24.22■■□□□ 1.47
HLA-F-220ENST00000434407 FLAD1Q8NFF5 587 aa24.22■■□□□ 1.47
HLA-F-220ENST00000434407 SLC16A10Q8TF71 515 aa24.22■■□□□ 1.47
HLA-F-220ENST00000434407 COL23A1Q86Y22 540 aaPredicted RBP24.21■■□□□ 1.47
HLA-F-220ENST00000434407 ZNF496Q96IT1 587 aaPredicted RBP24.21■■□□□ 1.47
HLA-F-220ENST00000434407 KCNQ3O43525 872 aa24.2■■□□□ 1.46
HLA-F-220ENST00000434407 LMOD3Q0VAK6 560 aa24.2■■□□□ 1.46
HLA-F-220ENST00000434407 THUMPD2Q9BTF0 503 aaKnown RBP24.2■■□□□ 1.46
HLA-F-220ENST00000434407 MTFR1LQ9H019 292 aa24.2■■□□□ 1.46
HLA-F-220ENST00000434407 SPON1Q9HCB6 807 aa24.2■■□□□ 1.46
HLA-F-220ENST00000434407 KDM3BQ7LBC6 1761 aa24.2■■□□□ 1.46
HLA-F-220ENST00000434407 HEG1Q9ULI3 1381 aa24.19■■□□□ 1.46
HLA-F-220ENST00000434407 SSFA2P28290 1259 aa24.19■■□□□ 1.46
HLA-F-220ENST00000434407 DNAJC10Q8IXB1 793 aa24.19■■□□□ 1.46
HLA-F-220ENST00000434407 TRIM35Q9UPQ4 493 aa24.19■■□□□ 1.46
HLA-F-220ENST00000434407 RRP7AQ9Y3A4 280 aaKnown RBP24.19■■□□□ 1.46
HLA-F-220ENST00000434407 ZBTB7AO95365 584 aa24.18■■□□□ 1.46
HLA-F-220ENST00000434407 CRKLP46109 303 aaKnown RBP24.18■■□□□ 1.46
HLA-F-220ENST00000434407 FMNL2Q96PY5 1086 aa24.18■■□□□ 1.46
HLA-F-220ENST00000434407 GNPATO15228 680 aa24.17■■□□□ 1.46
HLA-F-220ENST00000434407 CYP19A1P11511 503 aaPredicted RBP24.17■■□□□ 1.46
HLA-F-220ENST00000434407 SGIP1Q9BQI5 828 aa24.17■■□□□ 1.46
HLA-F-220ENST00000434407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.16■■□□□ 1.46
HLA-F-220ENST00000434407 APAF1O14727 1248 aa24.16■■□□□ 1.46
HLA-F-220ENST00000434407 RPS6KA4O75676 772 aa24.16■■□□□ 1.46
HLA-F-220ENST00000434407 PTGER2P43116 358 aa24.16■■□□□ 1.46
HLA-F-220ENST00000434407 INTS5Q6P9B9 1019 aaKnown RBP24.16■■□□□ 1.46
HLA-F-220ENST00000434407 NEUROD2Q15784 382 aa24.15■■□□□ 1.46
HLA-F-220ENST00000434407 SMIM5Q71RC9 77 aa24.14■■□□□ 1.45
HLA-F-220ENST00000434407 TEX13AQ9BXU3 409 aaPredicted RBP24.14■■□□□ 1.45
HLA-F-220ENST00000434407 BABAM1Q9NWV8 329 aa24.14■■□□□ 1.45
HLA-F-220ENST00000434407 MIS18AQ9NYP9 233 aa24.14■■□□□ 1.45
HLA-F-220ENST00000434407 ATF5Q9Y2D1 282 aaPredicted RBP24.14■■□□□ 1.45
HLA-F-220ENST00000434407 RTCBQ9Y3I0 505 aaKnown RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms