RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 NHSQ6T4R5 1651 aa20.07■□□□□ 0.8
CNOT9-205ENST00000433439 CCDC27Q2M243 656 aa20.06■□□□□ 0.8
CNOT9-205ENST00000433439 BCL11BQ9C0K0 894 aaPredicted RBP20.06■□□□□ 0.8
CNOT9-205ENST00000433439 ADAMTS7Q9UKP4 1686 aa20.06■□□□□ 0.8
CNOT9-205ENST00000433439 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
CNOT9-205ENST00000433439 NGEFQ8N5V2 710 aa20.05■□□□□ 0.8
CNOT9-205ENST00000433439 BTBD11A6QL63 1104 aa20.04■□□□□ 0.8
CNOT9-205ENST00000433439 CALD1Q05682 793 aaKnown RBP20.04■□□□□ 0.8
CNOT9-205ENST00000433439 SLC39A6Q13433 755 aa20.04■□□□□ 0.8
CNOT9-205ENST00000433439 SF3B2Q13435 895 aaKnown RBP20.04■□□□□ 0.8
CNOT9-205ENST00000433439 APBA3O96018 575 aa20.03■□□□□ 0.8
CNOT9-205ENST00000433439 ASAP1Q9ULH1 1129 aa20.03■□□□□ 0.8
CNOT9-205ENST00000433439 MRC1P22897 1456 aa20.03■□□□□ 0.8
CNOT9-205ENST00000433439 BTAF1O14981 1849 aa20.02■□□□□ 0.8
CNOT9-205ENST00000433439 NCBP3Q53F19 620 aaKnown RBP20.02■□□□□ 0.8
CNOT9-205ENST00000433439 TSPYL4Q9UJ04 414 aa20.02■□□□□ 0.8
CNOT9-205ENST00000433439 TTC5Q8N0Z6 440 aa20.01■□□□□ 0.79
CNOT9-205ENST00000433439 KCNQ3O43525 872 aa20■□□□□ 0.79
CNOT9-205ENST00000433439 WDR63Q8IWG1 891 aa20■□□□□ 0.79
CNOT9-205ENST00000433439 ATG3Q9NT62 314 aa20■□□□□ 0.79
CNOT9-205ENST00000433439 SIPA1L3O60292 1781 aaPredicted RBP20■□□□□ 0.79
CNOT9-205ENST00000433439 PTCD1O75127 700 aaKnown RBP19.99■□□□□ 0.79
CNOT9-205ENST00000433439 GNAI1P63096 354 aa19.99■□□□□ 0.79
CNOT9-205ENST00000433439 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
CNOT9-205ENST00000433439 GOLGA2Q08379 1002 aa19.98■□□□□ 0.79
CNOT9-205ENST00000433439 SMARCC1Q92922 1105 aaPredicted RBP19.98■□□□□ 0.79
CNOT9-205ENST00000433439 CFAP44Q96MT7 982 aa19.98■□□□□ 0.79
CNOT9-205ENST00000433439 IFT57Q9NWB7 429 aa19.98■□□□□ 0.79
CNOT9-205ENST00000433439 PALLDQ8WX93 1383 aa19.97■□□□□ 0.79
CNOT9-205ENST00000433439 TNS1Q9HBL0 1735 aaKnown RBP19.97■□□□□ 0.79
CNOT9-205ENST00000433439 ZNF790Q6PG37 636 aa19.97■□□□□ 0.79
CNOT9-205ENST00000433439 TSR2Q969E8 191 aaKnown RBP19.97■□□□□ 0.79
CNOT9-205ENST00000433439 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
CNOT9-205ENST00000433439 CHL1O00533 1208 aa19.96■□□□□ 0.79
CNOT9-205ENST00000433439 BAG6P46379 1132 aa19.96■□□□□ 0.79
CNOT9-205ENST00000433439 CDCA7LQ96GN5 454 aa19.96■□□□□ 0.79
CNOT9-205ENST00000433439 SPINK5Q9NQ38 1064 aaPredicted RBP19.96■□□□□ 0.79
CNOT9-205ENST00000433439 MBIPQ9NS73 344 aa19.96■□□□□ 0.79
CNOT9-205ENST00000433439 IL16Q14005 1332 aa19.96■□□□□ 0.79
CNOT9-205ENST00000433439 ZBED9Q6R2W3 1325 aa19.96■□□□□ 0.79
CNOT9-205ENST00000433439 KCNQ4P56696 695 aa19.95■□□□□ 0.78
CNOT9-205ENST00000433439 EN1Q05925 392 aaPredicted RBP19.95■□□□□ 0.78
CNOT9-205ENST00000433439 DEFB132Q7Z7B7 95 aa19.95■□□□□ 0.78
CNOT9-205ENST00000433439 CCDC125Q86Z20 511 aa19.95■□□□□ 0.78
CNOT9-205ENST00000433439 ZNF853P0CG23 659 aa19.94■□□□□ 0.78
CNOT9-205ENST00000433439 ZNF496Q96IT1 587 aaPredicted RBP19.93■□□□□ 0.78
CNOT9-205ENST00000433439 FMNL2Q96PY5 1086 aa19.93■□□□□ 0.78
CNOT9-205ENST00000433439 MYH16Q9H6N6 1097 aa19.93■□□□□ 0.78
CNOT9-205ENST00000433439 BABAM1Q9NWV8 329 aa19.93■□□□□ 0.78
CNOT9-205ENST00000433439 LRP5O75197 1615 aa19.93■□□□□ 0.78
CNOT9-205ENST00000433439 PAPPAQ13219 1627 aa19.93■□□□□ 0.78
CNOT9-205ENST00000433439 KDM3BQ7LBC6 1761 aa19.93■□□□□ 0.78
CNOT9-205ENST00000433439 LOC102724428A0A0B4J2F2 783 aa19.92■□□□□ 0.78
CNOT9-205ENST00000433439 SIK1P57059 783 aa19.92■□□□□ 0.78
CNOT9-205ENST00000433439 CCNL1Q9UK58 526 aaPredicted RBP19.92■□□□□ 0.78
CNOT9-205ENST00000433439 E9PSI1 815 aa19.91■□□□□ 0.78
CNOT9-205ENST00000433439 ATP6V1AP38606 617 aa19.91■□□□□ 0.78
CNOT9-205ENST00000433439 EIF4A1P60842 406 aaKnown RBP19.91■□□□□ 0.78
CNOT9-205ENST00000433439 EZH2Q15910 746 aaKnown RBP19.91■□□□□ 0.78
CNOT9-205ENST00000433439 KRT24Q2M2I5 525 aa19.91■□□□□ 0.78
CNOT9-205ENST00000433439 FANCIQ9NVI1 1328 aa19.91■□□□□ 0.78
CNOT9-205ENST00000433439 ELL2O00472 640 aaPredicted RBP19.9■□□□□ 0.78
CNOT9-205ENST00000433439 PLSCR1O15162 318 aa19.9■□□□□ 0.78
CNOT9-205ENST00000433439 SLFN5Q08AF3 891 aa19.9■□□□□ 0.78
CNOT9-205ENST00000433439 TXNRD1Q16881 649 aa19.9■□□□□ 0.78
CNOT9-205ENST00000433439 KCPQ6ZWJ8 1503 aa19.9■□□□□ 0.78
CNOT9-205ENST00000433439 SLC4A9Q96Q91 983 aa19.89■□□□□ 0.77
CNOT9-205ENST00000433439 HEG1Q9ULI3 1381 aa19.89■□□□□ 0.77
CNOT9-205ENST00000433439 EP400Q96L91 3159 aa19.89■□□□□ 0.77
CNOT9-205ENST00000433439 PRAMEF22A3QJZ6 481 aa19.88■□□□□ 0.77
CNOT9-205ENST00000433439 UBR2Q8IWV8 1755 aa19.88■□□□□ 0.77
CNOT9-205ENST00000433439 LY75O60449 1722 aa19.88■□□□□ 0.77
CNOT9-205ENST00000433439 EXOSC9Q06265 439 aaKnown RBP19.87■□□□□ 0.77
CNOT9-205ENST00000433439 DNAJC10Q8IXB1 793 aa19.87■□□□□ 0.77
CNOT9-205ENST00000433439 CAMKK2Q96RR4 588 aa19.87■□□□□ 0.77
CNOT9-205ENST00000433439 SNRPA1P09661 255 aaKnown RBP19.86■□□□□ 0.77
CNOT9-205ENST00000433439 ITPK1Q13572 414 aa19.86■□□□□ 0.77
CNOT9-205ENST00000433439 PROM2Q8N271 834 aa19.86■□□□□ 0.77
CNOT9-205ENST00000433439 C8orf58Q8NAV2 365 aa19.86■□□□□ 0.77
CNOT9-205ENST00000433439 LRRC4BQ9NT99 713 aa19.86■□□□□ 0.77
CNOT9-205ENST00000433439 GIGYF1O75420 1035 aaPredicted RBP19.85■□□□□ 0.77
CNOT9-205ENST00000433439 EIF2S2P20042 333 aaKnown RBP19.85■□□□□ 0.77
CNOT9-205ENST00000433439 SLC27A3Q5K4L6 730 aa19.85■□□□□ 0.77
CNOT9-205ENST00000433439 DUSP27Q5VZP5 1158 aa19.85■□□□□ 0.77
CNOT9-205ENST00000433439 NECTIN2Q92692 538 aa19.85■□□□□ 0.77
CNOT9-205ENST00000433439 TSPYL6Q8N831 410 aa19.84■□□□□ 0.77
CNOT9-205ENST00000433439 USP16Q9Y5T5 823 aa19.84■□□□□ 0.77
CNOT9-205ENST00000433439 VSIG10Q8N0Z9 540 aa19.83■□□□□ 0.77
CNOT9-205ENST00000433439 LINC00116Q8NCU8 138 aa19.83■□□□□ 0.77
CNOT9-205ENST00000433439 TJP1Q07157 1748 aa19.82■□□□□ 0.76
CNOT9-205ENST00000433439 C5P01031 1676 aa19.82■□□□□ 0.76
CNOT9-205ENST00000433439 TWISTNBQ3B726 338 aaPredicted RBP19.82■□□□□ 0.76
CNOT9-205ENST00000433439 RGPD3A6NKT7 1758 aaPredicted RBP19.81■□□□□ 0.76
CNOT9-205ENST00000433439 RGPD4Q7Z3J3 1758 aa19.81■□□□□ 0.76
CNOT9-205ENST00000433439 STARD3NLO95772 234 aa19.81■□□□□ 0.76
CNOT9-205ENST00000433439 TRMT2AQ8IZ69 625 aaKnown RBP19.81■□□□□ 0.76
CNOT9-205ENST00000433439 TEX13AQ9BXU3 409 aaPredicted RBP19.81■□□□□ 0.76
CNOT9-205ENST00000433439 TCERG1O14776 1098 aaKnown RBP19.8■□□□□ 0.76
CNOT9-205ENST00000433439 PIP4K2AP48426 406 aaPredicted RBP19.8■□□□□ 0.76
CNOT9-205ENST00000433439 A1BGP04217 495 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms