RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
SMPD4-206ENST00000433118 HAP1P54257 671 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-206ENST00000433118 IL17REQ8NFR9 667 aa12.99□□□□□ -0.33
SMPD4-206ENST00000433118 PRKCSHP14314 528 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-206ENST00000433118 INTS3Q68E01 1043 aaKnown RBP12.99□□□□□ -0.33
SMPD4-206ENST00000433118 KIF24Q5T7B8 1368 aa12.99□□□□□ -0.33
SMPD4-206ENST00000433118 RABEP1Q15276 862 aa12.98□□□□□ -0.33
SMPD4-206ENST00000433118 GAS2L3Q86XJ1 694 aa12.98□□□□□ -0.33
SMPD4-206ENST00000433118 ANKRD44Q8N8A2 993 aa12.98□□□□□ -0.33
SMPD4-206ENST00000433118 AK9Q5TCS8 1911 aa12.98□□□□□ -0.33
SMPD4-206ENST00000433118 SLC4A10Q6U841 1118 aa12.98□□□□□ -0.33
SMPD4-206ENST00000433118 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
SMPD4-206ENST00000433118 TRIM44Q96DX7 344 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-206ENST00000433118 KDRP35968 1356 aa12.98□□□□□ -0.33
SMPD4-206ENST00000433118 OTUD7AQ8TE49 926 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-206ENST00000433118 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
SMPD4-206ENST00000433118 F6X3S4 739 aa12.97□□□□□ -0.33
SMPD4-206ENST00000433118 CLCN1P35523 988 aa12.97□□□□□ -0.33
SMPD4-206ENST00000433118 CHRNA2Q15822 529 aa12.97□□□□□ -0.33
SMPD4-206ENST00000433118 CASC1Q6TDU7 716 aa12.97□□□□□ -0.33
SMPD4-206ENST00000433118 G2E3Q7L622 706 aa12.97□□□□□ -0.33
SMPD4-206ENST00000433118 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-206ENST00000433118 NAP1L5Q96NT1 182 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-206ENST00000433118 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
SMPD4-206ENST00000433118 SMARCA5O60264 1052 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-206ENST00000433118 MPRIPQ6WCQ1 1025 aa12.97□□□□□ -0.33
SMPD4-206ENST00000433118 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
SMPD4-206ENST00000433118 MSH6P52701 1360 aa12.97□□□□□ -0.33
SMPD4-206ENST00000433118 CEP85Q6P2H3 762 aa12.96□□□□□ -0.33
SMPD4-206ENST00000433118 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.33
SMPD4-206ENST00000433118 ARHGEF25Q86VW2 580 aa12.96□□□□□ -0.33
SMPD4-206ENST00000433118 DDX49Q9Y6V7 483 aaKnown RBP12.96□□□□□ -0.33
SMPD4-206ENST00000433118 CRB1P82279 1406 aa12.96□□□□□ -0.33
SMPD4-206ENST00000433118 ATP10DQ9P241 1426 aa12.96□□□□□ -0.33
SMPD4-206ENST00000433118 MEIS3Q99687 375 aa12.95□□□□□ -0.34
SMPD4-206ENST00000433118 USP26Q9BXU7 913 aa12.95□□□□□ -0.34
SMPD4-206ENST00000433118 BAG4O95429 457 aaKnown RBP12.95□□□□□ -0.34
SMPD4-206ENST00000433118 SDSP20132 328 aa12.95□□□□□ -0.34
SMPD4-206ENST00000433118 EIF2S2P20042 333 aaKnown RBP12.95□□□□□ -0.34
SMPD4-206ENST00000433118 ZNF530Q6P9A1 599 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-206ENST00000433118 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
SMPD4-206ENST00000433118 ESPNB1AK53 854 aa12.94□□□□□ -0.34
SMPD4-206ENST00000433118 RGS12O14924 1447 aa12.94□□□□□ -0.34
SMPD4-206ENST00000433118 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
SMPD4-206ENST00000433118 PTPRCP08575 1304 aa12.94□□□□□ -0.34
SMPD4-206ENST00000433118 ZNF335Q9H4Z2 1342 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-206ENST00000433118 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
SMPD4-206ENST00000433118 MARF1Q9Y4F3 1742 aaKnown RBP12.94□□□□□ -0.34
SMPD4-206ENST00000433118 KCNQ3O43525 872 aa12.93□□□□□ -0.34
SMPD4-206ENST00000433118 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
SMPD4-206ENST00000433118 ST18O60284 1047 aa12.93□□□□□ -0.34
SMPD4-206ENST00000433118 CSB-PGBD3P0DP91 1061 aa12.93□□□□□ -0.34
SMPD4-206ENST00000433118 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
SMPD4-206ENST00000433118 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
SMPD4-206ENST00000433118 NUCB2P80303 420 aa12.93□□□□□ -0.34
SMPD4-206ENST00000433118 KLHL40Q2TBA0 621 aa12.93□□□□□ -0.34
SMPD4-206ENST00000433118 KIAA0232Q92628 1395 aa12.93□□□□□ -0.34
SMPD4-206ENST00000433118 HMMRO75330 724 aa12.92□□□□□ -0.34
SMPD4-206ENST00000433118 REC8O95072 547 aa12.92□□□□□ -0.34
SMPD4-206ENST00000433118 TAF7Q15545 349 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-206ENST00000433118 CLEC17AQ6ZS10 378 aa12.92□□□□□ -0.34
SMPD4-206ENST00000433118 CADPS2Q86UW7 1296 aa12.92□□□□□ -0.34
SMPD4-206ENST00000433118 LTN1O94822 1766 aa12.92□□□□□ -0.34
SMPD4-206ENST00000433118 ANXA1P04083 346 aa12.91□□□□□ -0.34
SMPD4-206ENST00000433118 ANP32BQ92688 251 aaKnown RBP12.91□□□□□ -0.34
SMPD4-206ENST00000433118 ERBB4Q15303 1308 aa12.91□□□□□ -0.34
SMPD4-206ENST00000433118 NWD1Q149M9 1564 aa12.91□□□□□ -0.34
SMPD4-206ENST00000433118 NASPP49321 788 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-206ENST00000433118 NFAT5O94916 1531 aa12.91□□□□□ -0.34
SMPD4-206ENST00000433118 TEFQ10587 303 aa12.91□□□□□ -0.34
SMPD4-206ENST00000433118 FKBP5Q13451 457 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-206ENST00000433118 STK31Q9BXU1 1019 aa12.91□□□□□ -0.34
SMPD4-206ENST00000433118 PKP1Q13835 747 aa12.9□□□□□ -0.34
SMPD4-206ENST00000433118 MST1RQ04912 1400 aa12.9□□□□□ -0.34
SMPD4-206ENST00000433118 ERC2O15083 957 aa12.89□□□□□ -0.35
SMPD4-206ENST00000433118 C1orf141Q5JVX7 400 aa12.89□□□□□ -0.35
SMPD4-206ENST00000433118 CAVIN1Q6NZI2 390 aaKnown RBP12.89□□□□□ -0.35
SMPD4-206ENST00000433118 ZGPATQ8N5A5 531 aaKnown RBP12.89□□□□□ -0.35
SMPD4-206ENST00000433118 STRCP1A6NGW2 1772 aa12.89□□□□□ -0.35
SMPD4-206ENST00000433118 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
SMPD4-206ENST00000433118 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
SMPD4-206ENST00000433118 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-206ENST00000433118 HDGFL1Q5TGJ6 251 aa12.88□□□□□ -0.35
SMPD4-206ENST00000433118 CWC22Q9HCG8 908 aaKnown RBP12.88□□□□□ -0.35
SMPD4-206ENST00000433118 PHAXQ9H814 394 aaKnown RBP12.88□□□□□ -0.35
SMPD4-206ENST00000433118 NPHP3Q7Z494 1330 aa12.88□□□□□ -0.35
SMPD4-206ENST00000433118 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
SMPD4-206ENST00000433118 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
SMPD4-206ENST00000433118 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
SMPD4-206ENST00000433118 PDE1AP54750 535 aa12.87□□□□□ -0.35
SMPD4-206ENST00000433118 FLIIQ13045 1269 aa12.87□□□□□ -0.35
SMPD4-206ENST00000433118 BRINP3Q76B58 766 aa12.87□□□□□ -0.35
SMPD4-206ENST00000433118 IBTKQ9P2D0 1353 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-206ENST00000433118 ERBB3P21860 1342 aa12.87□□□□□ -0.35
SMPD4-206ENST00000433118 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
SMPD4-206ENST00000433118 CYP2E1P05181 493 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-206ENST00000433118 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
SMPD4-206ENST00000433118 CCDC30Q5VVM6 783 aa12.87□□□□□ -0.35
SMPD4-206ENST00000433118 TSHZ3Q63HK5 1081 aa12.87□□□□□ -0.35
SMPD4-206ENST00000433118 LMBRD1Q9NUN5 540 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms