RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 FAM200BP0CF97 657 aa12.92□□□□□ -0.34
CCDC171-202ENST00000432954 PRPHP41219 470 aa12.92□□□□□ -0.34
CCDC171-202ENST00000432954 C17orf50Q8WW18 174 aa12.92□□□□□ -0.34
CCDC171-202ENST00000432954 TRIM6Q9C030 488 aaPredicted RBP12.92□□□□□ -0.34
CCDC171-202ENST00000432954 SMTNL1A8MU46 457 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 IPO5O00410 1097 aaKnown RBP12.91□□□□□ -0.34
CCDC171-202ENST00000432954 TPM4P67936 248 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 CCDC15Q0P6D6 951 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 IFT88Q13099 833 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 LSM14AQ8ND56 463 aaKnown RBP12.91□□□□□ -0.34
CCDC171-202ENST00000432954 GIMAP7Q8NHV1 300 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 KCNB2Q92953 911 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 SNX21Q969T3 373 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 FMNL2Q96PY5 1086 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 SLC24A3Q9HC58 644 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 IVLP07476 585 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 GCFC2P16383 781 aaKnown RBP12.91□□□□□ -0.34
CCDC171-202ENST00000432954 CRYMQ14894 314 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 CCDC178Q5BJE1 867 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 PRPF38AQ8NAV1 312 aaKnown RBP12.91□□□□□ -0.34
CCDC171-202ENST00000432954 ARMC2Q8NEN0 867 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 PLEKHG4BQ96PX9 1271 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 CRBNQ96SW2 442 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 ZSCAN16Q9H4T2 348 aaPredicted RBP12.91□□□□□ -0.34
CCDC171-202ENST00000432954 UTP6Q9NYH9 597 aaKnown RBP12.91□□□□□ -0.34
CCDC171-202ENST00000432954 PSD3Q9NYI0 1048 aa12.91□□□□□ -0.34
CCDC171-202ENST00000432954 MAP3K1Q13233 1512 aa12.9□□□□□ -0.34
CCDC171-202ENST00000432954 ELF1P32519 619 aa12.9□□□□□ -0.34
CCDC171-202ENST00000432954 TDRD7Q8NHU6 1098 aaKnown RBP12.9□□□□□ -0.34
CCDC171-202ENST00000432954 EVI5LQ96CN4 794 aa12.9□□□□□ -0.34
CCDC171-202ENST00000432954 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
CCDC171-202ENST00000432954 CORO7P57737 925 aa12.9□□□□□ -0.34
CCDC171-202ENST00000432954 ZSCAN23Q3MJ62 389 aa12.9□□□□□ -0.34
CCDC171-202ENST00000432954 KMT5BQ4FZB7 885 aa12.9□□□□□ -0.34
CCDC171-202ENST00000432954 HHATQ5VTY9 493 aa12.9□□□□□ -0.34
CCDC171-202ENST00000432954 MYLK4Q86YV6 388 aaPredicted RBP12.9□□□□□ -0.34
CCDC171-202ENST00000432954 DNAAF4Q8WXU2 420 aa12.9□□□□□ -0.34
CCDC171-202ENST00000432954 ST7Q9NRC1 585 aa12.9□□□□□ -0.34
CCDC171-202ENST00000432954 PDE3BQ13370 1112 aa12.89□□□□□ -0.35
CCDC171-202ENST00000432954 RNF214Q8ND24 703 aa12.89□□□□□ -0.35
CCDC171-202ENST00000432954 BAG1Q99933 345 aaPredicted RBP12.89□□□□□ -0.35
CCDC171-202ENST00000432954 SEC24BO95487 1268 aa12.88□□□□□ -0.35
CCDC171-202ENST00000432954 TSNAXIP1Q2TAA8 658 aa12.88□□□□□ -0.35
CCDC171-202ENST00000432954 AKAP2Q9Y2D5 859 aa12.88□□□□□ -0.35
CCDC171-202ENST00000432954 PTPRCP08575 1304 aa12.88□□□□□ -0.35
CCDC171-202ENST00000432954 EIF3CLB5ME19 914 aaKnown RBP12.88□□□□□ -0.35
CCDC171-202ENST00000432954 EIF3CQ99613 913 aaKnown RBP12.88□□□□□ -0.35
CCDC171-202ENST00000432954 EXOC5O00471 708 aa12.87□□□□□ -0.35
CCDC171-202ENST00000432954 PECAM1P16284 738 aaPredicted RBP12.87□□□□□ -0.35
CCDC171-202ENST00000432954 NEDD9Q14511 834 aa12.87□□□□□ -0.35
CCDC171-202ENST00000432954 ZRSR1Q15695 479 aaKnown RBP12.87□□□□□ -0.35
CCDC171-202ENST00000432954 KCNV1Q6PIU1 500 aa12.87□□□□□ -0.35
CCDC171-202ENST00000432954 SMC5Q8IY18 1101 aa12.87□□□□□ -0.35
CCDC171-202ENST00000432954 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
CCDC171-202ENST00000432954 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
CCDC171-202ENST00000432954 ZSCAN9O15535 394 aaPredicted RBP12.87□□□□□ -0.35
CCDC171-202ENST00000432954 BAG4O95429 457 aaKnown RBP12.87□□□□□ -0.35
CCDC171-202ENST00000432954 MAPK8IP3Q9UPT6 1336 aa12.87□□□□□ -0.35
CCDC171-202ENST00000432954 RDXP35241 583 aaKnown RBP12.86□□□□□ -0.35
CCDC171-202ENST00000432954 PSMC1P62191 440 aaKnown RBP12.86□□□□□ -0.35
CCDC171-202ENST00000432954 PHC3Q8NDX5 983 aa12.86□□□□□ -0.35
CCDC171-202ENST00000432954 LMCD1Q9NZU5 365 aa12.86□□□□□ -0.35
CCDC171-202ENST00000432954 AP1G2O75843 785 aa12.86□□□□□ -0.35
CCDC171-202ENST00000432954 PRIM1P49642 420 aaKnown RBP12.86□□□□□ -0.35
CCDC171-202ENST00000432954 LONRF3Q496Y0 759 aa12.86□□□□□ -0.35
CCDC171-202ENST00000432954 RNF20Q5VTR2 975 aa12.86□□□□□ -0.35
CCDC171-202ENST00000432954 SMCR8Q8TEV9 937 aaPredicted RBP12.86□□□□□ -0.35
CCDC171-202ENST00000432954 RAB3GAP2Q9H2M9 1393 aa12.86□□□□□ -0.35
CCDC171-202ENST00000432954 POLR1AO95602 1720 aaPredicted RBP12.85□□□□□ -0.35
CCDC171-202ENST00000432954 RTN2O75298 545 aa12.85□□□□□ -0.35
CCDC171-202ENST00000432954 CCNHP51946 323 aaPredicted RBP12.85□□□□□ -0.35
CCDC171-202ENST00000432954 GORABQ5T7V8 394 aa12.85□□□□□ -0.35
CCDC171-202ENST00000432954 LRSAM1Q6UWE0 723 aa12.85□□□□□ -0.35
CCDC171-202ENST00000432954 GBP6Q6ZN66 633 aa12.85□□□□□ -0.35
CCDC171-202ENST00000432954 IQCF2Q8IXL9 164 aa12.85□□□□□ -0.35
CCDC171-202ENST00000432954 KIAA1524Q8TCG1 905 aa12.85□□□□□ -0.35
CCDC171-202ENST00000432954 YIPF2Q9BWQ6 316 aa12.85□□□□□ -0.35
CCDC171-202ENST00000432954 RPS6KA5O75582 802 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
CCDC171-202ENST00000432954 C16orf87Q6PH81 154 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 TRPC1P48995 793 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 MNAT1P51948 309 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 WDR78Q5VTH9 848 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 SAMD3Q8N6K7 520 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 CCDC34Q96HJ3 373 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 AK7Q96M32 723 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 POLR3CQ9BUI4 534 aaPredicted RBP12.84□□□□□ -0.35
CCDC171-202ENST00000432954 IRX2Q9BZI1 471 aaPredicted RBP12.84□□□□□ -0.35
CCDC171-202ENST00000432954 IRF2BPLQ9H1B7 796 aa12.84□□□□□ -0.35
CCDC171-202ENST00000432954 RWDD1Q9H446 243 aaPredicted RBP12.84□□□□□ -0.35
CCDC171-202ENST00000432954 RTEL1-TNFRSF6BF6WH68 1400 aa12.83□□□□□ -0.35
CCDC171-202ENST00000432954 FILIP1LQ4L180 1135 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 SMARCE1Q969G3 411 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 HTATSF1O43719 755 aaKnown RBP12.83□□□□□ -0.36
CCDC171-202ENST00000432954 FCHSD2O94868 740 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 ACTN2P35609 894 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms