RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 LOC102724428A0A0B4J2F2 783 aa23.09■■□□□ 1.29
CTDSP1-203ENST00000431127 SIK1P57059 783 aa23.09■■□□□ 1.29
CTDSP1-203ENST00000431127 AKT1S1Q96B36 256 aa23.09■■□□□ 1.29
CTDSP1-203ENST00000431127 PAPPAQ13219 1627 aa23.08■■□□□ 1.29
CTDSP1-203ENST00000431127 SCN11AQ9UI33 1791 aa23.06■■□□□ 1.28
CTDSP1-203ENST00000431127 ZNF827Q17R98 1081 aa23.06■■□□□ 1.28
CTDSP1-203ENST00000431127 RTF1Q92541 710 aaKnown RBP23.05■■□□□ 1.28
CTDSP1-203ENST00000431127 PLEKHF1Q96S99 279 aa23.05■■□□□ 1.28
CTDSP1-203ENST00000431127 TFCP2L1Q9NZI6 479 aa23.05■■□□□ 1.28
CTDSP1-203ENST00000431127 MRC1P22897 1456 aa23.05■■□□□ 1.28
CTDSP1-203ENST00000431127 ANP32CO43423 234 aa23.04■■□□□ 1.28
CTDSP1-203ENST00000431127 HTATSF1O43719 755 aaKnown RBP23.04■■□□□ 1.28
CTDSP1-203ENST00000431127 ZBTB7AO95365 584 aa23.04■■□□□ 1.28
CTDSP1-203ENST00000431127 ATP6V1AP38606 617 aa23.04■■□□□ 1.28
CTDSP1-203ENST00000431127 TEFQ10587 303 aa23.04■■□□□ 1.28
CTDSP1-203ENST00000431127 WDR43Q15061 677 aaKnown RBP eCLIP23.04■■□□□ 1.28
CTDSP1-203ENST00000431127 IL17REQ8NFR9 667 aa23.04■■□□□ 1.28
CTDSP1-203ENST00000431127 MAPK8IP3Q9UPT6 1336 aa23.04■■□□□ 1.28
CTDSP1-203ENST00000431127 ADAMTS7Q9UKP4 1686 aa23.03■■□□□ 1.28
CTDSP1-203ENST00000431127 RBM42Q9BTD8 480 aaKnown RBP23.03■■□□□ 1.28
CTDSP1-203ENST00000431127 ATF5Q9Y2D1 282 aaPredicted RBP23.02■■□□□ 1.28
CTDSP1-203ENST00000431127 PTGER2P43116 358 aa23.01■■□□□ 1.27
CTDSP1-203ENST00000431127 CEMIPQ8WUJ3 1361 aa23.01■■□□□ 1.27
CTDSP1-203ENST00000431127 PTCD1O75127 700 aaKnown RBP23■■□□□ 1.27
CTDSP1-203ENST00000431127 AK7Q96M32 723 aa23■■□□□ 1.27
CTDSP1-203ENST00000431127 C5P01031 1676 aa23■■□□□ 1.27
CTDSP1-203ENST00000431127 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
CTDSP1-203ENST00000431127 ITPK1Q13572 414 aa22.99■■□□□ 1.27
CTDSP1-203ENST00000431127 NFE2L2Q16236 605 aa22.99■■□□□ 1.27
CTDSP1-203ENST00000431127 FLAD1Q8NFF5 587 aa22.99■■□□□ 1.27
CTDSP1-203ENST00000431127 CASZ1Q86V15 1759 aa22.99■■□□□ 1.27
CTDSP1-203ENST00000431127 LINC00116Q8NCU8 138 aa22.98■■□□□ 1.27
CTDSP1-203ENST00000431127 PNPLA7Q6ZV29 1317 aa22.98■■□□□ 1.27
CTDSP1-203ENST00000431127 SLC16A10Q8TF71 515 aa22.97■■□□□ 1.27
CTDSP1-203ENST00000431127 SLC4A9Q96Q91 983 aa22.97■■□□□ 1.27
CTDSP1-203ENST00000431127 MTFR1LQ9H019 292 aa22.97■■□□□ 1.27
CTDSP1-203ENST00000431127 ZNF831Q5JPB2 1677 aa22.97■■□□□ 1.27
CTDSP1-203ENST00000431127 SLC39A6Q13433 755 aa22.96■■□□□ 1.27
CTDSP1-203ENST00000431127 MCM10Q7L590 875 aa22.96■■□□□ 1.27
CTDSP1-203ENST00000431127 TTC5Q8N0Z6 440 aa22.96■■□□□ 1.27
CTDSP1-203ENST00000431127 TAF1LQ8IZX4 1826 aa22.96■■□□□ 1.27
CTDSP1-203ENST00000431127 C4BP0C0L5 1744 aa22.95■■□□□ 1.26
CTDSP1-203ENST00000431127 ADAMTS8Q9UP79 889 aa22.95■■□□□ 1.26
CTDSP1-203ENST00000431127 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
CTDSP1-203ENST00000431127 QSER1Q2KHR3 1735 aa22.94■■□□□ 1.26
CTDSP1-203ENST00000431127 YY1P25490 414 aa22.94■■□□□ 1.26
CTDSP1-203ENST00000431127 RC3H1Q5TC82 1133 aaKnown RBP22.94■■□□□ 1.26
CTDSP1-203ENST00000431127 ZNF790Q6PG37 636 aa22.94■■□□□ 1.26
CTDSP1-203ENST00000431127 RUNDC1Q96C34 613 aa22.94■■□□□ 1.26
CTDSP1-203ENST00000431127 BTBD11A6QL63 1104 aa22.93■■□□□ 1.26
CTDSP1-203ENST00000431127 VSIG10Q8N0Z9 540 aa22.93■■□□□ 1.26
CTDSP1-203ENST00000431127 SGIP1Q9BQI5 828 aa22.93■■□□□ 1.26
CTDSP1-203ENST00000431127 CNTNAP4Q9C0A0 1308 aa22.92■■□□□ 1.26
CTDSP1-203ENST00000431127 MSH5O43196 834 aa22.92■■□□□ 1.26
CTDSP1-203ENST00000431127 SSFA2P28290 1259 aa22.92■■□□□ 1.26
CTDSP1-203ENST00000431127 DCTN1Q14203 1278 aa22.92■■□□□ 1.26
CTDSP1-203ENST00000431127 COL23A1Q86Y22 540 aaPredicted RBP22.92■■□□□ 1.26
CTDSP1-203ENST00000431127 GNPATO15228 680 aa22.91■■□□□ 1.26
CTDSP1-203ENST00000431127 CCDC146Q8IYE0 955 aa22.91■■□□□ 1.26
CTDSP1-203ENST00000431127 SYT17Q9BSW7 474 aa22.91■■□□□ 1.26
CTDSP1-203ENST00000431127 TMPOP42166 694 aaKnown RBP22.9■■□□□ 1.26
CTDSP1-203ENST00000431127 RIPK4P57078 832 aa22.9■■□□□ 1.26
CTDSP1-203ENST00000431127 LMOD3Q0VAK6 560 aa22.9■■□□□ 1.26
CTDSP1-203ENST00000431127 TAF7Q15545 349 aaPredicted RBP22.9■■□□□ 1.26
CTDSP1-203ENST00000431127 RTCBQ9Y3I0 505 aaKnown RBP22.9■■□□□ 1.26
CTDSP1-203ENST00000431127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.89■■□□□ 1.25
CTDSP1-203ENST00000431127 FHDC1Q9C0D6 1143 aaPredicted RBP22.89■■□□□ 1.25
CTDSP1-203ENST00000431127 KCPQ6ZWJ8 1503 aa22.88■■□□□ 1.25
CTDSP1-203ENST00000431127 PHF14O94880 888 aa22.88■■□□□ 1.25
CTDSP1-203ENST00000431127 PNISRQ8TF01 805 aaKnown RBP22.88■■□□□ 1.25
CTDSP1-203ENST00000431127 ZNF496Q96IT1 587 aaPredicted RBP22.88■■□□□ 1.25
CTDSP1-203ENST00000431127 FMNL2Q96PY5 1086 aa22.88■■□□□ 1.25
CTDSP1-203ENST00000431127 SIPA1L3O60292 1781 aaPredicted RBP22.88■■□□□ 1.25
CTDSP1-203ENST00000431127 TUBGCP6Q96RT7 1819 aa22.87■■□□□ 1.25
CTDSP1-203ENST00000431127 RPS6KA4O75676 772 aa22.87■■□□□ 1.25
CTDSP1-203ENST00000431127 ADRA2BP18089 450 aa22.87■■□□□ 1.25
CTDSP1-203ENST00000431127 CRKLP46109 303 aaKnown RBP22.87■■□□□ 1.25
CTDSP1-203ENST00000431127 DNAJC10Q8IXB1 793 aa22.87■■□□□ 1.25
CTDSP1-203ENST00000431127 TEX13AQ9BXU3 409 aaPredicted RBP22.87■■□□□ 1.25
CTDSP1-203ENST00000431127 MRS2Q9HD23 443 aa22.87■■□□□ 1.25
CTDSP1-203ENST00000431127 CICQ96RK0 1608 aaPredicted RBP22.86■■□□□ 1.25
CTDSP1-203ENST00000431127 CCDC184Q52MB2 194 aa22.86■■□□□ 1.25
CTDSP1-203ENST00000431127 TRAPPC3LQ5T215 181 aa22.86■■□□□ 1.25
CTDSP1-203ENST00000431127 ARXQ96QS3 562 aa22.86■■□□□ 1.25
CTDSP1-203ENST00000431127 COL5A3P25940 1745 aaPredicted RBP22.85■■□□□ 1.25
CTDSP1-203ENST00000431127 STARD3NLO95772 234 aa22.85■■□□□ 1.25
CTDSP1-203ENST00000431127 POLD1P28340 1107 aa22.85■■□□□ 1.25
CTDSP1-203ENST00000431127 AMIGO3Q86WK7 504 aa22.85■■□□□ 1.25
CTDSP1-203ENST00000431127 HEG1Q9ULI3 1381 aa22.85■■□□□ 1.25
CTDSP1-203ENST00000431127 DLG5Q8TDM6 1919 aa22.84■■□□□ 1.25
CTDSP1-203ENST00000431127 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
CTDSP1-203ENST00000431127 UBR3Q6ZT12 1888 aa22.84■■□□□ 1.25
CTDSP1-203ENST00000431127 CYP19A1P11511 503 aaPredicted RBP22.84■■□□□ 1.25
CTDSP1-203ENST00000431127 CCDC87Q9NVE4 849 aa22.84■■□□□ 1.25
CTDSP1-203ENST00000431127 INTS5Q6P9B9 1019 aaKnown RBP22.83■■□□□ 1.25
CTDSP1-203ENST00000431127 THUMPD2Q9BTF0 503 aaKnown RBP22.83■■□□□ 1.25
CTDSP1-203ENST00000431127 RRP7AQ9Y3A4 280 aaKnown RBP22.83■■□□□ 1.25
CTDSP1-203ENST00000431127 TJP1Q07157 1748 aa22.82■■□□□ 1.24
CTDSP1-203ENST00000431127 KCNQ3O43525 872 aa22.82■■□□□ 1.24
CTDSP1-203ENST00000431127 NEUROD2Q15784 382 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms