RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 TRPM1Q7Z4N2 1603 aa11.23□□□□□ -0.61
ECHDC1-207ENST00000430841 ABCC6O95255 1503 aa11.22□□□□□ -0.61
ECHDC1-207ENST00000430841 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
ECHDC1-207ENST00000430841 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
ECHDC1-207ENST00000430841 TTC21AQ8NDW8 1320 aa11.22□□□□□ -0.61
ECHDC1-207ENST00000430841 RGPD5Q99666 1765 aa11.21□□□□□ -0.61
ECHDC1-207ENST00000430841 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
ECHDC1-207ENST00000430841 MAP3K5Q99683 1374 aa11.2□□□□□ -0.62
ECHDC1-207ENST00000430841 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
ECHDC1-207ENST00000430841 KHSRPQ92945 711 aaKnown RBP eCLIP11.2□□□□□ -0.622e-12■■■□□ 17
ECHDC1-207ENST00000430841 KTN1Q86UP2 1357 aaKnown RBP11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 BTAF1O14981 1849 aa11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 COL18A1P39060 1754 aa11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 TTC21BQ7Z4L5 1316 aa11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 IL2RBP14784 551 aa11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 ARHGEF25Q86VW2 580 aa11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 SLC16A10Q8TF71 515 aa11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 SYTL4Q96C24 671 aaPredicted RBP11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 TFCP2L1Q9NZI6 479 aa11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 AXIN2Q9Y2T1 843 aa11.19□□□□□ -0.62
ECHDC1-207ENST00000430841 NBPF1Q3BBV0 1214 aa11.18□□□□□ -0.62
ECHDC1-207ENST00000430841 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
ECHDC1-207ENST00000430841 ZSWIM6Q9HCJ5 1215 aa11.18□□□□□ -0.62
ECHDC1-207ENST00000430841 G3V3G9 751 aa11.17□□□□□ -0.62
ECHDC1-207ENST00000430841 GRIN3BO60391 1043 aa11.17□□□□□ -0.62
ECHDC1-207ENST00000430841 ARSIQ5FYB1 569 aa11.17□□□□□ -0.62
ECHDC1-207ENST00000430841 SLC27A3Q5K4L6 730 aa11.17□□□□□ -0.62
ECHDC1-207ENST00000430841 POTEEQ6S8J3 1075 aa11.16□□□□□ -0.62
ECHDC1-207ENST00000430841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.16□□□□□ -0.625e-7■■■□□ 18.9
ECHDC1-207ENST00000430841 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
ECHDC1-207ENST00000430841 PAPPAQ13219 1627 aa11.16□□□□□ -0.62
ECHDC1-207ENST00000430841 LTN1O94822 1766 aa11.16□□□□□ -0.62
ECHDC1-207ENST00000430841 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
ECHDC1-207ENST00000430841 NFAT5O94916 1531 aa11.15□□□□□ -0.62
ECHDC1-207ENST00000430841 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.62
ECHDC1-207ENST00000430841 ANKRD13DQ6ZTN6 518 aa11.15□□□□□ -0.62
ECHDC1-207ENST00000430841 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
ECHDC1-207ENST00000430841 ZNF827Q17R98 1081 aa11.14□□□□□ -0.63
ECHDC1-207ENST00000430841 DDX54Q8TDD1 881 aaKnown RBP11.14□□□□□ -0.63
ECHDC1-207ENST00000430841 ANKRD24Q8TF21 1146 aa11.14□□□□□ -0.63
ECHDC1-207ENST00000430841 QSER1Q2KHR3 1735 aa11.14□□□□□ -0.63
ECHDC1-207ENST00000430841 FAM208AQ9UK61 1670 aaKnown RBP11.14□□□□□ -0.63
ECHDC1-207ENST00000430841 RIMBP2O15034 1052 aa11.13□□□□□ -0.63
ECHDC1-207ENST00000430841 TMC1Q8TDI8 760 aa11.13□□□□□ -0.63
ECHDC1-207ENST00000430841 GPBP1L1Q9HC44 474 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-207ENST00000430841 MON2Q7Z3U7 1717 aa11.12□□□□□ -0.63
ECHDC1-207ENST00000430841 LTV1Q96GA3 475 aaPredicted RBP11.11□□□□□ -0.63
ECHDC1-207ENST00000430841 CCNL1Q9UK58 526 aaPredicted RBP11.11□□□□□ -0.63
ECHDC1-207ENST00000430841 USP47Q96K76 1375 aa11.11□□□□□ -0.63
ECHDC1-207ENST00000430841 UTRNP46939 3433 aa11.11□□□□□ -0.63
ECHDC1-207ENST00000430841 DOT1LQ8TEK3 1739 aa11.1□□□□□ -0.63
ECHDC1-207ENST00000430841 BBXQ8WY36 941 aaPredicted RBP11.1□□□□□ -0.63
ECHDC1-207ENST00000430841 TERF2IPQ9NYB0 399 aa11.1□□□□□ -0.63
ECHDC1-207ENST00000430841 PNPLA7Q6ZV29 1317 aa11.09□□□□□ -0.63
ECHDC1-207ENST00000430841 ATP10DQ9P241 1426 aa11.09□□□□□ -0.63
ECHDC1-207ENST00000430841 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
ECHDC1-207ENST00000430841 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
ECHDC1-207ENST00000430841 NLGN2Q8NFZ4 835 aa11.09□□□□□ -0.63
ECHDC1-207ENST00000430841 ZNF526Q8TF50 670 aaPredicted RBP11.09□□□□□ -0.63
ECHDC1-207ENST00000430841 SPOCK2Q92563 424 aa11.09□□□□□ -0.63
ECHDC1-207ENST00000430841 LRRC4BQ9NT99 713 aa11.09□□□□□ -0.63
ECHDC1-207ENST00000430841 SMG6Q86US8 1419 aaKnown RBP11.09□□□□□ -0.63
ECHDC1-207ENST00000430841 ANKRD36BQ8N2N9 1353 aa11.08□□□□□ -0.64
ECHDC1-207ENST00000430841 TUBGCP6Q96RT7 1819 aa11.08□□□□□ -0.64
ECHDC1-207ENST00000430841 ZNF316A6NFI3 1004 aaPredicted RBP11.08□□□□□ -0.64
ECHDC1-207ENST00000430841 MSL1Q68DK7 614 aa11.08□□□□□ -0.64
ECHDC1-207ENST00000430841 NME9Q86XW9 330 aa11.08□□□□□ -0.64
ECHDC1-207ENST00000430841 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
ECHDC1-207ENST00000430841 EDC4Q6P2E9 1401 aaKnown RBP11.08□□□□□ -0.64
ECHDC1-207ENST00000430841 USP54Q70EL1 1684 aa11.08□□□□□ -0.64
ECHDC1-207ENST00000430841 USP31Q70CQ4 1352 aa11.07□□□□□ -0.64
ECHDC1-207ENST00000430841 AMPHP49418 695 aa11.07□□□□□ -0.64
ECHDC1-207ENST00000430841 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
ECHDC1-207ENST00000430841 FLAD1Q8NFF5 587 aa11.07□□□□□ -0.64
ECHDC1-207ENST00000430841 NSD3Q9BZ95 1437 aa11.06□□□□□ -0.64
ECHDC1-207ENST00000430841 CEP350Q5VT06 3117 aa11.05□□□□□ -0.64
ECHDC1-207ENST00000430841 LY75O60449 1722 aa11.05□□□□□ -0.64
ECHDC1-207ENST00000430841 HSPA6P17066 643 aa11.05□□□□□ -0.64
ECHDC1-207ENST00000430841 KCNQ4P56696 695 aa11.05□□□□□ -0.64
ECHDC1-207ENST00000430841 ZCRB1Q8TBF4 217 aaKnown RBP11.05□□□□□ -0.64
ECHDC1-207ENST00000430841 RAPGEF4Q8WZA2 1011 aa11.05□□□□□ -0.64
ECHDC1-207ENST00000430841 L3MBTL2Q969R5 705 aa11.05□□□□□ -0.64
ECHDC1-207ENST00000430841 COG3Q96JB2 828 aa11.05□□□□□ -0.64
ECHDC1-207ENST00000430841 AK7Q96M32 723 aa11.05□□□□□ -0.64
ECHDC1-207ENST00000430841 YBX3P16989 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
ECHDC1-207ENST00000430841 NEUROD1Q13562 356 aa11.04□□□□□ -0.64
ECHDC1-207ENST00000430841 IP6K1Q92551 441 aa11.04□□□□□ -0.64
ECHDC1-207ENST00000430841 CD2APQ9Y5K6 639 aa11.04□□□□□ -0.64
ECHDC1-207ENST00000430841 C5P01031 1676 aa11.04□□□□□ -0.64
ECHDC1-207ENST00000430841 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
ECHDC1-207ENST00000430841 CARD11Q9BXL7 1154 aa11.03□□□□□ -0.64
ECHDC1-207ENST00000430841 SBNO2Q9Y2G9 1366 aa11.03□□□□□ -0.64
ECHDC1-207ENST00000430841 ECM2O94769 699 aaPredicted RBP11.02□□□□□ -0.65
ECHDC1-207ENST00000430841 TATP17735 454 aaPredicted RBP11.02□□□□□ -0.65
ECHDC1-207ENST00000430841 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
ECHDC1-207ENST00000430841 CGNL1Q0VF96 1302 aa11.02□□□□□ -0.65
ECHDC1-207ENST00000430841 GOLGB1Q14789 3259 aaKnown RBP11.02□□□□□ -0.65
ECHDC1-207ENST00000430841 COL23A1Q86Y22 540 aaPredicted RBP11.01□□□□□ -0.65
ECHDC1-207ENST00000430841 PCDH11XQ9BZA7 1347 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms