RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 RTCBQ9Y3I0 505 aaKnown RBP20.47■□□□□ 0.87
SMARCA4-203ENST00000429416 FANCIQ9NVI1 1328 aa20.47■□□□□ 0.87
SMARCA4-203ENST00000429416 RPAP2Q8IXW5 612 aaPredicted RBP20.47■□□□□ 0.87
SMARCA4-203ENST00000429416 LDHAL6AQ6ZMR3 332 aa20.47■□□□□ 0.87
SMARCA4-203ENST00000429416 SIRT1Q96EB6 747 aa20.47■□□□□ 0.87
SMARCA4-203ENST00000429416 PI4KAP2A4QPH2 592 aa20.46■□□□□ 0.87
SMARCA4-203ENST00000429416 AKAP4Q5JQC9 854 aa20.46■□□□□ 0.87
SMARCA4-203ENST00000429416 PI4KAP1Q8N8J0 262 aa20.46■□□□□ 0.87
SMARCA4-203ENST00000429416 SLC5A1P13866 664 aa20.46■□□□□ 0.87
SMARCA4-203ENST00000429416 DDX49Q9Y6V7 483 aaKnown RBP20.46■□□□□ 0.87
SMARCA4-203ENST00000429416 BECN2A8MW95 431 aa20.46■□□□□ 0.87
SMARCA4-203ENST00000429416 TPM2P07951 284 aa20.46■□□□□ 0.87
SMARCA4-203ENST00000429416 WDHD1O75717 1129 aaPredicted RBP20.45■□□□□ 0.86
SMARCA4-203ENST00000429416 POLR3DP05423 398 aaPredicted RBP20.45■□□□□ 0.86
SMARCA4-203ENST00000429416 TRPM2O94759 1503 aa20.45■□□□□ 0.86
SMARCA4-203ENST00000429416 ANKRD13DQ6ZTN6 518 aa20.45■□□□□ 0.86
SMARCA4-203ENST00000429416 TMEM2Q9UHN6 1383 aa20.45■□□□□ 0.86
SMARCA4-203ENST00000429416 TMEM132AQ24JP5 1023 aa20.44■□□□□ 0.86
SMARCA4-203ENST00000429416 NPATQ14207 1427 aa20.44■□□□□ 0.86
SMARCA4-203ENST00000429416 FLT4P35916 1363 aa20.44■□□□□ 0.86
SMARCA4-203ENST00000429416 NEK4P51957 841 aa20.44■□□□□ 0.86
SMARCA4-203ENST00000429416 NIP7Q9Y221 180 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMARCA4-203ENST00000429416 R3HCC1Q9Y3T6 440 aaKnown RBP20.44■□□□□ 0.86
SMARCA4-203ENST00000429416 CWC27Q6UX04 472 aaKnown RBP20.44■□□□□ 0.86
SMARCA4-203ENST00000429416 POLKQ9UBT6 870 aa20.44■□□□□ 0.86
SMARCA4-203ENST00000429416 MBIPQ9NS73 344 aa20.44■□□□□ 0.86
SMARCA4-203ENST00000429416 LRRFIP2Q9Y608 721 aaKnown RBP20.44■□□□□ 0.86
SMARCA4-203ENST00000429416 UBAC1Q9BSL1 405 aa20.43■□□□□ 0.86
SMARCA4-203ENST00000429416 PCMTD1Q96MG8 357 aaPredicted RBP20.43■□□□□ 0.86
SMARCA4-203ENST00000429416 ABCC1P33527 1531 aa20.43■□□□□ 0.86
SMARCA4-203ENST00000429416 CCDC69A6NI79 296 aa20.43■□□□□ 0.86
SMARCA4-203ENST00000429416 KIF1BPQ96EK5 621 aa20.43■□□□□ 0.86
SMARCA4-203ENST00000429416 PRAG1Q86YV5 1406 aa20.43■□□□□ 0.86
SMARCA4-203ENST00000429416 SHANK2Q9UPX8 1470 aa20.43■□□□□ 0.86
SMARCA4-203ENST00000429416 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
SMARCA4-203ENST00000429416 NOC3LQ8WTT2 800 aaKnown RBP20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 PARP3Q9Y6F1 533 aa20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 BOLA2Q9H3K6 86 aa20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 TSPOAP1O95153 1857 aa20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 XAGE3Q8WTP9 111 aa20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 MINDY4BA8MYZ0 360 aa20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 GOLGA6L19H0YKK7 550 aa20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 TSR1Q2NL82 804 aaKnown RBP20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 COPS6Q7L5N1 327 aa20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 CCDC8Q9H0W5 538 aaPredicted RBP20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 STK32BQ9NY57 414 aa20.42■□□□□ 0.86
SMARCA4-203ENST00000429416 HOXC9P31274 260 aa20.41■□□□□ 0.86
SMARCA4-203ENST00000429416 IP6K1Q92551 441 aa20.41■□□□□ 0.86
SMARCA4-203ENST00000429416 NLRP3Q96P20 1036 aa20.41■□□□□ 0.86
SMARCA4-203ENST00000429416 GNPATO15228 680 aa20.41■□□□□ 0.86
SMARCA4-203ENST00000429416 CHPF2Q9P2E5 772 aa20.41■□□□□ 0.86
SMARCA4-203ENST00000429416 STK3Q13188 491 aa20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 ALDH1L2Q3SY69 923 aa20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 PIBF1Q8WXW3 757 aa20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 EYA1Q99502 592 aa20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 HOOK1Q9UJC3 728 aaKnown RBP20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 MAP3K19Q56UN5 1328 aa20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 TCOF1Q13428 1488 aaKnown RBP20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 GRM1Q13255 1194 aa20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 WDR78Q5VTH9 848 aa20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 CHD1LQ86WJ1 897 aa20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 MTHFSDQ2M296 383 aaKnown RBP20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 DZIP3Q86Y13 1208 aaKnown RBP20.4■□□□□ 0.86
SMARCA4-203ENST00000429416 CCNL1Q9UK58 526 aaPredicted RBP20.39■□□□□ 0.86
SMARCA4-203ENST00000429416 MKNK2Q9HBH9 465 aa20.39■□□□□ 0.85
SMARCA4-203ENST00000429416 CLEC11AQ9Y240 323 aa20.39■□□□□ 0.85
SMARCA4-203ENST00000429416 SOGA3Q5TF21 947 aa20.39■□□□□ 0.85
SMARCA4-203ENST00000429416 PCDH11XQ9BZA7 1347 aa20.39■□□□□ 0.85
SMARCA4-203ENST00000429416 PCDH11YQ9BZA8 1340 aa20.39■□□□□ 0.85
SMARCA4-203ENST00000429416 RARSP54136 660 aaKnown RBP20.39■□□□□ 0.85
SMARCA4-203ENST00000429416 MAP3K12Q12852 859 aa20.39■□□□□ 0.85
SMARCA4-203ENST00000429416 CCDC152Q4G0S7 254 aa20.39■□□□□ 0.85
SMARCA4-203ENST00000429416 CTNNA3Q9UI47 895 aa20.39■□□□□ 0.85
SMARCA4-203ENST00000429416 DCAF5Q96JK2 942 aa20.38■□□□□ 0.85
SMARCA4-203ENST00000429416 CDCA7Q9BWT1 371 aaPredicted RBP20.38■□□□□ 0.85
SMARCA4-203ENST00000429416 SMARCA5O60264 1052 aaPredicted RBP20.38■□□□□ 0.85
SMARCA4-203ENST00000429416 TRIM22Q8IYM9 498 aa20.38■□□□□ 0.85
SMARCA4-203ENST00000429416 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.38■□□□□ 0.85
SMARCA4-203ENST00000429416 DDX11L8A8MPP1 907 aa20.37■□□□□ 0.85
SMARCA4-203ENST00000429416 CYP46A1Q9Y6A2 500 aa20.37■□□□□ 0.85
SMARCA4-203ENST00000429416 TPM3P06753 285 aa20.36■□□□□ 0.85
SMARCA4-203ENST00000429416 CCDC73Q6ZRK6 1079 aa20.36■□□□□ 0.85
SMARCA4-203ENST00000429416 CDK5RAP3Q96JB5 506 aa20.36■□□□□ 0.85
SMARCA4-203ENST00000429416 NAP1L5Q96NT1 182 aaPredicted RBP20.36■□□□□ 0.85
SMARCA4-203ENST00000429416 CFAP65Q6ZU64 1925 aaKnown RBP20.36■□□□□ 0.85
SMARCA4-203ENST00000429416 APBA3O96018 575 aa20.36■□□□□ 0.85
SMARCA4-203ENST00000429416 TPTE2Q6XPS3 522 aa20.36■□□□□ 0.85
SMARCA4-203ENST00000429416 TRAPPC3LQ5T215 181 aa20.36■□□□□ 0.85
SMARCA4-203ENST00000429416 SLF2Q8IX21 1173 aa20.36■□□□□ 0.85
SMARCA4-203ENST00000429416 TMEM94Q12767 1356 aa20.35■□□□□ 0.85
SMARCA4-203ENST00000429416 ANKRD18AQ8IVF6 992 aa20.35■□□□□ 0.85
SMARCA4-203ENST00000429416 ZNF287Q9HBT7 754 aa20.35■□□□□ 0.85
SMARCA4-203ENST00000429416 A0A1W2PP64 1363 aa20.35■□□□□ 0.85
SMARCA4-203ENST00000429416 ANKRD20A12PQ8NF67 263 aa20.35■□□□□ 0.85
SMARCA4-203ENST00000429416 PIK3R4Q99570 1358 aa20.35■□□□□ 0.85
SMARCA4-203ENST00000429416 SNRKQ9NRH2 765 aa20.34■□□□□ 0.85
SMARCA4-203ENST00000429416 TPM1P09493 284 aa20.34■□□□□ 0.85
SMARCA4-203ENST00000429416 GOLGA6L3A6NEY3 463 aa20.34■□□□□ 0.85
SMARCA4-203ENST00000429416 RAB11FIP3O75154 756 aa20.34■□□□□ 0.85
SMARCA4-203ENST00000429416 ARHGEF10O15013 1369 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms