RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 EXOC5O00471 708 aa14.54□□□□□ -0.08
CECR3-201ENST00000428828 CYP27B1O15528 508 aa14.54□□□□□ -0.08
CECR3-201ENST00000428828 TRIM35Q9UPQ4 493 aa14.54□□□□□ -0.08
CECR3-201ENST00000428828 AKAP4Q5JQC9 854 aa14.53□□□□□ -0.08
CECR3-201ENST00000428828 MPRIPQ6WCQ1 1025 aa14.53□□□□□ -0.08
CECR3-201ENST00000428828 NPM2Q86SE8 214 aaKnown RBP14.53□□□□□ -0.08
CECR3-201ENST00000428828 RTF1Q92541 710 aaKnown RBP14.53□□□□□ -0.08
CECR3-201ENST00000428828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.53□□□□□ -0.08
CECR3-201ENST00000428828 SIPA1L3O60292 1781 aaPredicted RBP14.53□□□□□ -0.08
CECR3-201ENST00000428828 PHKG2P15735 406 aa14.53□□□□□ -0.08
CECR3-201ENST00000428828 IFNL2Q8IZJ0 200 aa14.53□□□□□ -0.08
CECR3-201ENST00000428828 PLEKHG2Q9H7P9 1386 aa14.53□□□□□ -0.08
CECR3-201ENST00000428828 ADAMTS7Q9UKP4 1686 aa14.52□□□□□ -0.09
CECR3-201ENST00000428828 LMOD3Q0VAK6 560 aa14.52□□□□□ -0.09
CECR3-201ENST00000428828 WWC1Q8IX03 1113 aa14.52□□□□□ -0.09
CECR3-201ENST00000428828 RBM6P78332 1123 aaKnown RBP14.51□□□□□ -0.09
CECR3-201ENST00000428828 L1TD1Q5T7N2 865 aaKnown RBP14.51□□□□□ -0.09
CECR3-201ENST00000428828 POTEAQ6S8J7 498 aa14.51□□□□□ -0.09
CECR3-201ENST00000428828 SEPT12Q8IYM1 358 aa14.51□□□□□ -0.09
CECR3-201ENST00000428828 LGR6Q9HBX8 967 aa14.51□□□□□ -0.09
CECR3-201ENST00000428828 KDM6AO15550 1401 aaPredicted RBP14.5□□□□□ -0.09
CECR3-201ENST00000428828 HSP90AA1P07900 732 aaKnown RBP14.5□□□□□ -0.09
CECR3-201ENST00000428828 RXRBP28702 533 aa14.5□□□□□ -0.09
CECR3-201ENST00000428828 PDE3BQ13370 1112 aa14.49□□□□□ -0.09
CECR3-201ENST00000428828 CCDC27Q2M243 656 aa14.49□□□□□ -0.09
CECR3-201ENST00000428828 SBF2Q86WG5 1849 aa14.49□□□□□ -0.09
CECR3-201ENST00000428828 ZNF521Q96K83 1311 aa14.49□□□□□ -0.09
CECR3-201ENST00000428828 FAM182BQ5T319 152 aa14.49□□□□□ -0.09
CECR3-201ENST00000428828 IL17REQ8NFR9 667 aa14.49□□□□□ -0.09
CECR3-201ENST00000428828 RNMTO43148 476 aaKnown RBP14.48□□□□□ -0.09
CECR3-201ENST00000428828 CLCN1P35523 988 aa14.48□□□□□ -0.09
CECR3-201ENST00000428828 NGEFQ8N5V2 710 aa14.48□□□□□ -0.09
CECR3-201ENST00000428828 MARCH10Q8NA82 808 aaPredicted RBP14.48□□□□□ -0.09
CECR3-201ENST00000428828 CDCA7LQ96GN5 454 aa14.48□□□□□ -0.09
CECR3-201ENST00000428828 RGS12O14924 1447 aa14.48□□□□□ -0.09
CECR3-201ENST00000428828 HSP90AB1P08238 724 aaKnown RBP14.47□□□□□ -0.09
CECR3-201ENST00000428828 RRAGDQ9NQL2 400 aaPredicted RBP14.47□□□□□ -0.09
CECR3-201ENST00000428828 KDM3BQ7LBC6 1761 aa14.47□□□□□ -0.09
CECR3-201ENST00000428828 HTATSF1O43719 755 aaKnown RBP14.47□□□□□ -0.09
CECR3-201ENST00000428828 ONECUT3O60422 494 aaPredicted RBP14.47□□□□□ -0.09
CECR3-201ENST00000428828 GOLGA2Q08379 1002 aa14.47□□□□□ -0.09
CECR3-201ENST00000428828 DCAF5Q96JK2 942 aa14.47□□□□□ -0.09
CECR3-201ENST00000428828 RRP1P56182 461 aaKnown RBP14.46□□□□□ -0.09
CECR3-201ENST00000428828 TEFQ10587 303 aa14.46□□□□□ -0.09
CECR3-201ENST00000428828 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
CECR3-201ENST00000428828 CEMIPQ8WUJ3 1361 aa14.46□□□□□ -0.1
CECR3-201ENST00000428828 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
CECR3-201ENST00000428828 EP400Q96L91 3159 aa14.45□□□□□ -0.1
CECR3-201ENST00000428828 WDR63Q8IWG1 891 aa14.45□□□□□ -0.1
CECR3-201ENST00000428828 SYTL4Q96C24 671 aaPredicted RBP14.45□□□□□ -0.1
CECR3-201ENST00000428828 ACSBG1Q96GR2 724 aa14.45□□□□□ -0.1
CECR3-201ENST00000428828 MIS18AQ9NYP9 233 aa14.45□□□□□ -0.1
CECR3-201ENST00000428828 MRC1P22897 1456 aa14.44□□□□□ -0.1
CECR3-201ENST00000428828 CALD1Q05682 793 aaKnown RBP14.44□□□□□ -0.1
CECR3-201ENST00000428828 NKX1-1Q15270 411 aaPredicted RBP14.44□□□□□ -0.1
CECR3-201ENST00000428828 TSR2Q969E8 191 aaKnown RBP14.44□□□□□ -0.1
CECR3-201ENST00000428828 NHSQ6T4R5 1651 aa14.43□□□□□ -0.1
CECR3-201ENST00000428828 CABP4P57796 275 aa14.43□□□□□ -0.1
CECR3-201ENST00000428828 KRT27Q7Z3Y8 459 aa14.43□□□□□ -0.1
CECR3-201ENST00000428828 BTAF1O14981 1849 aa14.43□□□□□ -0.1
CECR3-201ENST00000428828 PAPPAQ13219 1627 aa14.43□□□□□ -0.1
CECR3-201ENST00000428828 NFATC2IPQ8NCF5 419 aa14.43□□□□□ -0.1
CECR3-201ENST00000428828 SLC52A2Q9HAB3 445 aa14.43□□□□□ -0.1
CECR3-201ENST00000428828 E9PSI1 815 aa14.41□□□□□ -0.1
CECR3-201ENST00000428828 GNAI1P63096 354 aa14.41□□□□□ -0.1
CECR3-201ENST00000428828 SLFN5Q08AF3 891 aa14.41□□□□□ -0.1
CECR3-201ENST00000428828 TAF7Q15545 349 aaPredicted RBP14.41□□□□□ -0.1
CECR3-201ENST00000428828 IFT57Q9NWB7 429 aa14.41□□□□□ -0.1
CECR3-201ENST00000428828 TSPYL4Q9UJ04 414 aa14.41□□□□□ -0.1
CECR3-201ENST00000428828 UBR2Q8IWV8 1755 aa14.41□□□□□ -0.1
CECR3-201ENST00000428828 BTBD11A6QL63 1104 aa14.41□□□□□ -0.1
CECR3-201ENST00000428828 CFAP44Q96MT7 982 aa14.41□□□□□ -0.1
CECR3-201ENST00000428828 MBIPQ9NS73 344 aa14.41□□□□□ -0.1
CECR3-201ENST00000428828 TMOD3Q9NYL9 352 aa14.41□□□□□ -0.1
CECR3-201ENST00000428828 IL16Q14005 1332 aa14.4□□□□□ -0.1
CECR3-201ENST00000428828 ERVV-2B6SEH9 535 aa14.4□□□□□ -0.1
CECR3-201ENST00000428828 PRIM1P49642 420 aaKnown RBP14.4□□□□□ -0.1
CECR3-201ENST00000428828 MYH16Q9H6N6 1097 aa14.4□□□□□ -0.1
CECR3-201ENST00000428828 C5P01031 1676 aa14.39□□□□□ -0.11
CECR3-201ENST00000428828 SLC39A6Q13433 755 aa14.39□□□□□ -0.11
CECR3-201ENST00000428828 KCNQ2O43526 872 aa14.39□□□□□ -0.11
CECR3-201ENST00000428828 FRAT2O75474 233 aaPredicted RBP14.39□□□□□ -0.11
CECR3-201ENST00000428828 ZNF853P0CG23 659 aa14.38□□□□□ -0.11
CECR3-201ENST00000428828 DUSP27Q5VZP5 1158 aa14.38□□□□□ -0.11
CECR3-201ENST00000428828 EXOC6Q8TAG9 804 aa14.38□□□□□ -0.11
CECR3-201ENST00000428828 CHL1O00533 1208 aa14.37□□□□□ -0.11
CECR3-201ENST00000428828 KCNQ3O43525 872 aa14.37□□□□□ -0.11
CECR3-201ENST00000428828 PIGBQ92521 554 aa14.37□□□□□ -0.11
CECR3-201ENST00000428828 NAP1L5Q96NT1 182 aaPredicted RBP14.37□□□□□ -0.11
CECR3-201ENST00000428828 PDCL3Q9H2J4 239 aa14.37□□□□□ -0.11
CECR3-201ENST00000428828 BCL9O00512 1426 aa14.37□□□□□ -0.11
CECR3-201ENST00000428828 PTF1AQ7RTS3 328 aa14.37□□□□□ -0.11
CECR3-201ENST00000428828 TPM2P07951 284 aa14.36□□□□□ -0.11
CECR3-201ENST00000428828 EXOSC9Q06265 439 aaKnown RBP14.36□□□□□ -0.11
CECR3-201ENST00000428828 KRT24Q2M2I5 525 aa14.36□□□□□ -0.11
CECR3-201ENST00000428828 TTC5Q8N0Z6 440 aa14.36□□□□□ -0.11
CECR3-201ENST00000428828 LAMB4A4D0S4 1761 aa14.35□□□□□ -0.11
CECR3-201ENST00000428828 ELL2O00472 640 aaPredicted RBP14.35□□□□□ -0.11
CECR3-201ENST00000428828 FAM196AQ6ZSG2 479 aa14.35□□□□□ -0.11
CECR3-201ENST00000428828 TNS1Q9HBL0 1735 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms