RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 FKBP4Q02790 459 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTNND1-208ENST00000428599 TAX1BP1Q86VP1 789 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 SRCIN1Q9C0H9 1055 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 LRP2BPQ9P2M1 347 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 ZNF652Q9Y2D9 606 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 SYCP2Q9BX26 1530 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 NASPP49321 788 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-208ENST00000428599 CHMP4BP1P59074 171 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 NFE2L2Q16236 605 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 CRACR2BQ8N4Y2 399 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-208ENST00000428599 GCC1Q96CN9 775 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
CTNND1-208ENST00000428599 ME1P48163 572 aa10.5□□□□□ -0.73
CTNND1-208ENST00000428599 USHBP1Q8N6Y0 703 aa10.5□□□□□ -0.73
CTNND1-208ENST00000428599 DMRT2Q9Y5R5 561 aa10.5□□□□□ -0.73
CTNND1-208ENST00000428599 ANAPC15P60006 121 aa10.5□□□□□ -0.73
CTNND1-208ENST00000428599 KIAA0556O60303 1618 aa10.5□□□□□ -0.73
CTNND1-208ENST00000428599 RNF214Q8ND24 703 aa10.5□□□□□ -0.73
CTNND1-208ENST00000428599 CEP126Q9P2H0 1117 aa10.5□□□□□ -0.73
CTNND1-208ENST00000428599 SEC63Q9UGP8 760 aaKnown RBP10.5□□□□□ -0.73
CTNND1-208ENST00000428599 STK3Q13188 491 aa10.5□□□□□ -0.73
CTNND1-208ENST00000428599 CEP57L1Q8IYX8 460 aa10.5□□□□□ -0.73
CTNND1-208ENST00000428599 LRRCC1Q9C099 1032 aa10.5□□□□□ -0.73
CTNND1-208ENST00000428599 A2MP01023 1474 aa10.49□□□□□ -0.73
CTNND1-208ENST00000428599 ZNF518AQ6AHZ1 1483 aa10.49□□□□□ -0.73
CTNND1-208ENST00000428599 ZPR1O75312 459 aa10.49□□□□□ -0.73
CTNND1-208ENST00000428599 STARD3NLO95772 234 aa10.49□□□□□ -0.73
CTNND1-208ENST00000428599 TAF4BQ92750 862 aa10.49□□□□□ -0.73
CTNND1-208ENST00000428599 KIAA0754O94854 1291 aa10.49□□□□□ -0.73
CTNND1-208ENST00000428599 FIBPO43427 364 aa10.49□□□□□ -0.73
CTNND1-208ENST00000428599 TMPOP42166 694 aaKnown RBP10.49□□□□□ -0.73
CTNND1-208ENST00000428599 C14orf93Q9H972 538 aaKnown RBP10.49□□□□□ -0.73
CTNND1-208ENST00000428599 ERLIN1O75477 346 aa10.49□□□□□ -0.73
CTNND1-208ENST00000428599 CCDC91Q7Z6B0 441 aa10.49□□□□□ -0.73
CTNND1-208ENST00000428599 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 CEP131Q9UPN4 1083 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 SCAF11Q99590 1463 aaKnown RBP10.48□□□□□ -0.73
CTNND1-208ENST00000428599 DUOX2Q9NRD8 1548 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 EPB41L2O43491 1005 aaKnown RBP10.48□□□□□ -0.73
CTNND1-208ENST00000428599 MYCNP04198 464 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-208ENST00000428599 PDE3AQ14432 1141 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 KRT28Q7Z3Y7 464 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 CCDC150Q8NCX0 1101 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 EMILIN1Q9Y6C2 1016 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 MRE11P49959 708 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 CCDC184Q52MB2 194 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 MCM10Q7L590 875 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 DRC1Q96MC2 740 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 EHMT1Q9H9B1 1298 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 MIS18AQ9NYP9 233 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 CCDC192P0DO97 292 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 MTERF4Q7Z6M4 381 aaKnown RBP10.48□□□□□ -0.73
CTNND1-208ENST00000428599 POLR3DP05423 398 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-208ENST00000428599 AIDAQ96BJ3 306 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 TNMDQ9H2S6 317 aa10.48□□□□□ -0.73
CTNND1-208ENST00000428599 LRPPRCP42704 1394 aaKnown RBP10.47□□□□□ -0.73
CTNND1-208ENST00000428599 CAVIN4Q5BKX8 364 aa10.47□□□□□ -0.73
CTNND1-208ENST00000428599 WDR78Q5VTH9 848 aa10.47□□□□□ -0.73
CTNND1-208ENST00000428599 CENPHQ9H3R5 247 aa10.47□□□□□ -0.73
CTNND1-208ENST00000428599 PTCD1O75127 700 aaKnown RBP10.47□□□□□ -0.73
CTNND1-208ENST00000428599 CAVIN1Q6NZI2 390 aaKnown RBP10.47□□□□□ -0.73
CTNND1-208ENST00000428599 AACSQ86V21 672 aa10.47□□□□□ -0.73
CTNND1-208ENST00000428599 CUL5Q93034 780 aa10.47□□□□□ -0.73
CTNND1-208ENST00000428599 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
CTNND1-208ENST00000428599 TMOD3Q9NYL9 352 aa10.47□□□□□ -0.73
CTNND1-208ENST00000428599 RPRD2Q5VT52 1461 aaKnown RBP10.47□□□□□ -0.73
CTNND1-208ENST00000428599 ATF7IPQ6VMQ6 1270 aa10.47□□□□□ -0.73
CTNND1-208ENST00000428599 ZNF397Q8NF99 534 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-208ENST00000428599 PRPF40AO75400 957 aaKnown RBP10.46□□□□□ -0.73
CTNND1-208ENST00000428599 EIF5P55010 431 aaKnown RBP10.46□□□□□ -0.73
CTNND1-208ENST00000428599 CCDC66A2RUB6 948 aa10.46□□□□□ -0.73
CTNND1-208ENST00000428599 KRT85P78386 507 aa10.46□□□□□ -0.73
CTNND1-208ENST00000428599 KRT32Q14532 448 aa10.46□□□□□ -0.73
CTNND1-208ENST00000428599 NGLY1Q96IV0 654 aa10.46□□□□□ -0.73
CTNND1-208ENST00000428599 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.74
CTNND1-208ENST00000428599 STAMBPO95630 424 aa10.46□□□□□ -0.74
CTNND1-208ENST00000428599 HMGN5P82970 282 aaKnown RBP10.46□□□□□ -0.74
CTNND1-208ENST00000428599 GRIPAP1Q4V328 841 aa10.46□□□□□ -0.74
CTNND1-208ENST00000428599 INCENPQ9NQS7 918 aa10.46□□□□□ -0.74
CTNND1-208ENST00000428599 PDZRN3Q9UPQ7 1066 aa10.46□□□□□ -0.74
CTNND1-208ENST00000428599 UHRF1BP1LA0JNW5 1464 aa10.46□□□□□ -0.74
CTNND1-208ENST00000428599 TRAPPC8Q9Y2L5 1435 aa10.46□□□□□ -0.74
CTNND1-208ENST00000428599 IMMTQ16891 758 aaKnown RBP10.45□□□□□ -0.74
CTNND1-208ENST00000428599 CADPS2Q86UW7 1296 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 C11orf95C9JLR9 678 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-208ENST00000428599 IDH1O75874 414 aaKnown RBP10.45□□□□□ -0.74
CTNND1-208ENST00000428599 SLF2Q8IX21 1173 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 TSG101Q99816 390 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 WDR33Q9C0J8 1336 aaKnown RBP10.45□□□□□ -0.74
CTNND1-208ENST00000428599 AMOTQ4VCS5 1084 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 BLOC1S2Q6QNY1 142 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 PIBF1Q8WXW3 757 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 ANKIB1Q9P2G1 1089 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 MKNK2Q9HBH9 465 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 CFAP45Q9UL16 551 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 AKAP2Q9Y2D5 859 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 LARP1BQ659C4 914 aaKnown RBP10.45□□□□□ -0.74
CTNND1-208ENST00000428599 ZSCAN31Q96LW9 406 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-208ENST00000428599 ABCF2Q9UG63 623 aa10.45□□□□□ -0.74
CTNND1-208ENST00000428599 KIAA1328Q86T90 577 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms