RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 WNK3Q9BYP7 1800 aa10.8□□□□□ -0.68
SH3D19-204ENST00000427414 TRIM27P14373 513 aa10.79□□□□□ -0.68
SH3D19-204ENST00000427414 LMOD2Q6P5Q4 547 aa10.79□□□□□ -0.68
SH3D19-204ENST00000427414 FTSJ3Q8IY81 847 aaKnown RBP10.79□□□□□ -0.68
SH3D19-204ENST00000427414 RAPGEF4Q8WZA2 1011 aa10.79□□□□□ -0.68
SH3D19-204ENST00000427414 TSPYL4Q9UJ04 414 aa10.79□□□□□ -0.68
SH3D19-204ENST00000427414 FAM83GA6ND36 823 aa10.79□□□□□ -0.68
SH3D19-204ENST00000427414 NOB1Q9ULX3 412 aaKnown RBP10.79□□□□□ -0.68
SH3D19-204ENST00000427414 RNMTO43148 476 aaKnown RBP10.78□□□□□ -0.68
SH3D19-204ENST00000427414 HDAC1Q13547 482 aaPredicted RBP10.78□□□□□ -0.68
SH3D19-204ENST00000427414 CCDC30Q5VVM6 783 aa10.78□□□□□ -0.68
SH3D19-204ENST00000427414 INTS3Q68E01 1043 aaKnown RBP10.78□□□□□ -0.68
SH3D19-204ENST00000427414 MCM10Q7L590 875 aa10.78□□□□□ -0.68
SH3D19-204ENST00000427414 C8orf58Q8NAV2 365 aa10.78□□□□□ -0.68
SH3D19-204ENST00000427414 NKX1-1Q15270 411 aaPredicted RBP10.78□□□□□ -0.68
SH3D19-204ENST00000427414 ZNF530Q6P9A1 599 aaPredicted RBP10.78□□□□□ -0.68
SH3D19-204ENST00000427414 RWDD1Q9H446 243 aaPredicted RBP10.78□□□□□ -0.68
SH3D19-204ENST00000427414 PAPPAQ13219 1627 aa10.77□□□□□ -0.68
SH3D19-204ENST00000427414 LTV1Q96GA3 475 aaPredicted RBP10.77□□□□□ -0.69
SH3D19-204ENST00000427414 THUMPD2Q9BTF0 503 aaKnown RBP10.77□□□□□ -0.69
SH3D19-204ENST00000427414 TOM1O60784 492 aa10.77□□□□□ -0.69
SH3D19-204ENST00000427414 IFNL2Q8IZJ0 200 aa10.77□□□□□ -0.69
SH3D19-204ENST00000427414 DCAF5Q96JK2 942 aa10.77□□□□□ -0.69
SH3D19-204ENST00000427414 NRAPQ86VF7 1730 aa10.76□□□□□ -0.69
SH3D19-204ENST00000427414 SHANK3Q9BYB0 1731 aa10.76□□□□□ -0.69
SH3D19-204ENST00000427414 ZC3H6P61129 1189 aaKnown RBP10.76□□□□□ -0.69
SH3D19-204ENST00000427414 MEGF6O75095 1541 aa10.76□□□□□ -0.69
SH3D19-204ENST00000427414 DCTN1Q14203 1278 aa10.76□□□□□ -0.69
SH3D19-204ENST00000427414 TSPYL6Q8N831 410 aa10.76□□□□□ -0.69
SH3D19-204ENST00000427414 CDCA7Q9BWT1 371 aaPredicted RBP10.76□□□□□ -0.69
SH3D19-204ENST00000427414 PRDM11Q9NQV5 511 aa10.76□□□□□ -0.69
SH3D19-204ENST00000427414 ZBTB40Q9NUA8 1239 aa10.76□□□□□ -0.69
SH3D19-204ENST00000427414 LAMB4A4D0S4 1761 aa10.76□□□□□ -0.69
SH3D19-204ENST00000427414 RGS12O14924 1447 aa10.75□□□□□ -0.69
SH3D19-204ENST00000427414 PCDH11XQ9BZA7 1347 aa10.75□□□□□ -0.69
SH3D19-204ENST00000427414 PCDH11YQ9BZA8 1340 aa10.75□□□□□ -0.69
SH3D19-204ENST00000427414 UBR2Q8IWV8 1755 aa10.75□□□□□ -0.69
SH3D19-204ENST00000427414 PHKG2P15735 406 aa10.75□□□□□ -0.69
SH3D19-204ENST00000427414 TEFQ10587 303 aa10.75□□□□□ -0.69
SH3D19-204ENST00000427414 PANK1Q8TE04 598 aa10.75□□□□□ -0.69
SH3D19-204ENST00000427414 EIF4A1P60842 406 aaKnown RBP10.74□□□□□ -0.69
SH3D19-204ENST00000427414 STK31Q9BXU1 1019 aa10.74□□□□□ -0.69
SH3D19-204ENST00000427414 COG6Q9Y2V7 657 aa10.74□□□□□ -0.69
SH3D19-204ENST00000427414 RLBP1P12271 317 aa10.74□□□□□ -0.69
SH3D19-204ENST00000427414 CCT4P50991 539 aaKnown RBP10.74□□□□□ -0.69
SH3D19-204ENST00000427414 DDX17Q92841 729 aaKnown RBP10.74□□□□□ -0.69
SH3D19-204ENST00000427414 NLRP2Q9NX02 1062 aa10.74□□□□□ -0.69
SH3D19-204ENST00000427414 THRAP3Q9Y2W1 955 aaKnown RBP10.74□□□□□ -0.69
SH3D19-204ENST00000427414 DISP2A7MBM2 1401 aa10.74□□□□□ -0.69
SH3D19-204ENST00000427414 ERVV-2B6SEH9 535 aa10.73□□□□□ -0.69
SH3D19-204ENST00000427414 KDM6AO15550 1401 aaPredicted RBP10.73□□□□□ -0.69
SH3D19-204ENST00000427414 ZBTB7BO15156 539 aaPredicted RBP10.73□□□□□ -0.69
SH3D19-204ENST00000427414 ERBB4Q15303 1308 aa10.73□□□□□ -0.69
SH3D19-204ENST00000427414 ATP10DQ9P241 1426 aa10.73□□□□□ -0.69
SH3D19-204ENST00000427414 CSB-PGBD3P0DP91 1061 aa10.72□□□□□ -0.69
SH3D19-204ENST00000427414 USHBP1Q8N6Y0 703 aa10.72□□□□□ -0.69
SH3D19-204ENST00000427414 SLC52A2Q9HAB3 445 aa10.72□□□□□ -0.69
SH3D19-204ENST00000427414 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.72□□□□□ -0.69
SH3D19-204ENST00000427414 FRAT2O75474 233 aaPredicted RBP10.72□□□□□ -0.69
SH3D19-204ENST00000427414 TMEM57Q8N5G2 664 aa10.72□□□□□ -0.69
SH3D19-204ENST00000427414 CICQ96RK0 1608 aaPredicted RBP10.72□□□□□ -0.69
SH3D19-204ENST00000427414 BTBD11A6QL63 1104 aa10.71□□□□□ -0.69
SH3D19-204ENST00000427414 IL2RBP14784 551 aa10.71□□□□□ -0.69
SH3D19-204ENST00000427414 FAM161AQ3B820 660 aa10.71□□□□□ -0.69
SH3D19-204ENST00000427414 GCC1Q96CN9 775 aa10.71□□□□□ -0.69
SH3D19-204ENST00000427414 HDAC5Q9UQL6 1122 aa10.71□□□□□ -0.69
SH3D19-204ENST00000427414 ITPRIPQ8IWB1 547 aa10.7□□□□□ -0.7
SH3D19-204ENST00000427414 RPAP2Q8IXW5 612 aaPredicted RBP10.7□□□□□ -0.7
SH3D19-204ENST00000427414 SMC5Q8IY18 1101 aa10.7□□□□□ -0.7
SH3D19-204ENST00000427414 ZCRB1Q8TBF4 217 aaKnown RBP10.7□□□□□ -0.7
SH3D19-204ENST00000427414 CABLES1Q8TDN4 633 aa10.7□□□□□ -0.7
SH3D19-204ENST00000427414 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
SH3D19-204ENST00000427414 ZBTB7CA1YPR0 619 aa10.7□□□□□ -0.7
SH3D19-204ENST00000427414 LGR6Q9HBX8 967 aa10.7□□□□□ -0.7
SH3D19-204ENST00000427414 TNS2Q63HR2 1409 aa10.69□□□□□ -0.7
SH3D19-204ENST00000427414 TOM1L2Q6ZVM7 507 aa10.69□□□□□ -0.7
SH3D19-204ENST00000427414 ZNF831Q5JPB2 1677 aa10.69□□□□□ -0.7
SH3D19-204ENST00000427414 GLI3P10071 1580 aa10.69□□□□□ -0.7
SH3D19-204ENST00000427414 SLIT2O94813 1529 aa10.69□□□□□ -0.7
SH3D19-204ENST00000427414 SLC4A2P04920 1241 aa10.69□□□□□ -0.7
SH3D19-204ENST00000427414 FAM43AQ8N2R8 423 aa10.69□□□□□ -0.7
SH3D19-204ENST00000427414 HYPKQ9NX55 129 aa10.69□□□□□ -0.7
SH3D19-204ENST00000427414 DBF4Q9UBU7 674 aaPredicted RBP10.69□□□□□ -0.7
SH3D19-204ENST00000427414 GIGYF1O75420 1035 aaPredicted RBP10.68□□□□□ -0.7
SH3D19-204ENST00000427414 EVA1CP58658 441 aa10.68□□□□□ -0.7
SH3D19-204ENST00000427414 C8orf34Q49A92 452 aa10.68□□□□□ -0.7
SH3D19-204ENST00000427414 PCDHB15Q9Y5E8 787 aa10.68□□□□□ -0.7
SH3D19-204ENST00000427414 PLEKHG5O94827 1062 aa10.68□□□□□ -0.7
SH3D19-204ENST00000427414 CHRNA2Q15822 529 aa10.68□□□□□ -0.7
SH3D19-204ENST00000427414 JCADQ9P266 1359 aa10.67□□□□□ -0.7
SH3D19-204ENST00000427414 SPATA31A6Q5VVP1 1343 aa10.67□□□□□ -0.7
SH3D19-204ENST00000427414 CYP27B1O15528 508 aa10.67□□□□□ -0.7
SH3D19-204ENST00000427414 GNAI3P08754 354 aa10.67□□□□□ -0.7
SH3D19-204ENST00000427414 RGS3P49796 1198 aa10.67□□□□□ -0.7
SH3D19-204ENST00000427414 HDGFL1Q5TGJ6 251 aa10.67□□□□□ -0.7
SH3D19-204ENST00000427414 ZNF790Q6PG37 636 aa10.67□□□□□ -0.7
SH3D19-204ENST00000427414 MPRIPQ6WCQ1 1025 aa10.67□□□□□ -0.7
SH3D19-204ENST00000427414 FLIIQ13045 1269 aa10.67□□□□□ -0.7
SH3D19-204ENST00000427414 C5P01031 1676 aa10.67□□□□□ -0.7
SH3D19-204ENST00000427414 IGHDP01880 384 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms