RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
SP1-202ENST00000426431 SIL1Q9H173 461 aa12.03□□□□□ -0.48
SP1-202ENST00000426431 ACBD3Q9H3P7 528 aa12.03□□□□□ -0.48
SP1-202ENST00000426431 UHRF1BP1Q6BDS2 1440 aa12.03□□□□□ -0.48
SP1-202ENST00000426431 PRAG1Q86YV5 1406 aa12.03□□□□□ -0.48
SP1-202ENST00000426431 KRT85P78386 507 aa12.03□□□□□ -0.48
SP1-202ENST00000426431 SPTY2D1Q68D10 685 aaPredicted RBP12.03□□□□□ -0.48
SP1-202ENST00000426431 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.48
SP1-202ENST00000426431 ABCA5Q8WWZ7 1642 aa12.02□□□□□ -0.48
SP1-202ENST00000426431 DNAI2Q9GZS0 605 aa12.02□□□□□ -0.48
SP1-202ENST00000426431 ANKRD24Q8TF21 1146 aa12.02□□□□□ -0.49
SP1-202ENST00000426431 PPIP5K1Q6PFW1 1433 aa12.02□□□□□ -0.49
SP1-202ENST00000426431 KRT18P05783 430 aaKnown RBP12.02□□□□□ -0.49
SP1-202ENST00000426431 TRAPPC8Q9Y2L5 1435 aa12.02□□□□□ -0.49
SP1-202ENST00000426431 RARSP54136 660 aaKnown RBP12.01□□□□□ -0.49
SP1-202ENST00000426431 FOXD4L6Q3SYB3 417 aaPredicted RBP12.01□□□□□ -0.49
SP1-202ENST00000426431 FOXD4L3Q6VB84 417 aaPredicted RBP12.01□□□□□ -0.49
SP1-202ENST00000426431 PHAXQ9H814 394 aaKnown RBP12.01□□□□□ -0.49
SP1-202ENST00000426431 DNMT1P26358 1616 aaKnown RBP12.01□□□□□ -0.49
SP1-202ENST00000426431 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
SP1-202ENST00000426431 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
SP1-202ENST00000426431 MX1P20591 662 aa12.01□□□□□ -0.49
SP1-202ENST00000426431 AK7Q96M32 723 aa12.01□□□□□ -0.49
SP1-202ENST00000426431 K7ELQ4 463 aaPredicted RBP12.01□□□□□ -0.49
SP1-202ENST00000426431 CWC25Q9NXE8 425 aaPredicted RBP12.01□□□□□ -0.49
SP1-202ENST00000426431 PPP1R1BQ9UD71 204 aaPredicted RBP12.01□□□□□ -0.49
SP1-202ENST00000426431 TRMT112Q9UI30 125 aaKnown RBP12.01□□□□□ -0.49
SP1-202ENST00000426431 MRE11P49959 708 aa12.01□□□□□ -0.49
SP1-202ENST00000426431 MCM10Q7L590 875 aa12.01□□□□□ -0.49
SP1-202ENST00000426431 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
SP1-202ENST00000426431 FLT4P35916 1363 aa12.01□□□□□ -0.49
SP1-202ENST00000426431 ADGRL2O95490 1459 aa12□□□□□ -0.49
SP1-202ENST00000426431 TRAF1Q13077 416 aa12□□□□□ -0.49
SP1-202ENST00000426431 TNIP1Q15025 636 aa12□□□□□ -0.49
SP1-202ENST00000426431 TMEM57Q8N5G2 664 aa12□□□□□ -0.49
SP1-202ENST00000426431 ZMYM3Q14202 1370 aa12□□□□□ -0.49
SP1-202ENST00000426431 PTCD1O75127 700 aaKnown RBP12□□□□□ -0.49
SP1-202ENST00000426431 ZSCAN29Q8IWY8 852 aaPredicted RBP12□□□□□ -0.49
SP1-202ENST00000426431 ZBTB4Q9P1Z0 1013 aaPredicted RBP12□□□□□ -0.49
SP1-202ENST00000426431 SH2B1Q9NRF2 756 aaPredicted RBP12□□□□□ -0.49
SP1-202ENST00000426431 ADAMTS2O95450 1211 aa12□□□□□ -0.49
SP1-202ENST00000426431 PDRG1Q9NUG6 133 aa12□□□□□ -0.49
SP1-202ENST00000426431 ATP7AQ04656 1500 aa12□□□□□ -0.49
SP1-202ENST00000426431 MYD88Q99836 296 aa12□□□□□ -0.49
SP1-202ENST00000426431 CCDC39Q9UFE4 941 aa12□□□□□ -0.49
SP1-202ENST00000426431 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
SP1-202ENST00000426431 EHMT1Q9H9B1 1298 aa11.99□□□□□ -0.49
SP1-202ENST00000426431 MPRIPQ6WCQ1 1025 aa11.99□□□□□ -0.49
SP1-202ENST00000426431 ARGLU1Q9NWB6 273 aaPredicted RBP11.99□□□□□ -0.49
SP1-202ENST00000426431 MAST1Q9Y2H9 1570 aa11.99□□□□□ -0.49
SP1-202ENST00000426431 FLIIQ13045 1269 aa11.99□□□□□ -0.49
SP1-202ENST00000426431 CCDC178Q5BJE1 867 aa11.99□□□□□ -0.49
SP1-202ENST00000426431 ZCRB1Q8TBF4 217 aaKnown RBP11.99□□□□□ -0.49
SP1-202ENST00000426431 LRRC59Q96AG4 307 aaKnown RBP11.99□□□□□ -0.49
SP1-202ENST00000426431 C11orf95C9JLR9 678 aaPredicted RBP11.99□□□□□ -0.49
SP1-202ENST00000426431 UQCRFS1P1P0C7P4 283 aa11.99□□□□□ -0.49
SP1-202ENST00000426431 SYCP1Q15431 976 aa11.99□□□□□ -0.49
SP1-202ENST00000426431 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
SP1-202ENST00000426431 IDH1O75874 414 aaKnown RBP11.99□□□□□ -0.49
SP1-202ENST00000426431 TRIM21P19474 475 aaKnown RBP11.99□□□□□ -0.49
SP1-202ENST00000426431 ST5P78524 1137 aa11.98□□□□□ -0.49
SP1-202ENST00000426431 ATP2B2Q01814 1243 aa11.98□□□□□ -0.49
SP1-202ENST00000426431 TMEM132AQ24JP5 1023 aa11.98□□□□□ -0.49
SP1-202ENST00000426431 DZIP1Q86YF9 867 aaKnown RBP11.98□□□□□ -0.49
SP1-202ENST00000426431 ZGPATQ8N5A5 531 aaKnown RBP11.98□□□□□ -0.49
SP1-202ENST00000426431 ZNHIT6Q9NWK9 470 aaKnown RBP11.98□□□□□ -0.49
SP1-202ENST00000426431 BABAM1Q9NWV8 329 aa11.98□□□□□ -0.49
SP1-202ENST00000426431 SSH1Q8WYL5 1049 aa11.98□□□□□ -0.49
SP1-202ENST00000426431 GSTO1P78417 241 aa11.98□□□□□ -0.49
SP1-202ENST00000426431 POLR3AO14802 1390 aaPredicted RBP11.98□□□□□ -0.49
SP1-202ENST00000426431 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.98□□□□□ -0.49
SP1-202ENST00000426431 DDX46Q7L014 1031 aaKnown RBP11.98□□□□□ -0.49
SP1-202ENST00000426431 ANKIB1Q9P2G1 1089 aa11.98□□□□□ -0.49
SP1-202ENST00000426431 ALDH1L1O75891 902 aa11.98□□□□□ -0.49
SP1-202ENST00000426431 IQCA1Q86XH1 822 aa11.98□□□□□ -0.49
SP1-202ENST00000426431 SEC63Q9UGP8 760 aaKnown RBP11.98□□□□□ -0.49
SP1-202ENST00000426431 NPATQ14207 1427 aa11.98□□□□□ -0.49
SP1-202ENST00000426431 BAG3O95817 575 aa11.97□□□□□ -0.49
SP1-202ENST00000426431 ABCC1P33527 1531 aa11.97□□□□□ -0.49
SP1-202ENST00000426431 USP5P45974 858 aa11.97□□□□□ -0.49
SP1-202ENST00000426431 LARP1BQ659C4 914 aaKnown RBP11.97□□□□□ -0.49
SP1-202ENST00000426431 CBFA2T2O43439 604 aa11.97□□□□□ -0.49
SP1-202ENST00000426431 CCDC192P0DO97 292 aa11.97□□□□□ -0.49
SP1-202ENST00000426431 HMGN5P82970 282 aaKnown RBP11.97□□□□□ -0.49
SP1-202ENST00000426431 NAPBQ9H115 298 aa11.97□□□□□ -0.49
SP1-202ENST00000426431 EVI5LQ96CN4 794 aa11.97□□□□□ -0.49
SP1-202ENST00000426431 RAB34Q9BZG1 259 aa11.97□□□□□ -0.49
SP1-202ENST00000426431 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
SP1-202ENST00000426431 CEP170Q5SW79 1584 aa11.97□□□□□ -0.49
SP1-202ENST00000426431 CCDC152Q4G0S7 254 aa11.96□□□□□ -0.49
SP1-202ENST00000426431 NYXQ9GZU5 481 aa11.96□□□□□ -0.49
SP1-202ENST00000426431 UBAP1LF5GYI3 381 aa11.96□□□□□ -0.49
SP1-202ENST00000426431 SMC2O95347 1197 aa11.96□□□□□ -0.49
SP1-202ENST00000426431 DESP17661 470 aa11.96□□□□□ -0.49
SP1-202ENST00000426431 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.49
SP1-202ENST00000426431 CCAR2Q8N163 923 aaKnown RBP11.96□□□□□ -0.49
SP1-202ENST00000426431 CRACR2BQ8N4Y2 399 aaPredicted RBP11.96□□□□□ -0.49
SP1-202ENST00000426431 MAPKBP1O60336 1514 aa11.96□□□□□ -0.49
SP1-202ENST00000426431 CCDC12Q8WUD4 166 aaPredicted RBP11.96□□□□□ -0.49
SP1-202ENST00000426431 ERCC4Q92889 916 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms