RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ASAP1Q9ULH1 1129 aa32.27■■■□□ 2.76
VEGFA-209ENST00000425836 ATG3Q9NT62 314 aa32.26■■■□□ 2.75
VEGFA-209ENST00000425836 MRC1P22897 1456 aa32.26■■■□□ 2.75
VEGFA-209ENST00000425836 SCN11AQ9UI33 1791 aa32.26■■■□□ 2.75
VEGFA-209ENST00000425836 TEFQ10587 303 aa32.25■■■□□ 2.75
VEGFA-209ENST00000425836 ITGB4P16144 1822 aa32.25■■■□□ 2.75
VEGFA-209ENST00000425836 SMARCC1Q92922 1105 aaPredicted RBP32.24■■■□□ 2.75
VEGFA-209ENST00000425836 TXNRD1Q16881 649 aa32.24■■■□□ 2.75
VEGFA-209ENST00000425836 PALLDQ8WX93 1383 aa32.23■■■□□ 2.75
VEGFA-209ENST00000425836 LMOD3Q0VAK6 560 aa32.22■■■□□ 2.75
VEGFA-209ENST00000425836 THUMPD2Q9BTF0 503 aaKnown RBP32.22■■■□□ 2.75
VEGFA-209ENST00000425836 TRIM35Q9UPQ4 493 aa32.22■■■□□ 2.75
VEGFA-209ENST00000425836 SENP3-EIF4A1A0A087X0R7 540 aa32.18■■■□□ 2.74
VEGFA-209ENST00000425836 SLC39A6Q13433 755 aa32.17■■■□□ 2.74
VEGFA-209ENST00000425836 LRRC4BQ9NT99 713 aa32.16■■■□□ 2.74
VEGFA-209ENST00000425836 DLG5Q8TDM6 1919 aa32.15■■■□□ 2.74
VEGFA-209ENST00000425836 KCNQ4P56696 695 aa32.15■■■□□ 2.74
VEGFA-209ENST00000425836 TAF7Q15545 349 aaPredicted RBP32.15■■■□□ 2.74
VEGFA-209ENST00000425836 SLC27A3Q5K4L6 730 aa32.15■■■□□ 2.74
VEGFA-209ENST00000425836 RGPD3A6NKT7 1758 aaPredicted RBP32.15■■■□□ 2.74
VEGFA-209ENST00000425836 RGPD4Q7Z3J3 1758 aa32.15■■■□□ 2.74
VEGFA-209ENST00000425836 CCNL1Q9UK58 526 aaPredicted RBP32.15■■■□□ 2.74
VEGFA-209ENST00000425836 BTBD11A6QL63 1104 aa32.14■■■□□ 2.74
VEGFA-209ENST00000425836 LOC102724428A0A0B4J2F2 783 aa32.13■■■□□ 2.73
VEGFA-209ENST00000425836 SIK1P57059 783 aa32.13■■■□□ 2.73
VEGFA-209ENST00000425836 PTCD1O75127 700 aaKnown RBP32.11■■■□□ 2.73
VEGFA-209ENST00000425836 RBM42Q9BTD8 480 aaKnown RBP32.11■■■□□ 2.73
VEGFA-209ENST00000425836 ZNF790Q6PG37 636 aa32.11■■■□□ 2.73
VEGFA-209ENST00000425836 SLC4A9Q96Q91 983 aa32.11■■■□□ 2.73
VEGFA-209ENST00000425836 VIRMAQ69YN4 1812 aaKnown RBP32.1■■■□□ 2.73
VEGFA-209ENST00000425836 NCBP3Q53F19 620 aaKnown RBP32.1■■■□□ 2.73
VEGFA-209ENST00000425836 MIS18AQ9NYP9 233 aa32.1■■■□□ 2.73
VEGFA-209ENST00000425836 KCNQ3O43525 872 aa32.09■■■□□ 2.73
VEGFA-209ENST00000425836 CCDC27Q2M243 656 aa32.09■■■□□ 2.73
VEGFA-209ENST00000425836 LY75O60449 1722 aa32.08■■■□□ 2.73
VEGFA-209ENST00000425836 TTC5Q8N0Z6 440 aa32.08■■■□□ 2.73
VEGFA-209ENST00000425836 RREB1Q92766 1687 aa32.07■■■□□ 2.72
VEGFA-209ENST00000425836 SIPA1L3O60292 1781 aaPredicted RBP32.07■■■□□ 2.72
VEGFA-209ENST00000425836 ATP6V1AP38606 617 aa32.07■■■□□ 2.72
VEGFA-209ENST00000425836 SALL2Q9Y467 1007 aaPredicted RBP32.07■■■□□ 2.72
VEGFA-209ENST00000425836 ITPK1Q13572 414 aa32.05■■■□□ 2.72
VEGFA-209ENST00000425836 WWC1Q8IX03 1113 aa32.05■■■□□ 2.72
VEGFA-209ENST00000425836 ZNF496Q96IT1 587 aaPredicted RBP32.05■■■□□ 2.72
VEGFA-209ENST00000425836 PAPPAQ13219 1627 aa32.04■■■□□ 2.72
VEGFA-209ENST00000425836 KCPQ6ZWJ8 1503 aa32.03■■■□□ 2.72
VEGFA-209ENST00000425836 NBPF14Q5TI25 921 aa32.03■■■□□ 2.72
VEGFA-209ENST00000425836 ANO8Q9HCE9 1232 aaPredicted RBP32.03■■■□□ 2.72
VEGFA-209ENST00000425836 NUP188Q5SRE5 1749 aa32.02■■■□□ 2.72
VEGFA-209ENST00000425836 BABAM1Q9NWV8 329 aa32.02■■■□□ 2.72
VEGFA-209ENST00000425836 NGEFQ8N5V2 710 aa32.01■■■□□ 2.71
VEGFA-209ENST00000425836 CALD1Q05682 793 aaKnown RBP32■■■□□ 2.71
VEGFA-209ENST00000425836 LINC00116Q8NCU8 138 aa32■■■□□ 2.71
VEGFA-209ENST00000425836 FMNL2Q96PY5 1086 aa32■■■□□ 2.71
VEGFA-209ENST00000425836 TSPYL4Q9UJ04 414 aa32■■■□□ 2.71
VEGFA-209ENST00000425836 CHL1O00533 1208 aa31.99■■■□□ 2.71
VEGFA-209ENST00000425836 VSIG10Q8N0Z9 540 aa31.99■■■□□ 2.71
VEGFA-209ENST00000425836 LAS1LQ9Y4W2 734 aaKnown RBP31.99■■■□□ 2.71
VEGFA-209ENST00000425836 HMGB2P26583 209 aaKnown RBP31.98■■■□□ 2.71
VEGFA-209ENST00000425836 AKT1S1Q96B36 256 aa31.98■■■□□ 2.71
VEGFA-209ENST00000425836 HEG1Q9ULI3 1381 aa31.98■■■□□ 2.71
VEGFA-209ENST00000425836 ZNF827Q17R98 1081 aa31.98■■■□□ 2.71
VEGFA-209ENST00000425836 CFAP44Q96MT7 982 aa31.98■■■□□ 2.71
VEGFA-209ENST00000425836 STK32BQ9NY57 414 aa31.98■■■□□ 2.71
VEGFA-209ENST00000425836 ZNF853P0CG23 659 aa31.97■■■□□ 2.71
VEGFA-209ENST00000425836 DNAJC10Q8IXB1 793 aa31.97■■■□□ 2.71
VEGFA-209ENST00000425836 EIF4A1P60842 406 aaKnown RBP31.96■■■□□ 2.71
VEGFA-209ENST00000425836 SLC15A2Q16348 729 aa31.96■■■□□ 2.71
VEGFA-209ENST00000425836 IFT57Q9NWB7 429 aa31.95■■■□□ 2.71
VEGFA-209ENST00000425836 UBR2Q8IWV8 1755 aa31.94■■■□□ 2.7
VEGFA-209ENST00000425836 R3HDM1Q15032 1099 aaKnown RBP31.94■■■□□ 2.7
VEGFA-209ENST00000425836 ZNF831Q5JPB2 1677 aa31.93■■■□□ 2.7
VEGFA-209ENST00000425836 GNAI1P63096 354 aa31.93■■■□□ 2.7
VEGFA-209ENST00000425836 WDR63Q8IWG1 891 aa31.93■■■□□ 2.7
VEGFA-209ENST00000425836 SNRPA1P09661 255 aaKnown RBP31.91■■■□□ 2.7
VEGFA-209ENST00000425836 MBIPQ9NS73 344 aa31.91■■■□□ 2.7
VEGFA-209ENST00000425836 IL16Q14005 1332 aa31.91■■■□□ 2.7
VEGFA-209ENST00000425836 PSDA5PKW4 1024 aaPredicted RBP31.9■■■□□ 2.7
VEGFA-209ENST00000425836 CYP19A1P11511 503 aaPredicted RBP31.9■■■□□ 2.7
VEGFA-209ENST00000425836 ZNF521Q96K83 1311 aa31.9■■■□□ 2.7
VEGFA-209ENST00000425836 PRAMEF22A3QJZ6 481 aa31.9■■■□□ 2.7
VEGFA-209ENST00000425836 RC3H1Q5TC82 1133 aaKnown RBP31.9■■■□□ 2.7
VEGFA-209ENST00000425836 AK7Q96M32 723 aa31.9■■■□□ 2.7
VEGFA-209ENST00000425836 TEX13AQ9BXU3 409 aaPredicted RBP31.9■■■□□ 2.7
VEGFA-209ENST00000425836 TFCP2L1Q9NZI6 479 aa31.9■■■□□ 2.7
VEGFA-209ENST00000425836 KDM3BQ7LBC6 1761 aa31.89■■■□□ 2.7
VEGFA-209ENST00000425836 C5P01031 1676 aa31.89■■■□□ 2.7
VEGFA-209ENST00000425836 CNTNAP4Q9C0A0 1308 aa31.88■■■□□ 2.69
VEGFA-209ENST00000425836 CRKLP46109 303 aaKnown RBP31.88■■■□□ 2.69
VEGFA-209ENST00000425836 GIGYF1O75420 1035 aaPredicted RBP31.87■■■□□ 2.69
VEGFA-209ENST00000425836 USP16Q9Y5T5 823 aa31.87■■■□□ 2.69
VEGFA-209ENST00000425836 C4BP0C0L5 1744 aa31.87■■■□□ 2.69
VEGFA-209ENST00000425836 TJP1Q07157 1748 aa31.87■■■□□ 2.69
VEGFA-209ENST00000425836 STARD3NLO95772 234 aa31.86■■■□□ 2.69
VEGFA-209ENST00000425836 INTS5Q6P9B9 1019 aaKnown RBP31.86■■■□□ 2.69
VEGFA-209ENST00000425836 CICQ96RK0 1608 aaPredicted RBP31.86■■■□□ 2.69
VEGFA-209ENST00000425836 TAF1LQ8IZX4 1826 aa31.86■■■□□ 2.69
VEGFA-209ENST00000425836 GNPATO15228 680 aa31.85■■■□□ 2.69
VEGFA-209ENST00000425836 AMIGO3Q86WK7 504 aa31.85■■■□□ 2.69
VEGFA-209ENST00000425836 SPINK5Q9NQ38 1064 aaPredicted RBP31.84■■■□□ 2.69
VEGFA-209ENST00000425836 KRT24Q2M2I5 525 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms